EnhancerDB
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  3. vista24556[chr17:34396377-34396719]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24556[chr17:34396377-34396719]
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Tissue distribution of vista24556
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Transcription factor that possibly regulate vista24556[chr17:34396377-34396719]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 34396377 34396392 FOXP1 JASPAR yes 21226456
chr17 34396378 34396384 TBP TRANSFAC yes 21226457
chr17 34396378 34396393 FOXP1 JASPAR yes 21226458
chr17 34396440 34396454 TLX1 JASPAR yes 21226459
chr17 34396454 34396465 E2F6 JASPAR yes 21226460
chr17 34396457 34396465 TBX15 JASPAR yes 21226461
chr17 34396458 34396472 PLAG1 JASPAR yes 21226462
chr17 34396463 34396470 E2F1 TRANSFAC yes 21226463
chr17 34396490 34396510 TP63 JASPAR yes 21226464
chr17 34396493 34396504 NFE2 JASPAR yes 21226465
chr17 34396494 34396505 FOSL2 JASPAR yes 21226466
chr17 34396509 34396523 TCF7L2 JASPAR yes 21226467
chr17 34396542 34396554 TAL1 JASPAR yes 21226468
chr17 34396543 34396555 NHLH1 JASPAR yes 21226469
chr17 34396543 34396556 ZBTB18 JASPAR yes 21226470
chr17 34396544 34396554 MSC JASPAR yes 21226471
chr17 34396544 34396554 TFAP4 JASPAR yes 21226472
chr17 34396550 34396555 TFAP2A TRANSFAC yes 21226473
chr17 34396550 34396556 MZF1 JASPAR yes 21226474
chr17 34396558 34396562 NFE TRANSFAC yes 21226475
chr17 34396590 34396598 GATA3 JASPAR yes 21226476
chr17 34396592 34396612 TP53 JASPAR yes 21226477
chr17 34396603 34396614 ESRRA JASPAR yes 21226478
chr17 34396628 34396631 MYB TRANSFAC yes 21226479
chr17 34396633 34396651 ESR2 JASPAR yes 21226480
chr17 34396634 34396651 ESR1 JASPAR yes 21226481
chr17 34396646 34396657 GCM1 JASPAR yes 21226482
chr17 34396680 34396684 YY1 TRANSFAC yes 21226483
chr17 34396684 34396690 MZF1 JASPAR yes 21226484
chr17 34396694 34396702 RHOXF1 JASPAR yes 21226485
SNP sites on vista24556[chr17:34396377-34396719]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 34396379 rs144277762 TA T
FOXP1 TBP
4846798
chr17 34396379 rs535958220 T TA
FOXP1 TBP
4846799
chr17 34396379 rs796516839 T TA
FOXP1 TBP
4846800
chr17 34396393 rs185841311 T A
FOXP1
4846801
chr17 34396500 rs534369000 C T
FOSL2 NFE2 TP63
4846802
chr17 34396590 rs116128629 G C
GATA3
4846803
chr17 34396612 rs534802429 T C
ESRRA TP53
4846804
chr17 34396667 rs712043 C T no 4846805
Genes possibly regulated by vista24556[chr17:34396377-34396719]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 34303529 34308532 - CCL16 ENSG00000161573.6 34308532 0.99 0.99 15678 12155
chr17 34310327 34329100 - CCL14 ENSG00000213494.5 34329100 0.89 1.0 15679 32723
chr17 34310692 34317306 + CTB-186H2.3 ENSG00000266956.1 34310692 0.97 0.0 15681 14315
chr17 34310692 34328660 - CCL15-CCL14 ENSG00000161574.11 34328660 0.98 1.0 15680 32283
chr17 34323476 34329084 - CCL15 ENSG00000267596.1 34329084 0.96 1.0 15682 32707
chr17 34340096 34345005 - CCL23 ENSG00000167236.2 34345005 0.87 0.0 15683 48628
chr17 34391640 34399392 + CCL18 ENSG00000006074.4 34391640 0.98 0.0 15684 95263
chr17 34415602 34417515 - CCL3 ENSG00000006075.11 34417515 0.93 1.0 15685 79204
chr17 34430983 34433014 + CCL4 ENSG00000129277.9 34430983 0.93 0.99 15686 65736
Expression level of Genes
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miRNAs possibly regulated by vista24556[chr17:34396377-34396719]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results