EnhancerDB
  1. Home
  2. Enhancers
  3. vista24440[chr17:30886393-30886627]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24440[chr17:30886393-30886627]
Back to top
Tissue distribution of vista24440
Back to top
Transcription factor that possibly regulate vista24440[chr17:30886393-30886627]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 30886390 30886666 USF2 UCSC Txn Factor no Conserved 108250300
chr17 30886385 30886395 ETV3 JASPAR yes 21220532
chr17 30886385 30886395 ETV3 JASPAR yes 53890396
chr17 30886397 30886414 ZNF410 JASPAR yes 21220533
chr17 30886397 30886414 ZNF410 JASPAR yes 53890397
chr17 30886454 30886464 TFAP4 JASPAR yes 21220534
chr17 30886454 30886464 TFAP4 JASPAR yes 53890398
chr17 30886463 30886478 NFYB JASPAR yes 21220535
chr17 30886463 30886478 NFYB JASPAR yes 53890399
chr17 30886465 30886481 NFYA JASPAR yes 21220536
chr17 30886465 30886481 NFYA JASPAR yes 53890400
chr17 30886466 30886484 NFYA JASPAR yes 21220537
chr17 30886466 30886484 NFYA JASPAR yes 53890401
chr17 30886470 30886474 H1TF2 TRANSFAC yes 21220538
chr17 30886470 30886474 NFE TRANSFAC yes 21220539
chr17 30886470 30886474 SRF TRANSFAC yes 21220540
chr17 30886470 30886474 H1TF2 TRANSFAC yes 53890402
chr17 30886470 30886474 NFE TRANSFAC yes 53890403
chr17 30886470 30886474 SRF TRANSFAC yes 53890404
chr17 30886475 30886484 SNAI2 JASPAR yes 21220541
chr17 30886475 30886484 SNAI2 JASPAR yes 53890405
chr17 30886475 30886485 FIGLA JASPAR yes 21220542
chr17 30886475 30886485 ID4 JASPAR yes 21220543
chr17 30886475 30886485 MSC JASPAR yes 21220544
chr17 30886475 30886485 TCF3 JASPAR yes 21220545
chr17 30886475 30886485 TCF4 JASPAR yes 21220546
chr17 30886475 30886485 FIGLA JASPAR yes 53890406
chr17 30886475 30886485 ID4 JASPAR yes 53890407
chr17 30886475 30886485 MSC JASPAR yes 53890408
chr17 30886475 30886485 TCF3 JASPAR yes 53890409
chr17 30886475 30886485 TCF4 JASPAR yes 53890410
chr17 30886483 30886493 TFAP4 JASPAR yes 21220547
chr17 30886483 30886493 TFAP4 JASPAR yes 53890411
chr17 30886497 30886508 ESRRA JASPAR yes 21220548
chr17 30886497 30886508 ESRRB JASPAR yes 21220549
chr17 30886497 30886508 ESRRA JASPAR yes 53890412
chr17 30886497 30886508 ESRRB JASPAR yes 53890413
chr17 30886497 30886510 NR2F1 JASPAR yes 21220550
chr17 30886497 30886510 NR2F1 JASPAR yes 53890414
chr17 30886498 30886516 SRF JASPAR yes 21220551
chr17 30886498 30886516 SRF JASPAR yes 53890415
chr17 30886499 30886507 NR4A2 JASPAR yes 21220552
chr17 30886499 30886507 NR4A2 JASPAR yes 53890416
chr17 30886500 30886517 RARA JASPAR yes 21220553
chr17 30886500 30886517 RXRA JASPAR yes 21220554
chr17 30886500 30886517 RARA JASPAR yes 53890417
chr17 30886500 30886517 RXRA JASPAR yes 53890418
chr17 30886501 30886505 ESR1 TRANSFAC yes 21220555
chr17 30886501 30886505 ESR1 TRANSFAC yes 53890419
chr17 30886510 30886520 MAX JASPAR yes 21220556
chr17 30886510 30886520 MAX JASPAR yes 53890420
chr17 30886519 30886529 TFAP4 JASPAR yes 21220557
chr17 30886519 30886529 TFAP4 JASPAR yes 53890421
