EnhancerDB
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  3. vista24478[chr17:32561287-32561685]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24478[chr17:32561287-32561685]
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Tissue distribution of vista24478
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Transcription factor that possibly regulate vista24478[chr17:32561287-32561685]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 32561284 32561288 YY1 TRANSFAC yes 21222358
chr17 32561284 32561288 YY1 TRANSFAC yes 53965313
chr17 32561284 32561299 STAT1 JASPAR yes 21222359
chr17 32561284 32561299 STAT1 JASPAR yes 53965314
chr17 32561286 32561297 STAT1 JASPAR yes 21222360
chr17 32561286 32561297 STAT3 JASPAR yes 21222361
chr17 32561286 32561297 STAT1 JASPAR yes 53965315
chr17 32561286 32561297 STAT3 JASPAR yes 53965316
chr17 32561292 32561312 TP53 JASPAR yes 21222362
chr17 32561292 32561312 TP53 JASPAR yes 53965317
chr17 32561297 32561308 ESRRA JASPAR yes 21222363
chr17 32561297 32561308 ESRRA JASPAR yes 53965318
chr17 32561314 32561320 LEF1 TRANSFAC yes 21222364
chr17 32561314 32561320 SOX10 JASPAR yes 21222365
chr17 32561314 32561320 LEF1 TRANSFAC yes 53965319
chr17 32561314 32561320 SOX10 JASPAR yes 53965320
chr17 32561314 32561328 GLIS2 JASPAR yes 21222366
chr17 32561314 32561328 GLIS3 JASPAR yes 21222367
chr17 32561314 32561328 GLIS2 JASPAR yes 53965321
chr17 32561314 32561328 GLIS3 JASPAR yes 53965322
chr17 32561316 32561328 INSM1 JASPAR yes 21222368
chr17 32561316 32561328 INSM1 JASPAR yes 53965323
chr17 32561343 32561348 GATA2 JASPAR yes 21222369
chr17 32561343 32561348 GATA2 JASPAR yes 53965324
chr17 32561346 32561350 TEAD2 TRANSFAC yes 21222370
chr17 32561346 32561350 TEAD2 TRANSFAC yes 53965325
chr17 32561346 32561351 TBP TRANSFAC yes 21222371
chr17 32561346 32561351 TBP TRANSFAC yes 53965326
chr17 32561355 32561363 FOXO3 JASPAR yes 21222372
chr17 32561355 32561363 FOXO3 JASPAR yes 53965327
chr17 32561364 32561377 SMAD2 JASPAR yes 21222373
chr17 32561364 32561377 SMAD2 JASPAR yes 53965328
chr17 32561375 32561388 POU3F3 JASPAR yes 21222374
chr17 32561375 32561388 POU3F3 JASPAR yes 53965329
chr17 32561376 32561388 POU2F1 JASPAR yes 21222375
chr17 32561376 32561388 POU2F1 JASPAR yes 53965330
chr17 32561377 32561386 POU3F4 JASPAR yes 21222376
chr17 32561377 32561386 POU5F1B JASPAR yes 21222377
chr17 32561377 32561386 POU3F4 JASPAR yes 53965331
chr17 32561377 32561386 POU5F1B JASPAR yes 53965332
chr17 32561380 32561391 NFE2L2 JASPAR yes 21222378
chr17 32561380 32561391 NFE2L2 JASPAR yes 53965333
chr17 32561388 32561392 YY1 TRANSFAC yes 21222379
chr17 32561388 32561392 YY1 TRANSFAC yes 53965334
chr17 32561393 32561413 RREB1 JASPAR yes 21222380
chr17 32561393 32561413 RREB1 JASPAR yes 53965335
chr17 32561446 32561461 HNF1A JASPAR yes 21222381
chr17 32561446 32561461 HNF1A JASPAR yes 53965336
chr17 32561447 32561456 SRY JASPAR yes 21222382
chr17 32561447 32561456 SRY JASPAR yes 53965337
chr17 32561449 32561452 MYB TRANSFAC yes 21222383
chr17 32561449 32561452 MYB TRANSFAC yes 53965338
chr17 32561450 32561459 VENTX JASPAR yes 21222384
chr17 32561450 32561459 VENTX JASPAR yes 53965339
chr17 32561450 32561460 ESX1 JASPAR yes 21222385
chr17 32561450 32561460 GBX2 JASPAR yes 21222386
chr17 32561450 32561460 RAX JASPAR yes 21222387
chr17 32561450 32561460 ESX1 JASPAR yes 53965340
chr17 32561450 32561460 GBX2 JASPAR yes 53965341
chr17 32561450 32561460 RAX JASPAR yes 53965342
chr17 32561451 32561459 BARX1 JASPAR yes 21222388
chr17 32561451 32561459 BARX1 JASPAR yes 53965343
chr17 32561452 32561464 POU3F1 JASPAR yes 21222389
chr17 32561452 32561464 POU3F2 JASPAR yes 21222390
chr17 32561452 32561464 POU3F1 JASPAR yes 53965344
chr17 32561452 32561464 POU3F2 JASPAR yes 53965345
chr17 32561456 32561459 MYB TRANSFAC yes 21222391
chr17 32561456 32561459 MYB TRANSFAC yes 53965346
