EnhancerDB
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  3. vista24425[chr17:30593810-30594211]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24425[chr17:30593810-30594211]
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Tissue distribution of vista24425
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Transcription factor that possibly regulate vista24425[chr17:30593810-30594211]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 30593002 30594511 EZH2 UCSC Txn Factor no Conserved 108249917
chr17 30594073 30594358 RUNX3 UCSC Txn Factor no Conserved 108249931
chr17 30594123 30594252 SPI1 UCSC Txn Factor no Conserved 108249934
chr17 30593812 30593817 MYB TRANSFAC yes 21219702
chr17 30593830 30593836 SP1 TRANSFAC yes 21219703
chr17 30593830 30593840 SP1 JASPAR yes 21219704
chr17 30593832 30593847 NR2C2 JASPAR yes 21219705
chr17 30593835 30593848 NR2F1 JASPAR yes 21219706
chr17 30593850 30593871 ZNF263 JASPAR yes 21219707
chr17 30593881 30593887 TCF4 TRANSFAC yes 21219708
chr17 30593923 30593943 ESR1 JASPAR yes 21219709
chr17 30593928 30593948 ESR1 JASPAR yes 21219710
chr17 30593935 30593939 H4TF2 TRANSFAC yes 21219711
chr17 30593936 30593947 EBF1 JASPAR yes 21219712
chr17 30593950 30593961 E2F6 JASPAR yes 21219713
chr17 30593952 30593960 SP1 TRANSFAC yes 21219714
chr17 30593952 30593962 SP1 JASPAR yes 21219715
chr17 30593954 30593960 MAZ TRANSFAC yes 21219716
chr17 30593957 30593970 NFKB1 JASPAR yes 21219717
chr17 30593957 30593970 NFKB2 JASPAR yes 21219718
chr17 30593958 30593968 NFKB1 JASPAR yes 21219719
chr17 30593958 30593969 NFKB1 JASPAR yes 21219720
chr17 30593961 30593976 TFAP2A JASPAR yes 21219721
chr17 30593961 30593976 TFAP2C JASPAR yes 21219722
chr17 30593962 30593968 NFE2 TRANSFAC yes 21219723
chr17 30593963 30593976 TFAP2A JASPAR yes 21219724
chr17 30593963 30593976 TFAP2B JASPAR yes 21219725
chr17 30593963 30593976 TFAP2C JASPAR yes 21219726
chr17 30593963 30593978 TFAP2A JASPAR yes 21219727
chr17 30593963 30593978 TFAP2C JASPAR yes 21219728
chr17 30593969 30593982 NFKB2 JASPAR yes 21219729
chr17 30593970 30593981 NFKB1 JASPAR yes 21219730
chr17 30593974 30593985 E2F4 JASPAR yes 21219731
chr17 30593977 30593983 SP1 TRANSFAC yes 21219732
chr17 30593977 30593996 CTCF JASPAR yes 21219733
chr17 30594011 30594015 H4TF2 TRANSFAC yes 21219734
chr17 30594034 30594049 RFX5 JASPAR yes 21219735
chr17 30594061 30594064 MYB TRANSFAC yes 21219736
chr17 30594075 30594078 MYB TRANSFAC yes 21219737
chr17 30594077 30594097 TBX19 JASPAR yes 21219738
chr17 30594086 30594097 TBX20 JASPAR yes 21219739
chr17 30594089 30594106 RXRA JASPAR yes 21219740
chr17 30594101 30594105 LFA1 TRANSFAC yes 21219741
chr17 30594109 30594119 SP1 JASPAR yes 21219742
chr17 30594113 30594134 ZNF263 JASPAR yes 21219743
chr17 30594115 30594125 SP1 JASPAR yes 21219744
chr17 30594125 30594140 TFAP2C JASPAR yes 21219745
chr17 30594136 30594141 SP1 TRANSFAC yes 21219746
chr17 30594138 30594143 TFAP2A TRANSFAC yes 21219747
chr17 30594138 30594144 MZF1 JASPAR yes 21219748
chr17 30594140 30594155 STAT2 JASPAR yes 21219749
chr17 30594142 30594163 IRF1 JASPAR yes 21219750
chr17 30594144 30594159 IRF9 JASPAR yes 21219751
chr17 30594146 30594160 STAT1 JASPAR yes 21219752
chr17 30594146 30594161 PRDM1 JASPAR yes 21219753
chr17 30594146 30594161 STAT2 JASPAR yes 21219754
chr17 30594146 30594164 IRF2 JASPAR yes 21219755
chr17 30594147 30594159 IRF1 JASPAR yes 21219756
chr17 30594162 30594182 RREB1 JASPAR yes 21219757
chr17 30594163 30594183 RREB1 JASPAR yes 21219758
chr17 30594166 30594181 RUNX2 JASPAR yes 21219759
chr17 30594167 30594187 RREB1 JASPAR yes 21219760
chr17 30594181 30594192 E2F4 JASPAR yes 21219761
chr17 30594181 30594192 E2F6 JASPAR yes 21219762
chr17 30594183 30594191 E2F1 JASPAR yes 21219763
SNP sites on vista24425[chr17:30593810-30594211]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 30593863 rs7217877 C G
EZH2 ZNF263
4830249
chr17 30593893 rs113763464 G GA
EZH2
4830250
chr17 30593979 rs147693300 C T
CTCF E2F4 EZH2 NFKB1 NFKB2 SP1
4830251
chr17 30594092 rs530239645 GTGAAAAA G
EZH2 RUNX3 RXRA TBX19 TBX20
4830252
chr17 30594152 rs574843531 G A
EZH2 IRF1 IRF2 IRF9 PRDM1 RUNX3 SPI1 STAT1 STAT2
4830253
chr17 30594189 rs142385872 A G
E2F1 E2F4 E2F6 EZH2 RUNX3 SPI1
4830254
Genes possibly regulated by vista24425[chr17:30593810-30594211]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30506379 30506885 - AC116407.2 ENSG00000269402.1 30506885 0.69 1.0 15632 13075
chr17 30593195 30651680 + RHBDL3 ENSG00000141314.8 30593195 0.85 1.0 15633 99385
chr17 30651584 30677042 - C17orf75 ENSG00000108666.5 30677042 0.76 0.99 15634 17169
chr17 30677136 30708905 + ZNF207 ENSG00000010244.12 30677136 0.76 0.99 15635 17075
Expression level of Genes
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miRNAs possibly regulated by vista24425[chr17:30593810-30594211]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results