EnhancerDB
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  3. vista24680[chr17:38226807-38227182]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24680[chr17:38226807-38227182]
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Tissue distribution of vista24680
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Transcription factor that possibly regulate vista24680[chr17:38226807-38227182]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38226527 38226809 NR3C1 UCSC Txn Factor no Conserved 107687966
chr17 38226527 38226809 NR3C1 UCSC Txn Factor no Conserved 108253912
chr17 38226801 38226810 THAP1 JASPAR yes 12372
chr17 38226801 38226810 THAP1 JASPAR yes 21232257
chr17 38226801 38226810 THAP1 JASPAR yes 54191175
chr17 38226811 38226822 NRF1 JASPAR yes 12373
chr17 38226811 38226822 NRF1 JASPAR yes 21232258
chr17 38226811 38226822 NRF1 JASPAR yes 54191176
chr17 38226814 38226829 RFX5 JASPAR yes 12374
chr17 38226814 38226829 RFX5 JASPAR yes 21232259
chr17 38226814 38226829 RFX5 JASPAR yes 54191177
chr17 38226816 38226833 PAX9 JASPAR yes 12375
chr17 38226816 38226833 PAX9 JASPAR yes 21232260
chr17 38226816 38226833 PAX9 JASPAR yes 54191178
chr17 38226832 38226836 YY1 TRANSFAC yes 12376
chr17 38226832 38226836 YY1 TRANSFAC yes 21232261
chr17 38226832 38226836 YY1 TRANSFAC yes 54191179
chr17 38226857 38226862 SP1 TRANSFAC yes 12377
chr17 38226857 38226862 SP1 TRANSFAC yes 21232262
chr17 38226857 38226862 SP1 TRANSFAC yes 54191180
chr17 38226857 38226863 SP1 TRANSFAC yes 12378
chr17 38226857 38226863 SP1 TRANSFAC yes 21232263
chr17 38226857 38226863 SP1 TRANSFAC yes 54191181
chr17 38226860 38226870 SP1 JASPAR yes 12379
chr17 38226860 38226870 SP1 JASPAR yes 21232264
chr17 38226860 38226870 SP1 JASPAR yes 54191182
chr17 38226879 38226892 ELF1 JASPAR yes 12380
chr17 38226879 38226892 ELF1 JASPAR yes 21232265
chr17 38226879 38226892 ELF1 JASPAR yes 54191183
chr17 38226880 38226888 EHF JASPAR yes 12381
chr17 38226880 38226888 EHF JASPAR yes 21232266
chr17 38226880 38226888 EHF JASPAR yes 54191184
chr17 38226896 38226901 SP1 TRANSFAC yes 12382
chr17 38226896 38226901 SP1 TRANSFAC yes 21232267
chr17 38226896 38226901 SP1 TRANSFAC yes 54191185
chr17 38226900 38226910 SP1 JASPAR yes 12383
chr17 38226900 38226910 SP1 JASPAR yes 21232268
chr17 38226900 38226910 SP1 JASPAR yes 54191186
chr17 38226901 38226911 SP1 JASPAR yes 12384
chr17 38226901 38226911 SP1 JASPAR yes 21232269
chr17 38226901 38226911 SP1 JASPAR yes 54191187
chr17 38226910 38226931 ZNF263 JASPAR yes 12385
chr17 38226910 38226931 ZNF263 JASPAR yes 21232270
chr17 38226910 38226931 ZNF263 JASPAR yes 54191188
chr17 38226914 38226934 RREB1 JASPAR yes 12386
chr17 38226914 38226934 RREB1 JASPAR yes 21232271
chr17 38226914 38226934 RREB1 JASPAR yes 54191189
chr17 38226917 38226937 RREB1 JASPAR yes 12387
chr17 38226917 38226937 RREB1 JASPAR yes 21232272
chr17 38226917 38226937 RREB1 JASPAR yes 54191190
chr17 38226925 38226930 SP1 TRANSFAC yes 12388
