EnhancerDB
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  3. vista24452[chr17:31224473-31224751]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24452[chr17:31224473-31224751]
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Tissue distribution of vista24452
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Transcription factor that possibly regulate vista24452[chr17:31224473-31224751]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 31224299 31225068 POLR2A UCSC Txn Factor no Conserved 108250430
chr17 31224341 31224891 GATA2 UCSC Txn Factor no Conserved 108250432
chr17 31224423 31224882 GATA1 UCSC Txn Factor no Conserved 108250438
chr17 31224447 31224797 STAT5A UCSC Txn Factor no Conserved 108250443
chr17 31224493 31224690 USF1 UCSC Txn Factor no Conserved 108250455
chr17 31224497 31224777 TEAD4 UCSC Txn Factor no Conserved 108250458
chr17 31224505 31224755 TAL1 UCSC Txn Factor no Conserved 108250461
chr17 31224572 31224718 EP300 UCSC Txn Factor no Conserved 108250471
chr17 31224479 31224489 GSC2 JASPAR yes 21221037
chr17 31224479 31224489 GSC2 JASPAR yes 53909527
chr17 31224480 31224488 OTX2 JASPAR yes 21221038
chr17 31224480 31224488 OTX2 JASPAR yes 53909528
chr17 31224503 31224514 STAT1 JASPAR yes 21221039
chr17 31224503 31224514 STAT3 JASPAR yes 21221040
chr17 31224503 31224514 STAT1 JASPAR yes 53909529
chr17 31224503 31224514 STAT3 JASPAR yes 53909530
chr17 31224511 31224521 MSC JASPAR yes 21221041
chr17 31224511 31224521 MSC JASPAR yes 53909531
chr17 31224518 31224522 YY1 TRANSFAC yes 21221042
chr17 31224518 31224522 YY1 TRANSFAC yes 53909532
chr17 31224520 31224530 HOXC10 JASPAR yes 21221043
chr17 31224520 31224530 HOXD11 JASPAR yes 21221044
chr17 31224520 31224530 HOXC10 JASPAR yes 53909533
chr17 31224520 31224530 HOXD11 JASPAR yes 53909534
chr17 31224520 31224531 HOXA10 JASPAR yes 21221045
chr17 31224520 31224531 HOXC12 JASPAR yes 21221046
chr17 31224520 31224531 HOXA10 JASPAR yes 53909535
chr17 31224520 31224531 HOXC12 JASPAR yes 53909536
chr17 31224544 31224547 MYB TRANSFAC yes 21221047
chr17 31224544 31224547 MYB TRANSFAC yes 53909537
chr17 31224547 31224551 YY1 TRANSFAC yes 21221048
chr17 31224547 31224551 YY1 TRANSFAC yes 53909538
chr17 31224560 31224568 HOXA5 JASPAR yes 21221049
chr17 31224560 31224568 HOXA5 JASPAR yes 53909539
chr17 31224566 31224578 PKNOX1 JASPAR yes 21221050
chr17 31224566 31224578 PKNOX2 JASPAR yes 21221051
chr17 31224566 31224578 PKNOX1 JASPAR yes 53909540
chr17 31224566 31224578 PKNOX2 JASPAR yes 53909541
chr17 31224566 31224586 TP63 JASPAR yes 21221052
chr17 31224566 31224586 TP63 JASPAR yes 53909542
chr17 31224567 31224585 TP53 JASPAR yes 21221053
chr17 31224567 31224585 TP63 JASPAR yes 21221054
chr17 31224567 31224585 TP73 JASPAR yes 21221055
chr17 31224567 31224585 TP53 JASPAR yes 53909543
chr17 31224567 31224585 TP63 JASPAR yes 53909544
chr17 31224567 31224585 TP73 JASPAR yes 53909545
chr17 31224568 31224583 TP53 JASPAR yes 21221056
chr17 31224568 31224583 TP53 JASPAR yes 53909546
chr17 31224569 31224580 DMRT3 JASPAR yes 21221057
