EnhancerDB
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  3. vista24557[chr17:34400015-34400366]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24557[chr17:34400015-34400366]
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Tissue distribution of vista24557
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Transcription factor that possibly regulate vista24557[chr17:34400015-34400366]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 34399796 34400253 ZNF263 UCSC Txn Factor no Conserved 108251411
chr17 34399870 34400536 CTCF UCSC Txn Factor no Conserved 108251421
chr17 34399883 34400152 RUNX3 UCSC Txn Factor no Conserved 108251423
chr17 34399924 34400199 RAD21 UCSC Txn Factor no Conserved 108251430
chr17 34400007 34400022 RUNX2 JASPAR yes 21226486
chr17 34400007 34400022 RUNX2 JASPAR yes 54026617
chr17 34400016 34400020 ESR1 TRANSFAC yes 21226487
chr17 34400016 34400020 ESR1 TRANSFAC yes 54026618
chr17 34400022 34400032 GABPA JASPAR yes 21226488
chr17 34400022 34400032 GABPA JASPAR yes 54026619
chr17 34400024 34400030 ETS1 JASPAR yes 21226489
chr17 34400024 34400030 SPI1 JASPAR yes 21226490
chr17 34400024 34400030 ETS1 JASPAR yes 54026620
chr17 34400024 34400030 SPI1 JASPAR yes 54026621
chr17 34400029 34400041 ZBTB7A JASPAR yes 21226491
chr17 34400029 34400041 ZBTB7A JASPAR yes 54026622
chr17 34400030 34400035 SP1 TRANSFAC yes 21226492
chr17 34400030 34400035 SP1 TRANSFAC yes 54026623
chr17 34400046 34400055 SOX9 JASPAR yes 21226493
chr17 34400046 34400055 SOX9 JASPAR yes 54026624
chr17 34400063 34400082 CTCF JASPAR yes 21226494
chr17 34400063 34400082 CTCF JASPAR yes 54026625
chr17 34400066 34400080 ZIC1 JASPAR yes 21226495
chr17 34400066 34400080 ZIC1 JASPAR yes 54026626
chr17 34400066 34400081 ZIC3 JASPAR yes 21226496
chr17 34400066 34400081 ZIC4 JASPAR yes 21226497
chr17 34400066 34400081 ZIC3 JASPAR yes 54026627
chr17 34400066 34400081 ZIC4 JASPAR yes 54026628
chr17 34400078 34400091 SCRT2 JASPAR yes 21226498
chr17 34400078 34400091 SCRT2 JASPAR yes 54026629
chr17 34400078 34400093 SCRT1 JASPAR yes 21226499
chr17 34400078 34400093 SCRT1 JASPAR yes 54026630
chr17 34400084 34400099 NR2C2 JASPAR yes 21226500
chr17 34400084 34400099 NR2C2 JASPAR yes 54026631
chr17 34400085 34400099 RXRB JASPAR yes 21226501
chr17 34400085 34400099 RXRG JASPAR yes 21226502
chr17 34400085 34400099 RXRB JASPAR yes 54026632
chr17 34400085 34400099 RXRG JASPAR yes 54026633
chr17 34400085 34400100 HNF4A JASPAR yes 21226503
chr17 34400085 34400100 HNF4A JASPAR yes 54026634
chr17 34400090 34400101 ESRRA JASPAR yes 21226504
chr17 34400090 34400101 ESRRB JASPAR yes 21226505
chr17 34400090 34400101 ESRRA JASPAR yes 54026635
chr17 34400090 34400101 ESRRB JASPAR yes 54026636
chr17 34400092 34400100 NR4A2 JASPAR yes 21226506
chr17 34400092 34400100 NR4A2 JASPAR yes 54026637
chr17 34400094 34400098 ESR1 TRANSFAC yes 21226507
chr17 34400094 34400098 ESR1 TRANSFAC yes 54026638
chr17 34400142 34400148 SOX10 JASPAR yes 21226508
chr17 34400142 34400148 SOX10 JASPAR yes 54026639
chr17 34400148 34400161 ZBTB18 JASPAR yes 21226509
chr17 34400148 34400161 ZBTB18 JASPAR yes 54026640
chr17 34400149 34400161 NHLH1 JASPAR yes 21226510
chr17 34400149 34400161 NHLH1 JASPAR yes 54026641
chr17 34400150 34400160 FIGLA JASPAR yes 21226511
chr17 34400150 34400160 MSC JASPAR yes 21226512
chr17 34400150 34400160 MYF6 JASPAR yes 21226513
chr17 34400150 34400160 NHLH1 JASPAR yes 21226514
chr17 34400150 34400160 TFAP4 JASPAR yes 21226515
chr17 34400150 34400160 FIGLA JASPAR yes 54026642
chr17 34400150 34400160 MSC JASPAR yes 54026643
chr17 34400150 34400160 MYF6 JASPAR yes 54026644
chr17 34400150 34400160 NHLH1 JASPAR yes 54026645