chr17 32561459 32561463 YY1 TRANSFAC yes 21222392
chr17 32561459 32561463 YY1 TRANSFAC yes 53965347
chr17 32561463 32561474 FOXH1 JASPAR yes 21222393
chr17 32561463 32561474 FOXH1 JASPAR yes 53965348
chr17 32561464 32561470 ZNF354C JASPAR yes 21222394
chr17 32561464 32561470 ZNF354C JASPAR yes 53965349
chr17 32561468 32561483 TFAP2A JASPAR yes 21222395
chr17 32561468 32561483 TFAP2A JASPAR yes 53965350
chr17 32561470 32561485 TFAP2A JASPAR yes 21222396
chr17 32561470 32561485 TFAP2C JASPAR yes 21222397
chr17 32561470 32561485 TFAP2A JASPAR yes 53965351
chr17 32561470 32561485 TFAP2C JASPAR yes 53965352
chr17 32561471 32561482 EBF1 JASPAR yes 21222398
chr17 32561471 32561482 EBF1 JASPAR yes 53965353
chr17 32561477 32561482 SP1 TRANSFAC yes 21222399
chr17 32561477 32561482 SP1 TRANSFAC yes 53965354
chr17 32561492 32561507 SCRT1 JASPAR yes 21222400
chr17 32561492 32561507 SCRT1 JASPAR yes 53965355
chr17 32561495 32561498 MYB TRANSFAC yes 21222401
chr17 32561495 32561498 MYB TRANSFAC yes 53965356
chr17 32561499 32561511 FOXI1 JASPAR yes 21222402
chr17 32561499 32561511 FOXI1 JASPAR yes 53965357
chr17 32561500 32561512 FOXC2 JASPAR yes 21222403
chr17 32561500 32561512 FOXC2 JASPAR yes 53965358
chr17 32561501 32561512 FOXB1 JASPAR yes 21222404
chr17 32561501 32561512 FOXC1 JASPAR yes 21222405
chr17 32561501 32561512 FOXB1 JASPAR yes 53965359
chr17 32561501 32561512 FOXC1 JASPAR yes 53965360
chr17 32561502 32561506 YY1 TRANSFAC yes 21222406
chr17 32561502 32561506 YY1 TRANSFAC yes 53965361
chr17 32561506 32561510 YY1 TRANSFAC yes 21222407
chr17 32561506 32561510 YY1 TRANSFAC yes 53965362
chr17 32561510 32561513 MYB TRANSFAC yes 21222408
chr17 32561510 32561513 MYB TRANSFAC yes 53965363
chr17 32561538 32561552 GATA2 JASPAR yes 21222409
chr17 32561538 32561552 GATA2 JASPAR yes 53965364
chr17 32561540 32561546 GATA3 JASPAR yes 21222410
chr17 32561540 32561546 GATA3 JASPAR yes 53965365
chr17 32561562 32561566 YY1 TRANSFAC yes 21222411
chr17 32561562 32561566 YY1 TRANSFAC yes 53965366
chr17 32561582 32561589 SPIB JASPAR yes 21222412
chr17 32561582 32561589 SPIB JASPAR yes 53965367
chr17 32561596 32561604 FOXC1 JASPAR yes 21222413
chr17 32561596 32561604 FOXC1 JASPAR yes 53965368
chr17 32561598 32561605 NKX3-1 JASPAR yes 21222414
chr17 32561598 32561605 NKX3-1 JASPAR yes 53965369
chr17 32561618 32561622 TEAD2 TRANSFAC yes 21222415
chr17 32561618 32561622 TEAD2 TRANSFAC yes 53965370
chr17 32561647 32561664 BCL6B JASPAR yes 21222416
chr17 32561647 32561664 BCL6B JASPAR yes 53965371
chr17 32561665 32561680 HSF1 JASPAR yes 21222417
chr17 32561665 32561680 HSF1 JASPAR yes 53965372
chr17 32561680 32561698 RARA JASPAR yes 21222418
chr17 32561680 32561698 RARA JASPAR yes 53965373
chr17 32561681 32561686 MYB TRANSFAC yes 21222419
chr17 32561681 32561686 MYB TRANSFAC yes 53965374
SNP sites on vista24478[chr17:32561287-32561685]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 32561424 rs112728457 T C no 4839562
chr17 32561427 rs28362157 C G no 4839563
chr17 32561629 rs141600507 T A no 4839564
Genes possibly regulated by vista24478[chr17:32561287-32561685]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 31340105 32501983 - ASIC2 ENSG00000108684.10 32501983 0.96 0.99 15641 40696
chr17 32581900 32582306 - AC005549.3 ENSG00000268024.1 32582306 1.0 0.0 15642 79379
chr17 32582304 32584222 + CCL2 ENSG00000108691.5 32582304 0.83 0.97 15643 79381
chr17 32597240 32599261 + CCL7 ENSG00000108688.7 32597240 0.99 0.99 15644 64445
chr17 32612687 32615353 + CCL11 ENSG00000172156.3 32612687 0.96 1.0 15645 48998
chr17 32646055 32648421 + CCL8 ENSG00000108700.4 32646055 0.83 0.0 15646 15630
Expression level of Genes
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miRNAs possibly regulated by vista24478[chr17:32561287-32561685]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results