EnhancerDB
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  3. vista24565[chr17:34459822-34460202]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24565[chr17:34459822-34460202]
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Tissue distribution of vista24565
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Transcription factor that possibly regulate vista24565[chr17:34459822-34460202]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 34459777 34460241 RELA UCSC Txn Factor no Conserved 108251545
chr17 34459815 34459829 ONECUT3 JASPAR yes 21226846
chr17 34459815 34459829 ONECUT3 JASPAR yes 54031883
chr17 34459821 34459825 H1TF2 TRANSFAC yes 21226847
chr17 34459821 34459825 NFE TRANSFAC yes 21226848
chr17 34459821 34459825 SRF TRANSFAC yes 21226849
chr17 34459821 34459825 H1TF2 TRANSFAC yes 54031884
chr17 34459821 34459825 NFE TRANSFAC yes 54031885
chr17 34459821 34459825 SRF TRANSFAC yes 54031886
chr17 34459837 34459848 BATF JASPAR yes 21226850
chr17 34459837 34459848 BATF JASPAR yes 54031887
chr17 34459839 34459854 IRF9 JASPAR yes 21226851
chr17 34459839 34459854 IRF9 JASPAR yes 54031888
chr17 34459840 34459854 IRF7 JASPAR yes 21226852
chr17 34459840 34459854 IRF7 JASPAR yes 54031889
chr17 34459850 34459858 HOXA5 JASPAR yes 21226853
chr17 34459850 34459858 HOXA5 JASPAR yes 54031890
chr17 34459863 34459870 JUN TRANSFAC yes 21226854
chr17 34459863 34459870 JUN TRANSFAC yes 54031891
chr17 34459875 34459886 HOXC13 JASPAR yes 21226855
chr17 34459875 34459886 HOXC13 JASPAR yes 54031892
chr17 34459884 34459888 H1TF2 TRANSFAC yes 21226856
chr17 34459884 34459888 NFE TRANSFAC yes 21226857
chr17 34459884 34459888 SRF TRANSFAC yes 21226858
chr17 34459884 34459888 H1TF2 TRANSFAC yes 54031893
chr17 34459884 34459888 NFE TRANSFAC yes 54031894
chr17 34459884 34459888 SRF TRANSFAC yes 54031895
chr17 34459884 34459890 NFYC TRANSFAC yes 21226859
chr17 34459884 34459890 NFYC TRANSFAC yes 54031896
chr17 34459893 34459899 LEF1 TRANSFAC yes 21226860
chr17 34459893 34459899 TCF4 TRANSFAC yes 21226861
chr17 34459893 34459899 LEF1 TRANSFAC yes 54031897
chr17 34459893 34459899 TCF4 TRANSFAC yes 54031898
chr17 34459894 34459905 DMRT3 JASPAR yes 21226862
chr17 34459894 34459905 DMRT3 JASPAR yes 54031899
chr17 34459920 34459932 TEAD1 JASPAR yes 21226863
chr17 34459920 34459932 TEAD1 JASPAR yes 54031900
chr17 34459923 34459931 TEAD3 JASPAR yes 21226864
chr17 34459923 34459931 TEAD3 JASPAR yes 54031901
chr17 34459937 34459947 ELK1 JASPAR yes 21226865
chr17 34459937 34459947 ELK1 JASPAR yes 54031902
chr17 34459938 34459949 ETV2 JASPAR yes 21226866
chr17 34459938 34459949 ETV2 JASPAR yes 54031903
chr17 34459939 34459948 ELK4 JASPAR yes 21226867
chr17 34459939 34459948 ELK4 JASPAR yes 54031904
chr17 34459941 34459947 ETS1 JASPAR yes 21226868
chr17 34459941 34459947 ETS1 JASPAR yes 54031905
chr17 34459962 34459977 PRDM1 JASPAR yes 21226869
chr17 34459962 34459977 PRDM1 JASPAR yes 54031906
chr17 34459972 34459986 EBF1 JASPAR yes 21226870
chr17 34459972 34459986 EBF1 JASPAR yes 54031907
chr17 34459992 34460006 SPI1 JASPAR yes 21226871
chr17 34459992 34460006 SPI1 JASPAR yes 54031908
chr17 34460008 34460019 NFKB1 JASPAR yes 21226872
chr17 34460008 34460019 NFKB1 JASPAR yes 54031909
chr17 34460015 34460029 SPIC JASPAR yes 21226873
chr17 34460015 34460029 SPIC JASPAR yes 54031910
chr17 34460061 34460070 HIC2 JASPAR yes 21226874
chr17 34460061 34460070 HIC2 JASPAR yes 54031911
chr17 34460068 34460085 PAX1 JASPAR yes 21226875
chr17 34460068 34460085 PAX1 JASPAR yes 54031912