chr17 34400150 34400160 TFAP4 JASPAR yes 54026646
chr17 34400150 34400162 TAL1 JASPAR yes 21226516
chr17 34400150 34400162 TAL1 JASPAR yes 54026647
chr17 34400151 34400172 REST JASPAR yes 21226517
chr17 34400151 34400172 REST JASPAR yes 54026648
chr17 34400167 34400179 MYBL1 JASPAR yes 21226518
chr17 34400167 34400179 MYBL1 JASPAR yes 54026649
chr17 34400203 34400208 GATA2 JASPAR yes 21226519
chr17 34400203 34400208 GATA2 JASPAR yes 54026650
chr17 34400216 34400230 GATA2 JASPAR yes 21226520
chr17 34400216 34400230 GATA2 JASPAR yes 54026651
chr17 34400220 34400228 FOXG1 JASPAR yes 21226521
chr17 34400220 34400228 FOXG1 JASPAR yes 54026652
chr17 34400228 34400232 YY1 TRANSFAC yes 21226522
chr17 34400228 34400232 YY1 TRANSFAC yes 54026653
chr17 34400234 34400254 RREB1 JASPAR yes 21226523
chr17 34400234 34400254 RREB1 JASPAR yes 54026654
chr17 34400240 34400255 RUNX2 JASPAR yes 21226524
chr17 34400240 34400255 RUNX2 JASPAR yes 54026655
chr17 34400260 34400270 GSC JASPAR yes 21226525
chr17 34400260 34400270 GSC JASPAR yes 54026656
chr17 34400262 34400274 POU3F1 JASPAR yes 21226526
chr17 34400262 34400274 POU3F2 JASPAR yes 21226527
chr17 34400262 34400274 POU3F1 JASPAR yes 54026657
chr17 34400262 34400274 POU3F2 JASPAR yes 54026658
chr17 34400264 34400273 POU5F1B JASPAR yes 21226528
chr17 34400264 34400273 POU5F1B JASPAR yes 54026659
chr17 34400290 34400299 THAP1 JASPAR yes 21226529
chr17 34400290 34400299 THAP1 JASPAR yes 54026660
chr17 34400299 34400303 H1TF2 TRANSFAC yes 21226530
chr17 34400299 34400303 NFE TRANSFAC yes 21226531
chr17 34400299 34400303 SRF TRANSFAC yes 21226532
chr17 34400299 34400303 H1TF2 TRANSFAC yes 54026661
chr17 34400299 34400303 NFE TRANSFAC yes 54026662
chr17 34400299 34400303 SRF TRANSFAC yes 54026663
chr17 34400319 34400323 H1TF2 TRANSFAC yes 21226533
chr17 34400319 34400323 NFE TRANSFAC yes 21226534
chr17 34400319 34400323 SRF TRANSFAC yes 21226535
chr17 34400319 34400323 H1TF2 TRANSFAC yes 54026664
chr17 34400319 34400323 NFE TRANSFAC yes 54026665
chr17 34400319 34400323 SRF TRANSFAC yes 54026666
chr17 34400331 34400335 H4TF2 TRANSFAC yes 21226536
chr17 34400331 34400335 H4TF2 TRANSFAC yes 54026667
chr17 34400355 34400363 EHF JASPAR yes 21226537
chr17 34400355 34400363 EHF JASPAR yes 54026668
chr17 34400355 34400375 ESR1 JASPAR yes 21226538
chr17 34400355 34400375 ESR1 JASPAR yes 54026669
SNP sites on vista24557[chr17:34400015-34400366]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 34400098 rs114303587 C T
CTCF ESR1 ESRRA ESRRB HNF4A NR2C2 NR4A2 RAD21 RUNX3 RXRB RXRG ZNF263
4846811
chr17 34400112 rs187505704 C T
CTCF RAD21 RUNX3 ZNF263
4846812
Genes possibly regulated by vista24557[chr17:34400015-34400366]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 34303529 34308532 - CCL16 ENSG00000161573.6 34308532 0.99 0.99 15678 8517
chr17 34310327 34329100 - CCL14 ENSG00000213494.5 34329100 0.89 1.0 15679 29085
chr17 34310692 34317306 + CTB-186H2.3 ENSG00000266956.1 34310692 0.97 0.0 15681 10677
chr17 34310692 34328660 - CCL15-CCL14 ENSG00000161574.11 34328660 0.98 1.0 15680 28645
chr17 34323476 34329084 - CCL15 ENSG00000267596.1 34329084 0.96 1.0 15682 29069
chr17 34340096 34345005 - CCL23 ENSG00000167236.2 34345005 0.87 0.0 15683 44990
chr17 34391640 34399392 + CCL18 ENSG00000006074.4 34391640 0.98 0.0 15684 91625
chr17 34415602 34417515 - CCL3 ENSG00000006075.11 34417515 0.93 1.0 15685 82851
chr17 34430983 34433014 + CCL4 ENSG00000129277.9 34430983 0.93 0.99 15686 69383
Expression level of Genes
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miRNAs possibly regulated by vista24557[chr17:34400015-34400366]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results