EnhancerDB
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  3. vista24405[chr17:29886835-29887094]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24405[chr17:29886835-29887094]
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Tissue distribution of vista24405
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Transcription factor that possibly regulate vista24405[chr17:29886835-29887094]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29886839 29886842 MYB TRANSFAC yes 21218801
chr17 29886839 29886842 MYB TRANSFAC yes 53845892
chr17 29886849 29886859 SP1 JASPAR yes 21218802
chr17 29886849 29886859 SP1 JASPAR yes 53845893
chr17 29886881 29886886 SP1 TRANSFAC yes 21218803
chr17 29886881 29886886 SP1 TRANSFAC yes 53845894
chr17 29886882 29886887 SP1 TRANSFAC yes 21218804
chr17 29886882 29886887 SP1 TRANSFAC yes 53845895
chr17 29886882 29886888 SP1 TRANSFAC yes 21218805
chr17 29886882 29886888 SP1 TRANSFAC yes 53845896
chr17 29886886 29886891 SP1 TRANSFAC yes 21218806
chr17 29886886 29886891 SP1 TRANSFAC yes 53845897
chr17 29886892 29886902 RELA JASPAR yes 21218807
chr17 29886892 29886902 REL JASPAR yes 21218808
chr17 29886892 29886902 RELA JASPAR yes 53845898
chr17 29886892 29886902 REL JASPAR yes 53845899
chr17 29886892 29886903 NFKB1 JASPAR yes 21218809
chr17 29886892 29886903 NFKB1 JASPAR yes 53845900
chr17 29886893 29886903 NFKB1 JASPAR yes 21218810
chr17 29886893 29886903 NFKB1 JASPAR yes 53845901
chr17 29886912 29886923 TFAP2A JASPAR yes 21218811
chr17 29886912 29886923 TFAP2B JASPAR yes 21218812
chr17 29886912 29886923 TFAP2C JASPAR yes 21218813
chr17 29886912 29886923 TFAP2A JASPAR yes 53845902
chr17 29886912 29886923 TFAP2B JASPAR yes 53845903
chr17 29886912 29886923 TFAP2C JASPAR yes 53845904
chr17 29886918 29886933 AR JASPAR yes 21218814
chr17 29886918 29886933 AR JASPAR yes 53845905
chr17 29886973 29886983 SP1 JASPAR yes 21218815
chr17 29886973 29886983 SP1 JASPAR yes 53845906
chr17 29886974 29886982 SP1 TRANSFAC yes 21218816
chr17 29886974 29886982 SP1 TRANSFAC yes 53845907
chr17 29886983 29886988 ETS2 TRANSFAC yes 21218817
chr17 29886983 29886988 ETS2 TRANSFAC yes 53845908
chr17 29886983 29886993 RELA JASPAR yes 21218818
chr17 29886983 29886993 RELA JASPAR yes 53845909
chr17 29886987 29887000 TFAP2A JASPAR yes 21218819
chr17 29886987 29887000 TFAP2B JASPAR yes 21218820
chr17 29886987 29887000 TFAP2C JASPAR yes 21218821
chr17 29886987 29887000 TFAP2A JASPAR yes 53845910
chr17 29886987 29887000 TFAP2B JASPAR yes 53845911
chr17 29886987 29887000 TFAP2C JASPAR yes 53845912
chr17 29887029 29887039 SP1 JASPAR yes 21218822
chr17 29887029 29887039 SP1 JASPAR yes 53845913
chr17 29887077 29887083 SOX10 JASPAR yes 21218823
chr17 29887077 29887083 SOX10 JASPAR yes 53845914
SNP sites on vista24405[chr17:29886835-29887094]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29886974 rs57370003 A G
SP1
4826534
chr17 29886980 rs138570870 C T
SP1
4826535
chr17 29887003 rs78197822 C T no 4826536
chr17 29887033 rs60406007 G T
SP1
4826537
Genes possibly regulated by vista24405[chr17:29886835-29887094]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 88933
Expression level of Genes
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miRNAs possibly regulated by vista24405[chr17:29886835-29887094]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results