EnhancerDB
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  3. vista24410[chr17:29909272-29909544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24410[chr17:29909272-29909544]
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Tissue distribution of vista24410
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Transcription factor that possibly regulate vista24410[chr17:29909272-29909544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29909265 29909279 ZIC1 JASPAR yes 21219009
chr17 29909265 29909279 ZIC1 JASPAR yes 53847408
chr17 29909265 29909280 ZIC3 JASPAR yes 21219010
chr17 29909265 29909280 ZIC4 JASPAR yes 21219011
chr17 29909265 29909280 ZIC3 JASPAR yes 53847409
chr17 29909265 29909280 ZIC4 JASPAR yes 53847410
chr17 29909293 29909307 XBP1 JASPAR yes 21219012
chr17 29909293 29909307 XBP1 JASPAR yes 53847411
chr17 29909306 29909317 E2F6 JASPAR yes 21219013
chr17 29909306 29909317 E2F6 JASPAR yes 53847412
chr17 29909307 29909328 ZNF263 JASPAR yes 21219014
chr17 29909307 29909328 ZNF263 JASPAR yes 53847413
chr17 29909325 29909330 ETS2 TRANSFAC yes 21219015
chr17 29909325 29909330 ETS2 TRANSFAC yes 53847414
chr17 29909333 29909347 MTF1 JASPAR yes 21219016
chr17 29909333 29909347 MTF1 JASPAR yes 53847415
chr17 29909354 29909365 FLI1 JASPAR yes 21219017
chr17 29909354 29909365 FLI1 JASPAR yes 53847416
chr17 29909355 29909363 EHF JASPAR yes 21219018
chr17 29909355 29909363 EHF JASPAR yes 53847417
chr17 29909362 29909380 NFYA JASPAR yes 21219019
chr17 29909362 29909380 NFYA JASPAR yes 53847418
chr17 29909363 29909378 IRF9 JASPAR yes 21219020
chr17 29909363 29909378 IRF9 JASPAR yes 53847419
chr17 29909383 29909388 SP1 TRANSFAC yes 21219021
chr17 29909383 29909388 SP1 TRANSFAC yes 53847420
chr17 29909385 29909390 TFAP2A TRANSFAC yes 21219022
chr17 29909385 29909390 TFAP2A TRANSFAC yes 53847421
chr17 29909385 29909391 MZF1 JASPAR yes 21219023
chr17 29909385 29909391 MZF1 JASPAR yes 53847422
chr17 29909387 29909392 ETS2 TRANSFAC yes 21219024
chr17 29909387 29909392 ETS2 TRANSFAC yes 53847423
chr17 29909391 29909400 VENTX JASPAR yes 21219025
chr17 29909391 29909400 VENTX JASPAR yes 53847424
chr17 29909391 29909401 GBX1 JASPAR yes 21219026
chr17 29909391 29909401 GBX2 JASPAR yes 21219027
chr17 29909391 29909401 HOXB3 JASPAR yes 21219028
chr17 29909391 29909401 GBX1 JASPAR yes 53847425
chr17 29909391 29909401 GBX2 JASPAR yes 53847426
chr17 29909391 29909401 HOXB3 JASPAR yes 53847427
chr17 29909392 29909400 BARX1 JASPAR yes 21219029
chr17 29909392 29909400 EN1 JASPAR yes 21219030
chr17 29909392 29909400 ISL2 JASPAR yes 21219031
chr17 29909392 29909400 MSX1 JASPAR yes 21219032
chr17 29909392 29909400 MSX2 JASPAR yes 21219033
chr17 29909392 29909400 PDX1 JASPAR yes 21219034
chr17 29909392 29909400 BARX1 JASPAR yes 53847428
chr17 29909392 29909400 EN1 JASPAR yes 53847429
chr17 29909392 29909400 ISL2 JASPAR yes 53847430
chr17 29909392 29909400 MSX1 JASPAR yes 53847431
chr17 29909392 29909400 MSX2 JASPAR yes 53847432
chr17 29909392 29909400 PDX1 JASPAR yes 53847433
