EnhancerDB
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  3. vista24427[chr17:30603137-30603481]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24427[chr17:30603137-30603481]
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Tissue distribution of vista24427
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Transcription factor that possibly regulate vista24427[chr17:30603137-30603481]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 30603270 30603519 SPI1 UCSC Txn Factor no Conserved 108249975
chr17 30603126 30603142 RFX3 JASPAR yes 21219804
chr17 30603126 30603142 RFX3 JASPAR yes 53879724
chr17 30603138 30603153 FOXP1 JASPAR yes 21219805
chr17 30603138 30603153 FOXP1 JASPAR yes 53879727
chr17 30603138 30603159 IRF1 JASPAR yes 21219806
chr17 30603138 30603159 IRF1 JASPAR yes 53879728
chr17 30603140 30603146 TBP TRANSFAC yes 21219807
chr17 30603140 30603146 TBP TRANSFAC yes 53879729
chr17 30603140 30603151 FOXC1 JASPAR yes 21219808
chr17 30603140 30603151 FOXC1 JASPAR yes 53879730
chr17 30603140 30603152 FOXC2 JASPAR yes 21219809
chr17 30603140 30603152 FOXC2 JASPAR yes 53879731
chr17 30603141 30603152 FOXP2 JASPAR yes 21219810
chr17 30603141 30603152 FOXP2 JASPAR yes 53879732
chr17 30603142 30603157 STAT2 JASPAR yes 21219811
chr17 30603142 30603157 STAT2 JASPAR yes 53879733
chr17 30603143 30603155 IRF1 JASPAR yes 21219812
chr17 30603143 30603155 IRF1 JASPAR yes 53879734
chr17 30603143 30603158 FOXP1 JASPAR yes 21219813
chr17 30603143 30603158 FOXP1 JASPAR yes 53879735
chr17 30603149 30603170 IRF1 JASPAR yes 21219814
chr17 30603149 30603170 IRF1 JASPAR yes 53879736
chr17 30603151 30603166 IRF9 JASPAR yes 21219815
chr17 30603151 30603166 IRF9 JASPAR yes 53879737
chr17 30603152 30603166 IRF8 JASPAR yes 21219816
chr17 30603152 30603166 IRF8 JASPAR yes 53879738
chr17 30603153 30603171 IRF2 JASPAR yes 21219817
chr17 30603153 30603171 IRF2 JASPAR yes 53879739
chr17 30603169 30603173 YY1 TRANSFAC yes 21219818
chr17 30603169 30603173 YY1 TRANSFAC yes 53879740
chr17 30603182 30603197 NR2C2 JASPAR yes 21219819
chr17 30603182 30603197 NR2C2 JASPAR yes 53879741
chr17 30603182 30603200 RARA JASPAR yes 21219820
chr17 30603182 30603200 RARA JASPAR yes 53879742
chr17 30603183 30603197 RXRB JASPAR yes 21219821
chr17 30603183 30603197 RXRG JASPAR yes 21219822
chr17 30603183 30603197 RXRB JASPAR yes 53879743
chr17 30603183 30603197 RXRG JASPAR yes 53879744
chr17 30603183 30603198 HNF4A JASPAR yes 21219823
chr17 30603183 30603198 HNF4A JASPAR yes 53879745
chr17 30603187 30603197 RORA JASPAR yes 21219824
chr17 30603187 30603197 RORA JASPAR yes 53879746
chr17 30603188 30603199 ESRRA JASPAR yes 21219825
chr17 30603188 30603199 ESRRA JASPAR yes 53879747
chr17 30603188 30603201 NR2F1 JASPAR yes 21219826
chr17 30603188 30603201 NR2F1 JASPAR yes 53879748
chr17 30603190 30603198 NR4A2 JASPAR yes 21219827
chr17 30603190 30603198 NR4A2 JASPAR yes 53879749
chr17 30603191 30603208 RARA JASPAR yes 21219828
chr17 30603191 30603208 RXRA JASPAR yes 21219829
chr17 30603191 30603208 RARA JASPAR yes 53879750