chr17 38226925 38226930 SP1 TRANSFAC yes 21232273
chr17 38226925 38226930 SP1 TRANSFAC yes 54191191
chr17 38226926 38226936 ZNF740 JASPAR yes 12389
chr17 38226926 38226936 ZNF740 JASPAR yes 21232274
chr17 38226926 38226936 ZNF740 JASPAR yes 54191192
chr17 38226928 38226938 SP1 JASPAR yes 12390
chr17 38226928 38226938 SP1 JASPAR yes 21232275
chr17 38226928 38226938 SP1 JASPAR yes 54191193
chr17 38226930 38226936 MAZ TRANSFAC yes 12391
chr17 38226930 38226936 MAZ TRANSFAC yes 21232276
chr17 38226930 38226936 MAZ TRANSFAC yes 54191194
chr17 38226933 38226944 NFKB1 JASPAR yes 12392
chr17 38226933 38226944 NFKB1 JASPAR yes 21232277
chr17 38226933 38226944 NFKB1 JASPAR yes 54191195
chr17 38226934 38226944 RELA JASPAR yes 12393
chr17 38226934 38226944 RELA JASPAR yes 21232278
chr17 38226934 38226944 RELA JASPAR yes 54191196
chr17 38226939 38226949 ZNF740 JASPAR yes 12394
chr17 38226939 38226949 ZNF740 JASPAR yes 21232279
chr17 38226939 38226949 ZNF740 JASPAR yes 54191197
chr17 38226950 38226969 REST JASPAR yes 12395
chr17 38226950 38226969 REST JASPAR yes 21232280
chr17 38226950 38226969 REST JASPAR yes 54191198
chr17 38226957 38226978 ZNF263 JASPAR yes 12396
chr17 38226957 38226978 ZNF263 JASPAR yes 21232281
chr17 38226957 38226978 ZNF263 JASPAR yes 54191199
chr17 38226962 38226983 ZNF263 JASPAR yes 12397
chr17 38226962 38226983 ZNF263 JASPAR yes 21232282
chr17 38226962 38226983 ZNF263 JASPAR yes 54191200
chr17 38226964 38226985 ZNF263 JASPAR yes 12398
chr17 38226964 38226985 ZNF263 JASPAR yes 21232283
chr17 38226964 38226985 ZNF263 JASPAR yes 54191201
chr17 38226965 38226975 SP1 JASPAR yes 12399
chr17 38226965 38226975 SP1 JASPAR yes 21232284
chr17 38226965 38226975 SP1 JASPAR yes 54191202
chr17 38226965 38226986 ZNF263 JASPAR yes 12400
chr17 38226965 38226986 ZNF263 JASPAR yes 21232285
chr17 38226965 38226986 ZNF263 JASPAR yes 54191203
chr17 38226966 38226971 ETS2 TRANSFAC yes 12401
chr17 38226966 38226971 ETS2 TRANSFAC yes 21232286
chr17 38226966 38226971 ETS2 TRANSFAC yes 54191204
chr17 38226967 38226982 PRDM1 JASPAR yes 12402
chr17 38226967 38226982 PRDM1 JASPAR yes 21232287
chr17 38226967 38226982 PRDM1 JASPAR yes 54191205
chr17 38226974 38226985 E2F6 JASPAR yes 12403
chr17 38226974 38226985 E2F6 JASPAR yes 21232288
chr17 38226974 38226985 E2F6 JASPAR yes 54191206
chr17 38226980 38226990 TBX21 JASPAR yes 12404
chr17 38226980 38226990 TBX21 JASPAR yes 21232289
chr17 38226980 38226990 TBX21 JASPAR yes 54191207
chr17 38226980 38226991 TBX20 JASPAR yes 12405
chr17 38226980 38226991 TBX2 JASPAR yes 12406
chr17 38226980 38226991 TBX20 JASPAR yes 21232290
chr17 38226980 38226991 TBX2 JASPAR yes 21232291
chr17 38226980 38226991 TBX20 JASPAR yes 54191208
chr17 38226980 38226991 TBX2 JASPAR yes 54191209
chr17 38226980 38226993 EOMES JASPAR yes 12407
chr17 38226980 38226993 EOMES JASPAR yes 21232292
chr17 38226980 38226993 EOMES JASPAR yes 54191210
chr17 38226981 38226989 MGA JASPAR yes 12408
chr17 38226981 38226989 TBX15 JASPAR yes 12409
