EnhancerDB
  1. Home
  2. Enhancers
  3. vista24409[chr17:29907482-29908002]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24409[chr17:29907482-29908002]
Back to top
Tissue distribution of vista24409
Back to top
Transcription factor that possibly regulate vista24409[chr17:29907482-29908002]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29907609 29908009 FOS UCSC Txn Factor no Conserved 108249660
chr17 29907705 29907969 CEBPB UCSC Txn Factor no Conserved 108249666
chr17 29907878 29908394 TFAP2C UCSC Txn Factor no Conserved 108249669
chr17 29907506 29907510 YY1 TRANSFAC yes 21218915
chr17 29907506 29907510 YY1 TRANSFAC yes 53847166
chr17 29907509 29907523 TLX1 JASPAR yes 21218916
chr17 29907509 29907523 TLX1 JASPAR yes 53847167
chr17 29907512 29907517 MYC TRANSFAC yes 21218917
chr17 29907512 29907517 MYC TRANSFAC yes 53847168
chr17 29907517 29907535 IRF2 JASPAR yes 21218918
chr17 29907517 29907535 IRF2 JASPAR yes 53847169
chr17 29907518 29907539 IRF1 JASPAR yes 21218919
chr17 29907518 29907539 IRF1 JASPAR yes 53847170
chr17 29907520 29907535 PRDM1 JASPAR yes 21218920
chr17 29907520 29907535 STAT2 JASPAR yes 21218921
chr17 29907520 29907535 PRDM1 JASPAR yes 53847171
chr17 29907520 29907535 STAT2 JASPAR yes 53847172
chr17 29907521 29907535 STAT1 JASPAR yes 21218922
chr17 29907521 29907535 STAT1 JASPAR yes 53847173
chr17 29907522 29907534 IRF1 JASPAR yes 21218923
chr17 29907522 29907534 IRF1 JASPAR yes 53847174
chr17 29907522 29907536 IRF7 JASPAR yes 21218924
chr17 29907522 29907536 IRF7 JASPAR yes 53847175
chr17 29907522 29907537 IRF9 JASPAR yes 21218925
chr17 29907522 29907537 IRF9 JASPAR yes 53847176
chr17 29907527 29907531 YY1 TRANSFAC yes 21218926
chr17 29907527 29907531 YY1 TRANSFAC yes 53847177
chr17 29907527 29907537 ELK3 JASPAR yes 21218927
chr17 29907527 29907537 ERF JASPAR yes 21218928
chr17 29907527 29907537 ERG JASPAR yes 21218929
chr17 29907527 29907537 ETS1 JASPAR yes 21218930
chr17 29907527 29907537 ETV3 JASPAR yes 21218931
chr17 29907527 29907537 ETV4 JASPAR yes 21218932
chr17 29907527 29907537 FEV JASPAR yes 21218933
chr17 29907527 29907537 FLI1 JASPAR yes 21218934
chr17 29907527 29907537 ELK3 JASPAR yes 53847178
chr17 29907527 29907537 ERF JASPAR yes 53847179
chr17 29907527 29907537 ERG JASPAR yes 53847180
chr17 29907527 29907537 ETS1 JASPAR yes 53847181
chr17 29907527 29907537 ETV3 JASPAR yes 53847182
chr17 29907527 29907537 ETV4 JASPAR yes 53847183
chr17 29907527 29907537 FEV JASPAR yes 53847184
chr17 29907527 29907537 FLI1 JASPAR yes 53847185
chr17 29907527 29907538 ETV2 JASPAR yes 21218935
chr17 29907527 29907538 ETV2 JASPAR yes 53847186
chr17 29907529 29907535 ETS1 JASPAR yes 21218936
chr17 29907529 29907535 ETS1 JASPAR yes 53847187
chr17 29907534 29907555 REST JASPAR yes 21218937
chr17 29907534 29907555 REST JASPAR yes 53847188
chr17 29907535 29907554 REST JASPAR yes 21218938
chr17 29907535 29907554 REST JASPAR yes 53847189
chr17 29907538 29907542 NFE TRANSFAC yes 21218939
chr17 29907538 29907542 NFE TRANSFAC yes 53847190
chr17 29907548 29907559 NFE2L2 JASPAR yes 21218940
chr17 29907548 29907559 NFE2L2 JASPAR yes 53847191
chr17 29907551 29907562 BATF JASPAR yes 21218941
chr17 29907551 29907562 BATF JASPAR yes 53847192
chr17 29907556 29907571 LEF1 JASPAR yes 21218942
chr17 29907556 29907571 LEF1 JASPAR yes 53847193
chr17 29907557 29907571 TCF7L2 JASPAR yes 21218943
chr17 29907557 29907571 TCF7L2 JASPAR yes 53847194
chr17 29907570 29907574 YY1 TRANSFAC yes 21218944
chr17 29907570 29907574 YY1 TRANSFAC yes 53847195