chr17 31224569 31224580 DMRT3 JASPAR yes 53909547
chr17 31224569 31224584 TP53 JASPAR yes 21221058
chr17 31224569 31224584 TP53 JASPAR yes 53909548
chr17 31224573 31224588 SCRT1 JASPAR yes 21221059
chr17 31224573 31224588 SCRT1 JASPAR yes 53909549
chr17 31224577 31224588 USF2 JASPAR yes 21221060
chr17 31224577 31224588 USF2 JASPAR yes 53909550
chr17 31224578 31224588 MAX JASPAR yes 21221061
chr17 31224578 31224588 MAX JASPAR yes 53909551
chr17 31224608 31224614 NFIC JASPAR yes 21221062
chr17 31224608 31224614 NFIC JASPAR yes 53909552
chr17 31224610 31224614 H1TF2 TRANSFAC yes 21221063
chr17 31224610 31224614 NFE TRANSFAC yes 21221064
chr17 31224610 31224614 SRF TRANSFAC yes 21221065
chr17 31224610 31224614 H1TF2 TRANSFAC yes 53909553
chr17 31224610 31224614 NFE TRANSFAC yes 53909554
chr17 31224610 31224614 SRF TRANSFAC yes 53909555
chr17 31224622 31224632 SP1 JASPAR yes 21221066
chr17 31224622 31224632 SP1 JASPAR yes 53909556
chr17 31224625 31224646 ZNF263 JASPAR yes 21221067
chr17 31224625 31224646 ZNF263 JASPAR yes 53909557
chr17 31224628 31224634 PEA3 TRANSFAC yes 21221068
chr17 31224628 31224634 PEA3 TRANSFAC yes 53909558
chr17 31224656 31224670 GATA2 JASPAR yes 21221069
chr17 31224656 31224670 GATA2 JASPAR yes 53909559
chr17 31224658 31224666 GATA3 JASPAR yes 21221070
chr17 31224658 31224666 GATA5 JASPAR yes 21221071
chr17 31224658 31224666 GATA3 JASPAR yes 53909560
chr17 31224658 31224666 GATA5 JASPAR yes 53909561
chr17 31224677 31224682 TFAP2A TRANSFAC yes 21221072
chr17 31224677 31224682 TFAP2A TRANSFAC yes 53909562
chr17 31224677 31224683 MZF1 JASPAR yes 21221073
chr17 31224677 31224683 MZF1 JASPAR yes 53909563
chr17 31224698 31224703 GATA2 JASPAR yes 21221074
chr17 31224698 31224703 GATA2 JASPAR yes 53909564
chr17 31224750 31224771 ZNF263 JASPAR yes 21221075
chr17 31224750 31224771 ZNF263 JASPAR yes 53909565
SNP sites on vista24452[chr17:31224473-31224751]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 31224488 rs35976896 G C
GATA1 GATA2 GSC2 OTX2 POLR2A STAT5A
4833145
chr17 31224492 rs116605740 G A
GATA1 GATA2 POLR2A STAT5A
4833146
chr17 31224599 rs147828526 C T
EP300 GATA1 GATA2 POLR2A STAT5A TAL1 TEAD4 USF1
4833147
chr17 31224656 rs115196251 C T
EP300 GATA1 GATA2 POLR2A STAT5A TAL1 TEAD4 USF1
4833148
chr17 31224665 rs139637292 G A
EP300 GATA1 GATA2 GATA3 GATA5 POLR2A STAT5A TAL1 TEAD4 USF1
4833149
chr17 31224688 rs62070228 C A,G
EP300 GATA1 GATA2 POLR2A STAT5A TAL1 TEAD4 USF1
4833150
Genes possibly regulated by vista24452[chr17:31224473-31224751]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30819540 31204195 - MYO1D ENSG00000176658.12 31204195 0.74 1.0 15638 79722
chr17 31254928 31272124 + TMEM98 ENSG00000006042.7 31254928 0.83 0.99 15639 69823
chr17 31297394 31324895 + SPACA3 ENSG00000141316.8 31297394 1.0 0.93 15640 27357
Expression level of Genes
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miRNAs possibly regulated by vista24452[chr17:31224473-31224751]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results