chr17 38226981 38226989 TBX1 JASPAR yes 12410
chr17 38226981 38226989 TBX4 JASPAR yes 12411
chr17 38226981 38226989 TBX5 JASPAR yes 12412
chr17 38226981 38226989 MGA JASPAR yes 21232293
chr17 38226981 38226989 TBX15 JASPAR yes 21232294
chr17 38226981 38226989 TBX1 JASPAR yes 21232295
chr17 38226981 38226989 TBX4 JASPAR yes 21232296
chr17 38226981 38226989 TBX5 JASPAR yes 21232297
chr17 38226981 38226989 MGA JASPAR yes 54191211
chr17 38226981 38226989 TBX15 JASPAR yes 54191212
chr17 38226981 38226989 TBX1 JASPAR yes 54191213
chr17 38226981 38226989 TBX4 JASPAR yes 54191214
chr17 38226981 38226989 TBX5 JASPAR yes 54191215
chr17 38226981 38226991 TBR1 JASPAR yes 12413
chr17 38226981 38226991 TBR1 JASPAR yes 21232298
chr17 38226981 38226991 TBR1 JASPAR yes 54191216
chr17 38226991 38227006 RUNX2 JASPAR yes 12414
chr17 38226991 38227006 RUNX2 JASPAR yes 21232299
chr17 38226991 38227006 RUNX2 JASPAR yes 54191217
chr17 38227000 38227015 MEF2A JASPAR yes 12415
chr17 38227000 38227015 MEF2A JASPAR yes 21232300
chr17 38227000 38227015 MEF2A JASPAR yes 54191218
chr17 38227001 38227016 MEF2A JASPAR yes 12416
chr17 38227001 38227016 MEF2A JASPAR yes 21232301
chr17 38227001 38227016 MEF2A JASPAR yes 54191219
chr17 38227002 38227014 MEF2A JASPAR yes 12417
chr17 38227002 38227014 MEF2B JASPAR yes 12418
chr17 38227002 38227014 MEF2D JASPAR yes 12419
chr17 38227002 38227014 MEF2A JASPAR yes 21232302
chr17 38227002 38227014 MEF2B JASPAR yes 21232303
chr17 38227002 38227014 MEF2D JASPAR yes 21232304
chr17 38227002 38227014 MEF2A JASPAR yes 54191220
chr17 38227002 38227014 MEF2B JASPAR yes 54191221
chr17 38227002 38227014 MEF2D JASPAR yes 54191222
chr17 38227003 38227013 MEF2A JASPAR yes 12420
chr17 38227003 38227013 MEF2A JASPAR yes 21232305
chr17 38227003 38227013 MEF2A JASPAR yes 54191223
chr17 38227018 38227038 ESR1 JASPAR yes 12421
chr17 38227018 38227038 ESR1 JASPAR yes 21232306
chr17 38227018 38227038 ESR1 JASPAR yes 54191224
chr17 38227033 38227045 TAL1 JASPAR yes 12422
chr17 38227033 38227045 TAL1 JASPAR yes 21232307
chr17 38227033 38227045 TAL1 JASPAR yes 54191225
chr17 38227035 38227045 FIGLA JASPAR yes 12423
chr17 38227035 38227045 MSC JASPAR yes 12424
chr17 38227035 38227045 MYF6 JASPAR yes 12425
chr17 38227035 38227045 TFAP4 JASPAR yes 12426
chr17 38227035 38227045 FIGLA JASPAR yes 21232308
chr17 38227035 38227045 MSC JASPAR yes 21232309
chr17 38227035 38227045 MYF6 JASPAR yes 21232310
chr17 38227035 38227045 TFAP4 JASPAR yes 21232311
chr17 38227035 38227045 FIGLA JASPAR yes 54191226
chr17 38227035 38227045 MSC JASPAR yes 54191227
chr17 38227035 38227045 MYF6 JASPAR yes 54191228
chr17 38227035 38227045 TFAP4 JASPAR yes 54191229
chr17 38227037 38227056 RFX2 JASPAR yes 12427
chr17 38227037 38227056 RFX2 JASPAR yes 21232312
chr17 38227037 38227056 RFX2 JASPAR yes 54191230
chr17 38227039 38227047 MEIS2 JASPAR yes 12428
chr17 38227039 38227047 MEIS3 JASPAR yes 12429
chr17 38227039 38227047 MEIS2 JASPAR yes 21232313
