EnhancerDB
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  3. vista24453[chr17:31254083-31254387]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24453[chr17:31254083-31254387]
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Tissue distribution of vista24453
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Transcription factor that possibly regulate vista24453[chr17:31254083-31254387]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 31254239 31254517 FOXA1 UCSC Txn Factor no Conserved 108250479
chr17 31254276 31254506 FOXA2 UCSC Txn Factor no Conserved 108250482
chr17 31254109 31254113 NFE TRANSFAC yes 21221076
chr17 31254119 31254134 MEF2C JASPAR yes 21221077
chr17 31254119 31254140 IRF1 JASPAR yes 21221078
chr17 31254120 31254132 POU3F1 JASPAR yes 21221079
chr17 31254120 31254132 POU3F2 JASPAR yes 21221080
chr17 31254120 31254133 POU3F3 JASPAR yes 21221081
chr17 31254121 31254133 POU2F1 JASPAR yes 21221082
chr17 31254129 31254141 FOXC2 JASPAR yes 21221083
chr17 31254131 31254146 LEF1 JASPAR yes 21221084
chr17 31254176 31254187 ESRRB JASPAR yes 21221085
chr17 31254177 31254191 PLAG1 JASPAR yes 21221086
chr17 31254179 31254191 TFAP2A JASPAR yes 21221087
chr17 31254227 31254231 H1TF2 TRANSFAC yes 21221088
chr17 31254227 31254231 NFE TRANSFAC yes 21221089
chr17 31254227 31254231 SRF TRANSFAC yes 21221090
chr17 31254235 31254240 GATA2 JASPAR yes 21221091
chr17 31254239 31254245 LEF1 TRANSFAC yes 21221092
chr17 31254239 31254245 SOX10 JASPAR yes 21221093
chr17 31254240 31254249 SRY JASPAR yes 21221094
chr17 31254240 31254252 MYBL1 JASPAR yes 21221095
chr17 31254242 31254254 PKNOX1 JASPAR yes 21221096
chr17 31254245 31254248 MYB TRANSFAC yes 21221097
chr17 31254248 31254252 NFE TRANSFAC yes 21221098
chr17 31254261 31254269 CREB1 JASPAR yes 21221099
chr17 31254261 31254275 NR2F1 JASPAR yes 21221100
chr17 31254261 31254275 RXRB JASPAR yes 21221101
chr17 31254261 31254275 RXRG JASPAR yes 21221102
chr17 31254261 31254276 NR2C2 JASPAR yes 21221103
chr17 31254275 31254295 ESR1 JASPAR yes 21221104
chr17 31254288 31254297 THAP1 JASPAR yes 21221105
chr17 31254328 31254340 BHLHE23 JASPAR yes 21221106
chr17 31254329 31254339 BHLHE22 JASPAR yes 21221107
chr17 31254329 31254339 OLIG1 JASPAR yes 21221108
chr17 31254329 31254339 OLIG2 JASPAR yes 21221109
chr17 31254329 31254339 OLIG3 JASPAR yes 21221110
chr17 31254337 31254358 ZNF263 JASPAR yes 21221111
chr17 31254341 31254356 HSF1 JASPAR yes 21221112
chr17 31254342 31254355 HSF1 JASPAR yes 21221113
chr17 31254342 31254355 HSF2 JASPAR yes 21221114
chr17 31254342 31254355 HSF4 JASPAR yes 21221115
chr17 31254369 31254381 ELF1 JASPAR yes 21221116
chr17 31254371 31254380 ELK4 JASPAR yes 21221117
chr17 31254371 31254381 ERG JASPAR yes 21221118
chr17 31254371 31254381 FEV JASPAR yes 21221119
chr17 31254371 31254381 FLI1 JASPAR yes 21221120
chr17 31254372 31254380 FEV JASPAR yes 21221121
chr17 31254373 31254379 ETS1 JASPAR yes 21221122
chr17 31254373 31254383 RELA JASPAR yes 21221123
chr17 31254373 31254384 NFKB1 JASPAR yes 21221124
SNP sites on vista24453[chr17:31254083-31254387]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 31254102 rs147303499 C G no 4833348
chr17 31254268 rs8068629 C T
CREB1 FOXA1 NR2C2 NR2F1 RXRB RXRG
4833349
Genes possibly regulated by vista24453[chr17:31254083-31254387]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30819540 31204195 - MYO1D ENSG00000176658.12 31204195 0.74 1.0 15638 50112
chr17 31254928 31272124 + TMEM98 ENSG00000006042.7 31254928 0.83 0.99 15639 99459
chr17 31297394 31324895 + SPACA3 ENSG00000141316.8 31297394 1.0 0.93 15640 56993
Expression level of Genes
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miRNAs possibly regulated by vista24453[chr17:31254083-31254387]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results