EnhancerDB
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  3. vista24401[chr17:29820298-29820473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24401[chr17:29820298-29820473]
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Tissue distribution of vista24401
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Transcription factor that possibly regulate vista24401[chr17:29820298-29820473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29820222 29820483 SPI1 UCSC Txn Factor no Conserved 108249406
chr17 29820227 29820575 RUNX3 UCSC Txn Factor no Conserved 108249409
chr17 29820284 29820492 EGR1 UCSC Txn Factor no Conserved 108249420
chr17 29820311 29820329 IRF2 JASPAR yes 21218579
chr17 29820311 29820329 IRF2 JASPAR yes 53842257
chr17 29820314 29820329 PRDM1 JASPAR yes 21218580
chr17 29820314 29820329 PRDM1 JASPAR yes 53842258
chr17 29820315 29820329 SPIC JASPAR yes 21218581
chr17 29820315 29820329 SPIC JASPAR yes 53842259
chr17 29820336 29820350 SPI1 JASPAR yes 21218582
chr17 29820336 29820350 SPIC JASPAR yes 21218583
chr17 29820336 29820350 SPI1 JASPAR yes 53842260
chr17 29820336 29820350 SPIC JASPAR yes 53842261
chr17 29820340 29820347 SPIB JASPAR yes 21218584
chr17 29820340 29820347 SPIB JASPAR yes 53842262
chr17 29820341 29820349 EHF JASPAR yes 21218585
chr17 29820341 29820349 EHF JASPAR yes 53842263
chr17 29820377 29820382 SP1 TRANSFAC yes 21218586
chr17 29820377 29820382 SP1 TRANSFAC yes 53842264
chr17 29820378 29820383 SP1 TRANSFAC yes 21218587
chr17 29820378 29820383 SP1 TRANSFAC yes 53842265
chr17 29820400 29820411 RUNX1 JASPAR yes 21218588
chr17 29820400 29820411 RUNX1 JASPAR yes 53842266
chr17 29820406 29820410 ESR1 TRANSFAC yes 21218589
chr17 29820406 29820410 ESR1 TRANSFAC yes 53842267
chr17 29820408 29820423 NR2C2 JASPAR yes 21218590
chr17 29820408 29820423 NR2C2 JASPAR yes 53842268
chr17 29820409 29820419 ZNF740 JASPAR yes 21218591
chr17 29820409 29820419 ZNF740 JASPAR yes 53842269
chr17 29820413 29820423 SP1 JASPAR yes 21218592
chr17 29820413 29820423 SP1 TRANSFAC yes 21218593
chr17 29820413 29820423 SP1 JASPAR yes 53842270
chr17 29820413 29820423 SP1 TRANSFAC yes 53842271
chr17 29820414 29820424 SP1 JASPAR yes 21218594
chr17 29820414 29820424 SP1 JASPAR yes 53842272
chr17 29820414 29820429 ZIC3 JASPAR yes 21218595
chr17 29820414 29820429 ZIC3 JASPAR yes 53842273
chr17 29820448 29820462 STAT1 JASPAR yes 21218596
chr17 29820448 29820462 STAT1 JASPAR yes 53842274
chr17 29820462 29820466 YY1 TRANSFAC yes 21218597
chr17 29820462 29820466 YY1 TRANSFAC yes 53842275
SNP sites on vista24401[chr17:29820298-29820473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29820423 rs189670867 C A,G,T
EGR1 NR2C2 RUNX3 SP1 SPI1 ZIC3
4826040
Genes possibly regulated by vista24401[chr17:29820298-29820473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 22312
Expression level of Genes
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miRNAs possibly regulated by vista24401[chr17:29820298-29820473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results