chr17 30886530 30886534 H1TF2 TRANSFAC yes 21220558
chr17 30886530 30886534 NFE TRANSFAC yes 21220559
chr17 30886530 30886534 SRF TRANSFAC yes 21220560
chr17 30886530 30886534 H1TF2 TRANSFAC yes 53890422
chr17 30886530 30886534 NFE TRANSFAC yes 53890423
chr17 30886530 30886534 SRF TRANSFAC yes 53890424
chr17 30886532 30886545 ZBTB18 JASPAR yes 21220561
chr17 30886532 30886545 ZBTB18 JASPAR yes 53890425
chr17 30886533 30886545 NHLH1 JASPAR yes 21220562
chr17 30886533 30886545 NHLH1 JASPAR yes 53890426
chr17 30886534 30886544 MSC JASPAR yes 21220563
chr17 30886534 30886544 MSC JASPAR yes 53890427
chr17 30886553 30886567 SPI1 JASPAR yes 21220564
chr17 30886553 30886567 SPI1 JASPAR yes 53890428
chr17 30886563 30886584 IRF1 JASPAR yes 21220565
chr17 30886563 30886584 IRF1 JASPAR yes 53890429
chr17 30886569 30886590 IRF1 JASPAR yes 21220566
chr17 30886569 30886590 IRF1 JASPAR yes 53890430
chr17 30886571 30886586 PRDM1 JASPAR yes 21220567
chr17 30886571 30886586 STAT2 JASPAR yes 21220568
chr17 30886571 30886586 PRDM1 JASPAR yes 53890431
chr17 30886571 30886586 STAT2 JASPAR yes 53890432
chr17 30886572 30886586 STAT1 JASPAR yes 21220569
chr17 30886572 30886586 STAT1 JASPAR yes 53890433
chr17 30886573 30886587 IRF7 JASPAR yes 21220570
chr17 30886573 30886587 IRF8 JASPAR yes 21220571
chr17 30886573 30886587 IRF7 JASPAR yes 53890434
chr17 30886573 30886587 IRF8 JASPAR yes 53890435
chr17 30886573 30886588 IRF9 JASPAR yes 21220572
chr17 30886573 30886588 IRF9 JASPAR yes 53890436
chr17 30886584 30886588 NFE TRANSFAC yes 21220573
chr17 30886584 30886588 NFE TRANSFAC yes 53890437
chr17 30886585 30886599 FOXF2 JASPAR yes 21220574
chr17 30886585 30886599 FOXF2 JASPAR yes 53890438
chr17 30886590 30886598 FOXG1 JASPAR yes 21220575
chr17 30886590 30886598 FOXG1 JASPAR yes 53890439
chr17 30886595 30886599 YY1 TRANSFAC yes 21220576
chr17 30886595 30886599 YY1 TRANSFAC yes 53890440
chr17 30886602 30886616 CREB3L1 JASPAR yes 21220577
chr17 30886602 30886616 CREB3L1 JASPAR yes 53890441
chr17 30886604 30886614 NEUROD2 JASPAR yes 21220578
chr17 30886604 30886614 NEUROD2 JASPAR yes 53890442
chr17 30886604 30886615 USF2 JASPAR yes 21220579
chr17 30886604 30886615 USF2 JASPAR yes 53890443
chr17 30886605 30886615 MAX JASPAR yes 21220580
chr17 30886605 30886615 MAX JASPAR yes 53890444
SNP sites on vista24440[chr17:30886393-30886627]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 30886516 rs184578090 C T
MAX RARA RXRA SRF USF2
4831628
chr17 30886519 rs147966473 G A
MAX TFAP4 USF2
4831629
chr17 30886566 rs73981831 G C
IRF1 SPI1 USF2
4831630
chr17 30886568 rs115729097 A G
IRF1 USF2
4831631
chr17 30886597 rs73981832 A G
FOXF2 FOXG1 USF2 YY1
4831632
Genes possibly regulated by vista24440[chr17:30886393-30886627]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30813637 30818274 + CDK5R1 ENSG00000176749.4 30813637 0.92 1.0 15637 27244
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24440[chr17:30886393-30886627]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results