chr17 30603191 30603208 RXRA JASPAR yes 53879751
chr17 30603192 30603196 ESR1 TRANSFAC yes 21219830
chr17 30603192 30603196 ESR1 TRANSFAC yes 53879752
chr17 30603196 30603217 ZNF263 JASPAR yes 21219831
chr17 30603196 30603217 ZNF263 JASPAR yes 53879753
chr17 30603198 30603203 ETS2 TRANSFAC yes 21219832
chr17 30603198 30603203 ETS2 TRANSFAC yes 53879754
chr17 30603198 30603218 RREB1 JASPAR yes 21219833
chr17 30603198 30603218 RREB1 JASPAR yes 53879755
chr17 30603245 30603264 RFX2 JASPAR yes 21219834
chr17 30603245 30603264 RFX2 JASPAR yes 53879756
chr17 30603249 30603258 HIC2 JASPAR yes 21219835
chr17 30603249 30603258 HIC2 JASPAR yes 53879757
chr17 30603249 30603265 RFX2 JASPAR yes 21219836
chr17 30603249 30603265 RFX3 JASPAR yes 21219837
chr17 30603249 30603265 RFX4 JASPAR yes 21219838
chr17 30603249 30603265 RFX5 JASPAR yes 21219839
chr17 30603249 30603265 RFX2 JASPAR yes 53879758
chr17 30603249 30603265 RFX3 JASPAR yes 53879759
chr17 30603249 30603265 RFX4 JASPAR yes 53879760
chr17 30603249 30603265 RFX5 JASPAR yes 53879761
chr17 30603250 30603259 NFIX JASPAR yes 21219840
chr17 30603250 30603259 NFIX JASPAR yes 53879762
chr17 30603251 30603257 NFIC JASPAR yes 21219841
chr17 30603251 30603257 NFIC JASPAR yes 53879763
chr17 30603261 30603276 FOXP1 JASPAR yes 21219842
chr17 30603261 30603276 FOXP1 JASPAR yes 53879764
chr17 30603264 30603275 FOXP2 JASPAR yes 21219843
chr17 30603264 30603275 FOXP2 JASPAR yes 53879765
chr17 30603273 30603294 IRF1 JASPAR yes 21219844
chr17 30603273 30603294 IRF1 JASPAR yes 53879766
chr17 30603278 30603289 CEBPA JASPAR yes 21219845
chr17 30603278 30603289 CEBPA JASPAR yes 53879767
chr17 30603293 30603297 YY1 TRANSFAC yes 21219846
chr17 30603293 30603297 YY1 TRANSFAC yes 53879768
chr17 30603306 30603324 RARA JASPAR yes 21219847
chr17 30603306 30603324 RARA JASPAR yes 53879769
chr17 30603313 30603327 TCF7L2 JASPAR yes 21219848
chr17 30603313 30603327 TCF7L2 JASPAR yes 53879770
chr17 30603313 30603328 LEF1 JASPAR yes 21219849
chr17 30603313 30603328 LEF1 JASPAR yes 53879771
chr17 30603322 30603327 ETS2 TRANSFAC yes 21219850
chr17 30603322 30603327 ETS2 TRANSFAC yes 53879772
chr17 30603322 30603342 RREB1 JASPAR yes 21219851
chr17 30603322 30603342 RREB1 JASPAR yes 53879773
chr17 30603326 30603336 TBX21 JASPAR yes 21219852
chr17 30603326 30603336 TBX21 JASPAR yes 53879774
chr17 30603326 30603337 TBX20 JASPAR yes 21219853
chr17 30603326 30603337 TBX20 JASPAR yes 53879775
chr17 30603327 30603335 MGA JASPAR yes 21219854
chr17 30603327 30603335 TBX15 JASPAR yes 21219855
chr17 30603327 30603335 TBX1 JASPAR yes 21219856
chr17 30603327 30603335 TBX4 JASPAR yes 21219857
chr17 30603327 30603335 TBX5 JASPAR yes 21219858
chr17 30603327 30603335 MGA JASPAR yes 53879776
chr17 30603327 30603335 TBX15 JASPAR yes 53879777
chr17 30603327 30603335 TBX1 JASPAR yes 53879778
chr17 30603327 30603335 TBX4 JASPAR yes 53879779
chr17 30603327 30603335 TBX5 JASPAR yes 53879780
chr17 30603354 30603367 POU3F3 JASPAR yes 21219859
chr17 30603354 30603367 POU3F3 JASPAR yes 53879781