chr17 29909394 29909402 HOXA5 JASPAR yes 21219035
chr17 29909394 29909402 HOXA5 JASPAR yes 53847434
chr17 29909401 29909422 IRF1 JASPAR yes 21219036
chr17 29909401 29909422 IRF1 JASPAR yes 53847435
chr17 29909403 29909418 STAT2 JASPAR yes 21219037
chr17 29909403 29909418 STAT2 JASPAR yes 53847436
chr17 29909404 29909418 SPIC JASPAR yes 21219038
chr17 29909404 29909418 STAT1 JASPAR yes 21219039
chr17 29909404 29909418 SPIC JASPAR yes 53847437
chr17 29909404 29909418 STAT1 JASPAR yes 53847438
chr17 29909405 29909419 IRF7 JASPAR yes 21219040
chr17 29909405 29909419 IRF8 JASPAR yes 21219041
chr17 29909405 29909419 IRF7 JASPAR yes 53847439
chr17 29909405 29909419 IRF8 JASPAR yes 53847440
chr17 29909405 29909420 IRF9 JASPAR yes 21219042
chr17 29909405 29909420 IRF9 JASPAR yes 53847441
chr17 29909408 29909423 FOXP1 JASPAR yes 21219043
chr17 29909408 29909423 FOXP1 JASPAR yes 53847442
chr17 29909409 29909424 STAT2 JASPAR yes 21219044
chr17 29909409 29909424 STAT2 JASPAR yes 53847443
chr17 29909440 29909455 JUND JASPAR yes 21219045
chr17 29909440 29909455 JUND JASPAR yes 53847444
chr17 29909441 29909454 JUN JASPAR yes 21219046
chr17 29909441 29909454 JUN JASPAR yes 53847445
chr17 29909442 29909456 ATF7 JASPAR yes 21219047
chr17 29909442 29909456 ATF7 JASPAR yes 53847446
chr17 29909443 29909455 JDP2 JASPAR yes 21219048
chr17 29909443 29909455 JDP2 JASPAR yes 53847447
chr17 29909453 29909459 ETS1 JASPAR yes 21219049
chr17 29909453 29909459 ETS1 JASPAR yes 53847448
chr17 29909477 29909492 RUNX2 JASPAR yes 21219050
chr17 29909477 29909492 RUNX2 JASPAR yes 53847449
chr17 29909489 29909493 NFE TRANSFAC yes 21219051
chr17 29909489 29909493 NFE TRANSFAC yes 53847450
chr17 29909507 29909511 H1TF2 TRANSFAC yes 21219052
chr17 29909507 29909511 NFE TRANSFAC yes 21219053
chr17 29909507 29909511 SRF TRANSFAC yes 21219054
chr17 29909507 29909511 H1TF2 TRANSFAC yes 53847451
chr17 29909507 29909511 NFE TRANSFAC yes 53847452
chr17 29909507 29909511 SRF TRANSFAC yes 53847453
chr17 29909514 29909529 HSF1 JASPAR yes 21219055
chr17 29909514 29909529 HSF1 JASPAR yes 53847454
chr17 29909533 29909551 MAFF JASPAR yes 21219056
chr17 29909533 29909551 MAFF JASPAR yes 53847455
chr17 29909535 29909546 NRL JASPAR yes 21219057
chr17 29909535 29909546 NRL JASPAR yes 53847456
chr17 29909535 29909550 MAFK JASPAR yes 21219058
chr17 29909535 29909550 MAFK JASPAR yes 53847457
SNP sites on vista24410[chr17:29909272-29909544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29909428 rs223128 G T no 4826753
chr17 29909465 rs369579962 C G no 4826754
chr17 29909474 rs17181693 C T no 4826755
chr17 29909476 rs537864481 C T no 4826756
chr17 29909497 rs2034722 T C no 4826757
Genes possibly regulated by vista24410[chr17:29909272-29909544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 88889
Expression level of Genes
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miRNAs possibly regulated by vista24410[chr17:29909272-29909544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results