chr17 38227039 38227047 MEIS3 JASPAR yes 21232314
chr17 38227039 38227047 MEIS2 JASPAR yes 54191231
chr17 38227039 38227047 MEIS3 JASPAR yes 54191232
chr17 38227039 38227054 RFX5 JASPAR yes 12430
chr17 38227039 38227054 RFX5 JASPAR yes 21232315
chr17 38227039 38227054 RFX5 JASPAR yes 54191233
chr17 38227040 38227044 NFE TRANSFAC yes 12431
chr17 38227040 38227044 NFE TRANSFAC yes 21232316
chr17 38227040 38227044 NFE TRANSFAC yes 54191234
chr17 38227041 38227057 RFX2 JASPAR yes 12432
chr17 38227041 38227057 RFX3 JASPAR yes 12433
chr17 38227041 38227057 RFX4 JASPAR yes 12434
chr17 38227041 38227057 RFX5 JASPAR yes 12435
chr17 38227041 38227057 RFX2 JASPAR yes 21232317
chr17 38227041 38227057 RFX3 JASPAR yes 21232318
chr17 38227041 38227057 RFX4 JASPAR yes 21232319
chr17 38227041 38227057 RFX5 JASPAR yes 21232320
chr17 38227041 38227057 RFX2 JASPAR yes 54191235
chr17 38227041 38227057 RFX3 JASPAR yes 54191236
chr17 38227041 38227057 RFX4 JASPAR yes 54191237
chr17 38227041 38227057 RFX5 JASPAR yes 54191238
chr17 38227042 38227061 RFX2 JASPAR yes 12436
chr17 38227042 38227061 RFX2 JASPAR yes 21232321
chr17 38227042 38227061 RFX2 JASPAR yes 54191239
chr17 38227044 38227049 MYC TRANSFAC yes 12437
chr17 38227044 38227049 MYC TRANSFAC yes 21232322
chr17 38227044 38227049 MYC TRANSFAC yes 54191240
chr17 38227057 38227078 ZNF263 JASPAR yes 12438
chr17 38227057 38227078 ZNF263 JASPAR yes 21232323
chr17 38227057 38227078 ZNF263 JASPAR yes 54191241
chr17 38227063 38227068 SP1 TRANSFAC yes 12439
chr17 38227063 38227068 SP1 TRANSFAC yes 21232324
chr17 38227063 38227068 SP1 TRANSFAC yes 54191242
chr17 38227066 38227076 SP1 JASPAR yes 12440
chr17 38227066 38227076 SP1 JASPAR yes 21232325
chr17 38227066 38227076 SP1 JASPAR yes 54191243
chr17 38227067 38227077 SP1 JASPAR yes 12441
chr17 38227067 38227077 SP1 JASPAR yes 21232326
chr17 38227067 38227077 SP1 JASPAR yes 54191244
chr17 38227068 38227074 SP1 TRANSFAC yes 12442
chr17 38227068 38227074 SP1 TRANSFAC yes 21232327
chr17 38227068 38227074 SP1 TRANSFAC yes 54191245
chr17 38227068 38227078 SP1 JASPAR yes 12443
chr17 38227068 38227078 SP1 JASPAR yes 21232328
chr17 38227068 38227078 SP1 JASPAR yes 54191246
chr17 38227069 38227079 SP1 JASPAR yes 12444
chr17 38227069 38227079 SP1 JASPAR yes 21232329
chr17 38227069 38227079 SP1 JASPAR yes 54191247
chr17 38227072 38227084 TFAP2A JASPAR yes 12445
chr17 38227072 38227084 TFAP2A JASPAR yes 21232330
chr17 38227072 38227084 TFAP2A JASPAR yes 54191248
chr17 38227090 38227095 SP1 TRANSFAC yes 12446
chr17 38227090 38227095 SP1 TRANSFAC yes 21232331
chr17 38227090 38227095 SP1 TRANSFAC yes 54191249
chr17 38227131 38227137 LEF1 TRANSFAC yes 12447
chr17 38227131 38227137 SOX10 JASPAR yes 12448
chr17 38227131 38227137 LEF1 TRANSFAC yes 21232332
chr17 38227131 38227137 SOX10 JASPAR yes 21232333
chr17 38227131 38227137 LEF1 TRANSFAC yes 54191250
chr17 38227131 38227137 SOX10 JASPAR yes 54191251
chr17 38227135 38227156 IRF1 JASPAR yes 12449