chr17 30603355 30603367 POU2F1 JASPAR yes 21219860
chr17 30603355 30603367 POU2F1 JASPAR yes 53879782
chr17 30603356 30603365 POU5F1B JASPAR yes 21219861
chr17 30603356 30603365 POU5F1B JASPAR yes 53879783
chr17 30603359 30603373 SPI1 JASPAR yes 21219862
chr17 30603359 30603373 SPI1 JASPAR yes 53879784
chr17 30603366 30603383 BCL6B JASPAR yes 21219863
chr17 30603366 30603383 BCL6B JASPAR yes 53879785
chr17 30603367 30603371 YY1 TRANSFAC yes 21219864
chr17 30603367 30603371 YY1 TRANSFAC yes 53879786
chr17 30603375 30603389 SPI1 JASPAR yes 21219865
chr17 30603375 30603389 SPI1 JASPAR yes 53879787
chr17 30603377 30603398 ZNF263 JASPAR yes 21219866
chr17 30603377 30603398 ZNF263 JASPAR yes 53879788
chr17 30603411 30603414 MYB TRANSFAC yes 21219867
chr17 30603411 30603414 MYB TRANSFAC yes 53879789
chr17 30603419 30603432 NR2F1 JASPAR yes 21219868
chr17 30603419 30603432 NR2F1 JASPAR yes 53879790
chr17 30603421 30603432 ESRRA JASPAR yes 21219869
chr17 30603421 30603432 ESRRB JASPAR yes 21219870
chr17 30603421 30603432 ESRRA JASPAR yes 53879791
chr17 30603421 30603432 ESRRB JASPAR yes 53879792
chr17 30603422 30603430 NR4A2 JASPAR yes 21219871
chr17 30603422 30603430 NR4A2 JASPAR yes 53879793
chr17 30603428 30603434 NFIC JASPAR yes 21219872
chr17 30603428 30603434 NFIC JASPAR yes 53879794
chr17 30603430 30603440 NHLH1 JASPAR yes 21219873
chr17 30603430 30603440 NHLH1 JASPAR yes 53879795
chr17 30603443 30603457 RORA JASPAR yes 21219874
chr17 30603443 30603457 RORA JASPAR yes 53879796
chr17 30603468 30603473 GATA2 JASPAR yes 21219875
chr17 30603468 30603473 GATA2 JASPAR yes 53879797
chr17 30603473 30603479 TCF4 TRANSFAC yes 21219876
chr17 30603473 30603479 TCF4 TRANSFAC yes 53879798
chr17 30603477 30603492 HNF4G JASPAR yes 21219877
chr17 30603477 30603492 HNF4G JASPAR yes 53879799
chr17 30603478 30603492 NR2F1 JASPAR yes 21219878
chr17 30603478 30603492 NR2F1 JASPAR yes 53879800
chr17 30603478 30603493 HNF4A JASPAR yes 21219879
chr17 30603478 30603493 HNF4A JASPAR yes 53879801
SNP sites on vista24427[chr17:30603137-30603481]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 30603154 rs7219312 C A
FOXP1 IRF1 IRF2 IRF8 IRF9 STAT2
4830346
chr17 30603203 rs58336350 A C,T
ETS2 RARA RREB1 RXRA ZNF263
4830347
chr17 30603236 rs531244694 C A no 4830348
chr17 30603261 rs539205863 GAACAAAAA G
FOXP1 RFX2 RFX3 RFX4 RFX5
4830349
chr17 30603318 rs12450124 A G
LEF1 RARA SPI1 TCF7L2
4830350
Genes possibly regulated by vista24427[chr17:30603137-30603481]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30506379 30506885 - AC116407.2 ENSG00000269402.1 30506885 0.69 1.0 15632 3748
chr17 30593195 30651680 + RHBDL3 ENSG00000141314.8 30593195 0.85 1.0 15633 90058
chr17 30651584 30677042 - C17orf75 ENSG00000108666.5 30677042 0.76 0.99 15634 26439
chr17 30677136 30708905 + ZNF207 ENSG00000010244.12 30677136 0.76 0.99 15635 26345
Expression level of Genes
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miRNAs possibly regulated by vista24427[chr17:30603137-30603481]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results