EnhancerDB
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  3. vista24403[chr17:29867919-29868196]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24403[chr17:29867919-29868196]
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Tissue distribution of vista24403
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Transcription factor that possibly regulate vista24403[chr17:29867919-29868196]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29867920 29867935 LEF1 JASPAR yes 21218620
chr17 29867921 29867935 TCF7L2 JASPAR yes 21218621
chr17 29867924 29867930 LEF1 TRANSFAC yes 21218622
chr17 29867924 29867930 SOX10 JASPAR yes 21218623
chr17 29867925 29867937 FOXC2 JASPAR yes 21218624
chr17 29867926 29867937 FOXC1 JASPAR yes 21218625
chr17 29867945 29867960 SCRT1 JASPAR yes 21218626
chr17 29867947 29867960 SCRT2 JASPAR yes 21218627
chr17 29867949 29867955 PTF TRANSFAC yes 21218628
chr17 29867954 29867964 GSC2 JASPAR yes 21218629
chr17 29867954 29867964 GSC JASPAR yes 21218630
chr17 29867955 29867964 PITX3 JASPAR yes 21218631
chr17 29867970 29867981 USF1 JASPAR yes 21218632
chr17 29867972 29867985 JUN JASPAR yes 21218633
chr17 29867972 29867985 NR2F1 JASPAR yes 21218634
chr17 29867973 29867987 ATF7 JASPAR yes 21218635
chr17 29867974 29867986 JDP2 JASPAR yes 21218636
chr17 29867974 29867989 JUND JASPAR yes 21218637
chr17 29867975 29867988 JUN JASPAR yes 21218638
chr17 29867975 29867989 RORA JASPAR yes 21218639
chr17 29867976 29867984 CREB1 JASPAR yes 21218640
chr17 29867976 29867986 RORA JASPAR yes 21218641
chr17 29867982 29867986 YY1 TRANSFAC yes 21218642
chr17 29867986 29867989 MYB TRANSFAC yes 21218643
chr17 29867992 29867996 YY1 TRANSFAC yes 21218644
chr17 29868030 29868050 RREB1 JASPAR yes 21218645
chr17 29868035 29868055 RREB1 JASPAR yes 21218646
chr17 29868038 29868058 RREB1 JASPAR yes 21218647
chr17 29868042 29868062 RREB1 JASPAR yes 21218648
chr17 29868046 29868051 SP1 TRANSFAC yes 21218649
chr17 29868046 29868066 RREB1 JASPAR yes 21218650
chr17 29868047 29868059 ZBTB7B JASPAR yes 21218651
chr17 29868047 29868059 ZBTB7C JASPAR yes 21218652
chr17 29868048 29868060 ZBTB7A JASPAR yes 21218653
chr17 29868049 29868068 RFX2 JASPAR yes 21218654
chr17 29868058 29868068 SREBF1 JASPAR yes 21218655
chr17 29868094 29868100 MAZ TRANSFAC yes 21218656
chr17 29868098 29868112 XBP1 JASPAR yes 21218657
chr17 29868104 29868109 ATF1 TRANSFAC yes 21218658
chr17 29868117 29868121 YY1 TRANSFAC yes 21218659
chr17 29868143 29868154 EBF1 JASPAR yes 21218660
chr17 29868144 29868150 MZF1 JASPAR yes 21218661
chr17 29868145 29868154 TFAP2A JASPAR yes 21218662
chr17 29868149 29868155 SP1 TRANSFAC yes 21218663
chr17 29868150 29868155 SP1 TRANSFAC yes 21218664
chr17 29868153 29868159 ETS1 JASPAR yes 21218665
chr17 29868153 29868164 NFKB1 JASPAR yes 21218666
chr17 29868154 29868164 NFKB1 JASPAR yes 21218667
chr17 29868154 29868164 RELA JASPAR yes 21218668
chr17 29868154 29868164 REL JASPAR yes 21218669
chr17 29868166 29868177 STAT1 JASPAR yes 21218670
chr17 29868176 29868191 TFAP2C JASPAR yes 21218671
SNP sites on vista24403[chr17:29867919-29868196]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29868062 rs74669419 G A,C
RFX2 RREB1 SREBF1
4826344
chr17 29868140 rs4795616 G A no 4826345
Genes possibly regulated by vista24403[chr17:29867919-29868196]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 70035
Expression level of Genes
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miRNAs possibly regulated by vista24403[chr17:29867919-29868196]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 29887069 29887090 + hsa-miR-193a-3p MIMAT0000459 29886242 0.020785095040654785 0.863453 0.825577 690
Expression level of miRNAs
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