chr17 38227135 38227156 IRF1 JASPAR yes 21232334
chr17 38227135 38227156 IRF1 JASPAR yes 54191252
chr17 38227137 38227152 PRDM1 JASPAR yes 12450
chr17 38227137 38227152 PRDM1 JASPAR yes 21232335
chr17 38227137 38227152 PRDM1 JASPAR yes 54191253
chr17 38227140 38227161 ZNF263 JASPAR yes 12451
chr17 38227140 38227161 ZNF263 JASPAR yes 21232336
chr17 38227140 38227161 ZNF263 JASPAR yes 54191254
chr17 38227145 38227166 ZNF263 JASPAR yes 12452
chr17 38227145 38227166 ZNF263 JASPAR yes 21232337
chr17 38227145 38227166 ZNF263 JASPAR yes 54191255
chr17 38227148 38227154 SOX10 JASPAR yes 12453
chr17 38227148 38227154 SOX10 JASPAR yes 21232338
chr17 38227148 38227154 SOX10 JASPAR yes 54191256
chr17 38227153 38227163 MZF1 JASPAR yes 12454
chr17 38227153 38227163 MZF1 JASPAR yes 21232339
chr17 38227153 38227163 MZF1 JASPAR yes 54191257
chr17 38227156 38227162 SP1 TRANSFAC yes 12455
chr17 38227156 38227162 SP1 TRANSFAC yes 21232340
chr17 38227156 38227162 SP1 TRANSFAC yes 54191258
chr17 38227156 38227166 SP1 JASPAR yes 12456
chr17 38227156 38227166 SP1 JASPAR yes 21232341
chr17 38227156 38227166 SP1 JASPAR yes 54191259
chr17 38227160 38227181 ZNF263 JASPAR yes 12457
chr17 38227160 38227181 ZNF263 JASPAR yes 21232342
chr17 38227160 38227181 ZNF263 JASPAR yes 54191260
chr17 38227175 38227196 ZNF263 JASPAR yes 12458
chr17 38227175 38227196 ZNF263 JASPAR yes 21232343
chr17 38227175 38227196 ZNF263 JASPAR yes 54191261
chr17 38227178 38227199 ZNF263 JASPAR yes 12459
chr17 38227178 38227199 ZNF263 JASPAR yes 21232344
chr17 38227178 38227199 ZNF263 JASPAR yes 54191262
chr17 38227181 38227189 GATA3 JASPAR yes 12460
chr17 38227181 38227189 GATA3 JASPAR yes 21232345
chr17 38227181 38227189 GATA3 JASPAR yes 54191263
SNP sites on vista24680[chr17:38226807-38227182]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38226815 rs191469316 C T
NRF1 RFX5
4865019
chr17 38226817 rs564153648 T G
NRF1 PAX9 RFX5
4865020
chr17 38226855 rs12450388 T C no 4865021
chr17 38226879 rs183986271 G A
ELF1
4865022
chr17 38226893 rs188453876 C T no 4865023
chr17 38227100 rs552457005 TAGAC T no 4865024
chr17 38227173 rs114834604 C G
ZNF263
4865025
Genes possibly regulated by vista24680[chr17:38226807-38227182]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38137050 38154213 + PSMD3 ENSG00000108344.10 38137050 0.53 1.0 15754 10243
chr17 38171614 38174066 + CSF3 ENSG00000108342.8 38171614 0.95 0.99 15755 44807
chr17 38175350 38217468 - MED24 ENSG00000008838.13 38217468 0.65 1.0 15756 90661
chr17 38214543 38250120 + THRA ENSG00000126351.8 38214543 0.69 1.0 15757 87736
chr17 38249040 38256978 - NR1D1 ENSG00000126368.5 38256978 0.77 1.0 15758 70204
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 48631
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 30611
Expression level of Genes
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miRNAs possibly regulated by vista24680[chr17:38226807-38227182]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results