EnhancerDB
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  3. vista24420[chr17:30208094-30208307]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24420[chr17:30208094-30208307]
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Tissue distribution of vista24420
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Transcription factor that possibly regulate vista24420[chr17:30208094-30208307]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 30208151 30208161 SREBF2 JASPAR yes 21219443
chr17 30208162 30208181 PAX5 JASPAR yes 21219444
chr17 30208182 30208186 NFE TRANSFAC yes 21219445
chr17 30208186 30208201 FOXP1 JASPAR yes 21219446
chr17 30208187 30208202 FOXP1 JASPAR yes 21219447
chr17 30208188 30208203 FOXP1 JASPAR yes 21219448
chr17 30208189 30208204 FOXP1 JASPAR yes 21219449
chr17 30208195 30208206 FOXC1 JASPAR yes 21219450
chr17 30208205 30208209 YY1 TRANSFAC yes 21219451
chr17 30208205 30208216 CEBPB JASPAR yes 21219452
chr17 30208206 30208217 CEBPA JASPAR yes 21219453
chr17 30208207 30208218 STAT3 JASPAR yes 21219454
chr17 30208225 30208235 OLIG2 JASPAR yes 21219455
chr17 30208225 30208235 OLIG3 JASPAR yes 21219456
chr17 30208238 30208241 MYB TRANSFAC yes 21219457
chr17 30208258 30208276 NR3C1 JASPAR yes 21219458
chr17 30208269 30208283 RORA JASPAR yes 21219459
chr17 30208274 30208295 IRF1 JASPAR yes 21219460
chr17 30208276 30208291 PRDM1 JASPAR yes 21219461
chr17 30208278 30208290 IRF1 JASPAR yes 21219462
chr17 30208278 30208292 IRF7 JASPAR yes 21219463
chr17 30208278 30208293 IRF9 JASPAR yes 21219464
chr17 30208280 30208301 IRF1 JASPAR yes 21219465
chr17 30208282 30208297 PRDM1 JASPAR yes 21219466
chr17 30208282 30208297 STAT2 JASPAR yes 21219467
chr17 30208282 30208303 IRF1 JASPAR yes 21219468
chr17 30208283 30208304 IRF1 JASPAR yes 21219469
chr17 30208284 30208305 IRF1 JASPAR yes 21219470
chr17 30208285 30208300 FOXP1 JASPAR yes 21219471
chr17 30208285 30208306 IRF1 JASPAR yes 21219472
chr17 30208286 30208301 FOXP1 JASPAR yes 21219473
chr17 30208287 30208302 FOXP1 JASPAR yes 21219474
chr17 30208288 30208303 FOXP1 JASPAR yes 21219475
chr17 30208289 30208304 FOXP1 JASPAR yes 21219476
chr17 30208290 30208305 FOXP1 JASPAR yes 21219477
chr17 30208291 30208306 FOXP1 JASPAR yes 21219478
chr17 30208292 30208307 FOXP1 JASPAR yes 21219479
SNP sites on vista24420[chr17:30208094-30208307]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 30208149 rs139111920 C T no 4829028
chr17 30208188 rs377128220 T A
FOXP1
4829029
chr17 30208202 rs189984368 A T
FOXC1 FOXP1
4829030
chr17 30208270 rs8077817 T C
NR3C1 RORA
4829031
Genes possibly regulated by vista24420[chr17:30208094-30208307]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30178883 30186356 - COPRS ENSG00000172301.6 30186356 0.64 0.99 15626 78262
chr17 30187923 30228784 - UTP6 ENSG00000108651.5 30228784 0.8 0.99 15627 79523
chr17 30264037 30328064 + SUZ12 ENSG00000178691.6 30264037 0.72 0.98 15628 44270
Expression level of Genes
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miRNAs possibly regulated by vista24420[chr17:30208094-30208307]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results