chr17 29907571 29907582 CEBPB JASPAR yes 21218945
chr17 29907571 29907582 CEBPB JASPAR yes 53847196
chr17 29907648 29907659 FOXH1 JASPAR yes 21218946
chr17 29907648 29907659 FOXH1 JASPAR yes 53847197
chr17 29907657 29907672 NR2C2 JASPAR yes 21218947
chr17 29907657 29907672 NR2C2 JASPAR yes 53847198
chr17 29907676 29907697 MAFG JASPAR yes 21218948
chr17 29907676 29907697 MAFG JASPAR yes 53847199
chr17 29907698 29907708 EMX1 JASPAR yes 21218949
chr17 29907698 29907708 HOXB3 JASPAR yes 21218950
chr17 29907698 29907708 EMX1 JASPAR yes 53847200
chr17 29907698 29907708 HOXB3 JASPAR yes 53847201
chr17 29907701 29907705 YY1 TRANSFAC yes 21218951
chr17 29907701 29907705 YY1 TRANSFAC yes 53847202
chr17 29907713 29907725 POU3F1 JASPAR yes 21218952
chr17 29907713 29907725 POU3F1 JASPAR yes 53847203
chr17 29907715 29907724 POU3F4 JASPAR yes 21218953
chr17 29907715 29907724 POU3F4 JASPAR yes 53847204
chr17 29907717 29907729 BHLHE23 JASPAR yes 21218954
chr17 29907717 29907729 BHLHE23 JASPAR yes 53847205
chr17 29907718 29907728 BHLHE22 JASPAR yes 21218955
chr17 29907718 29907728 OLIG1 JASPAR yes 21218956
chr17 29907718 29907728 OLIG2 JASPAR yes 21218957
chr17 29907718 29907728 OLIG3 JASPAR yes 21218958
chr17 29907718 29907728 BHLHE22 JASPAR yes 53847206
chr17 29907718 29907728 OLIG1 JASPAR yes 53847207
chr17 29907718 29907728 OLIG2 JASPAR yes 53847208
chr17 29907718 29907728 OLIG3 JASPAR yes 53847209
chr17 29907751 29907761 MEF2A JASPAR yes 21218959
chr17 29907751 29907761 MEF2A JASPAR yes 53847210
chr17 29907757 29907765 DLX6 JASPAR yes 21218960
chr17 29907757 29907765 MSX2 JASPAR yes 21218961
chr17 29907757 29907765 DLX6 JASPAR yes 53847211
chr17 29907757 29907765 MSX2 JASPAR yes 53847212
chr17 29907771 29907775 ESR1 TRANSFAC yes 21218962
chr17 29907771 29907775 ESR1 TRANSFAC yes 53847213
chr17 29907778 29907796 MAFF JASPAR yes 21218963
chr17 29907778 29907796 MAFF JASPAR yes 53847214
chr17 29907780 29907795 MAFK JASPAR yes 21218964
chr17 29907780 29907795 MAFK JASPAR yes 53847215
chr17 29907799 29907812 NFKB1 JASPAR yes 21218965
chr17 29907799 29907812 NFKB2 JASPAR yes 21218966
chr17 29907799 29907812 NFKB1 JASPAR yes 53847216
chr17 29907799 29907812 NFKB2 JASPAR yes 53847217
chr17 29907800 29907810 NFKB1 JASPAR yes 21218967
chr17 29907800 29907810 NFKB1 JASPAR yes 53847218
chr17 29907800 29907811 NFKB1 JASPAR yes 21218968
chr17 29907800 29907811 NFKB1 JASPAR yes 53847219
chr17 29907804 29907810 NFE2 TRANSFAC yes 21218969
chr17 29907804 29907810 NFE2 TRANSFAC yes 53847220
chr17 29907812 29907826 JUN JASPAR yes 21218970
chr17 29907812 29907826 JUN JASPAR yes 53847221
chr17 29907815 29907826 FOSL2 JASPAR yes 21218971
chr17 29907815 29907826 JUNB JASPAR yes 21218972
chr17 29907815 29907826 FOSL2 JASPAR yes 53847222
chr17 29907815 29907826 JUNB JASPAR yes 53847223
chr17 29907816 29907827 FOS JASPAR yes 21218973
chr17 29907816 29907827 FOSL1 JASPAR yes 21218974
chr17 29907816 29907827 JUND JASPAR yes 21218975
chr17 29907816 29907827 NFE2 JASPAR yes 21218976
chr17 29907816 29907827 FOS JASPAR yes 53847224
chr17 29907816 29907827 FOSL1 JASPAR yes 53847225
chr17 29907816 29907827 JUND JASPAR yes 53847226
chr17 29907816 29907827 NFE2 JASPAR yes 53847227
chr17 29907817 29907826 JDP2 JASPAR yes 21218977
chr17 29907817 29907826 JDP2 JASPAR yes 53847228
chr17 29907817 29907828 FOSL2 JASPAR yes 21218978
chr17 29907817 29907828 JUNB JASPAR yes 21218979
chr17 29907817 29907828 FOSL2 JASPAR yes 53847229
chr17 29907817 29907828 JUNB JASPAR yes 53847230