chr17 34460070 34460084 PAX6 JASPAR yes 21226876
chr17 34460070 34460084 PAX6 JASPAR yes 54031913
chr17 34460072 34460084 HNF1B JASPAR yes 21226877
chr17 34460072 34460084 HNF1B JASPAR yes 54031914
chr17 34460074 34460087 EOMES JASPAR yes 21226878
chr17 34460074 34460087 EOMES JASPAR yes 54031915
chr17 34460075 34460085 TBR1 JASPAR yes 21226879
chr17 34460075 34460085 TBR1 JASPAR yes 54031916
chr17 34460077 34460095 RARA JASPAR yes 21226880
chr17 34460077 34460095 RARA JASPAR yes 54031917
chr17 34460083 34460087 YY1 TRANSFAC yes 21226881
chr17 34460083 34460087 YY1 TRANSFAC yes 54031918
chr17 34460091 34460102 USF2 JASPAR yes 21226882
chr17 34460091 34460102 USF2 JASPAR yes 54031919
chr17 34460102 34460116 GATA2 JASPAR yes 21226883
chr17 34460102 34460116 GATA2 JASPAR yes 54031920
chr17 34460106 34460114 GATA5 JASPAR yes 21226884
chr17 34460106 34460114 GATA5 JASPAR yes 54031921
chr17 34460115 34460121 ZNF354C JASPAR yes 21226885
chr17 34460115 34460121 ZNF354C JASPAR yes 54031922
chr17 34460116 34460125 NKX3-2 JASPAR yes 21226886
chr17 34460116 34460125 NKX3-2 JASPAR yes 54031923
chr17 34460124 34460130 YY1 JASPAR yes 21226887
chr17 34460124 34460130 YY1 JASPAR yes 54031924
chr17 34460135 34460139 LFA1 TRANSFAC yes 21226888
chr17 34460135 34460139 LFA1 TRANSFAC yes 54031925
chr17 34460160 34460170 NFATC3 JASPAR yes 21226889
chr17 34460160 34460170 NFATC3 JASPAR yes 54031926
chr17 34460162 34460169 NFATC2 JASPAR yes 21226890
chr17 34460162 34460169 NFATC2 JASPAR yes 54031927
chr17 34460173 34460183 TBX21 JASPAR yes 21226891
chr17 34460173 34460183 TBX21 JASPAR yes 54031928
chr17 34460174 34460182 MGA JASPAR yes 21226892
chr17 34460174 34460182 TBX15 JASPAR yes 21226893
chr17 34460174 34460182 TBX1 JASPAR yes 21226894
chr17 34460174 34460182 TBX4 JASPAR yes 21226895
chr17 34460174 34460182 TBX5 JASPAR yes 21226896
chr17 34460174 34460182 MGA JASPAR yes 54031929
chr17 34460174 34460182 TBX15 JASPAR yes 54031930
chr17 34460174 34460182 TBX1 JASPAR yes 54031931
chr17 34460174 34460182 TBX4 JASPAR yes 54031932
chr17 34460174 34460182 TBX5 JASPAR yes 54031933
chr17 34460195 34460207 TFAP2B JASPAR yes 21226897
chr17 34460195 34460207 TFAP2B JASPAR yes 54031934
chr17 34460196 34460207 TFAP2B JASPAR yes 21226898
chr17 34460196 34460207 TFAP2B JASPAR yes 54031935
SNP sites on vista24565[chr17:34459822-34460202]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 34459833 rs28377240 C A
RELA
4847844
chr17 34459848 rs573937354 TG T
BATF IRF7 IRF9 RELA
4847845
chr17 34459881 rs142802530 T C
HOXC13 RELA
4847846
chr17 34459937 rs543114385 A G
ELK1 RELA
4847847
chr17 34460018 rs35420579 C T
NFKB1 RELA SPIC
4847848
chr17 34460049 rs7212797 T C
RELA
4847849
Genes possibly regulated by vista24565[chr17:34459822-34460202]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 34391640 34399392 + CCL18 ENSG00000006074.4 34391640 0.98 0.0 15684 31818
chr17 34415602 34417515 - CCL3 ENSG00000006075.11 34417515 0.93 1.0 15685 57693
chr17 34430983 34433014 + CCL4 ENSG00000129277.9 34430983 0.93 0.99 15686 71161
chr17 34493061 34503996 - TBC1D3B ENSG00000224226.4 34503996 0.98 0.93 15687 56206
chr17 34522268 34524157 - CCL3L3 ENSG00000256515.3 34524157 0.97 1.0 15688 36045
chr17 34538310 34540280 + CCL4L1 ENSG00000205020.7 34538310 0.95 1.0 15689 21892
Expression level of Genes
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miRNAs possibly regulated by vista24565[chr17:34459822-34460202]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results