chr17 29907817 29907831 JUN JASPAR yes 21218980
chr17 29907817 29907831 JUN JASPAR yes 53847231
chr17 29907817 29907837 PPARG JASPAR yes 21218981
chr17 29907817 29907837 PPARG JASPAR yes 53847232
chr17 29907818 29907829 BATF JASPAR yes 21218982
chr17 29907818 29907829 BATF JASPAR yes 53847233
chr17 29907840 29907844 H1TF2 TRANSFAC yes 21218983
chr17 29907840 29907844 NFE TRANSFAC yes 21218984
chr17 29907840 29907844 SRF TRANSFAC yes 21218985
chr17 29907840 29907844 H1TF2 TRANSFAC yes 53847234
chr17 29907840 29907844 NFE TRANSFAC yes 53847235
chr17 29907840 29907844 SRF TRANSFAC yes 53847236
chr17 29907875 29907887 NHLH1 JASPAR yes 21218986
chr17 29907875 29907887 NHLH1 JASPAR yes 53847237
chr17 29907875 29907888 ZBTB18 JASPAR yes 21218987
chr17 29907875 29907888 ZBTB18 JASPAR yes 53847238
chr17 29907876 29907886 NHLH1 JASPAR yes 21218988
chr17 29907876 29907886 NHLH1 JASPAR yes 53847239
chr17 29907881 29907890 THAP1 JASPAR yes 21218989
chr17 29907881 29907890 THAP1 JASPAR yes 53847240
chr17 29907882 29907894 TFAP2A JASPAR yes 21218990
chr17 29907882 29907894 TFAP2A JASPAR yes 53847241
chr17 29907882 29907899 RARA JASPAR yes 21218991
chr17 29907882 29907899 RXRA JASPAR yes 21218992
chr17 29907882 29907899 RARA JASPAR yes 53847242
chr17 29907882 29907899 RXRA JASPAR yes 53847243
chr17 29907904 29907913 PITX3 JASPAR yes 21218993
chr17 29907904 29907913 PITX3 JASPAR yes 53847244
chr17 29907904 29907914 GSC2 JASPAR yes 21218994
chr17 29907904 29907914 GSC JASPAR yes 21218995
chr17 29907904 29907914 GSC2 JASPAR yes 53847245
chr17 29907904 29907914 GSC JASPAR yes 53847246
chr17 29907905 29907913 OTX1 JASPAR yes 21218996
chr17 29907905 29907913 OTX1 JASPAR yes 53847247
chr17 29907908 29907921 ZBTB18 JASPAR yes 21218997
chr17 29907908 29907921 ZBTB18 JASPAR yes 53847248
chr17 29907909 29907921 NHLH1 JASPAR yes 21218998
chr17 29907909 29907921 NHLH1 JASPAR yes 53847249
chr17 29907910 29907920 NHLH1 JASPAR yes 21218999
chr17 29907910 29907920 NHLH1 JASPAR yes 53847250
chr17 29907916 29907925 HIC2 JASPAR yes 21219000
chr17 29907916 29907925 HIC2 JASPAR yes 53847251
chr17 29907917 29907935 ESR2 JASPAR yes 21219001
chr17 29907917 29907935 ESR2 JASPAR yes 53847252
chr17 29907919 29907923 LFA1 TRANSFAC yes 21219002
chr17 29907919 29907923 LFA1 TRANSFAC yes 53847253
chr17 29907929 29907947 E2F3 JASPAR yes 21219003
chr17 29907929 29907947 E2F3 JASPAR yes 53847254
chr17 29907930 29907946 E2F2 JASPAR yes 21219004
chr17 29907930 29907946 E2F2 JASPAR yes 53847255
chr17 29907940 29907944 YY1 TRANSFAC yes 21219005
chr17 29907940 29907944 YY1 TRANSFAC yes 53847256
chr17 29907982 29907994 TGIF2 JASPAR yes 21219006
chr17 29907982 29907994 TGIF2 JASPAR yes 53847257
chr17 29907983 29908003 ESR1 JASPAR yes 21219007
chr17 29907983 29908003 ESR1 JASPAR yes 53847258
chr17 29907988 29908003 ESR2 JASPAR yes 21219008
chr17 29907988 29908003 ESR2 JASPAR yes 53847259
SNP sites on vista24409[chr17:29907482-29908002]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29907520 rs74660009 C T
IRF1 IRF2 PRDM1 STAT2 TLX1
4826734
chr17 29907610 rs117538176 G A
FOS
4826735
chr17 29907779 rs570182875 A G
CEBPB FOS MAFF
4826736
chr17 29907913 rs371702605 C A,T
CEBPB FOS GSC GSC2 NHLH1 OTX1 PITX3 TFAP2C ZBTB18
4826737
Genes possibly regulated by vista24409[chr17:29907482-29908002]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 90679
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24409[chr17:29907482-29908002]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results