EnhancerDB
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  3. vista24681[chr17:38227405-38227627]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24681[chr17:38227405-38227627]
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Tissue distribution of vista24681
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Transcription factor that possibly regulate vista24681[chr17:38227405-38227627]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38227401 38227416 RUNX2 JASPAR yes 12517
chr17 38227401 38227416 RUNX2 JASPAR yes 21232346
chr17 38227401 38227416 RUNX2 JASPAR yes 54191320
chr17 38227445 38227460 HNF4G JASPAR yes 12518
chr17 38227445 38227460 NR2C2 JASPAR yes 12519
chr17 38227445 38227460 HNF4G JASPAR yes 21232347
chr17 38227445 38227460 NR2C2 JASPAR yes 21232348
chr17 38227445 38227460 HNF4G JASPAR yes 54191321
chr17 38227445 38227460 NR2C2 JASPAR yes 54191322
chr17 38227446 38227460 NR2F1 JASPAR yes 12520
chr17 38227446 38227460 RXRB JASPAR yes 12521
chr17 38227446 38227460 RXRG JASPAR yes 12522
chr17 38227446 38227460 NR2F1 JASPAR yes 21232349
chr17 38227446 38227460 RXRB JASPAR yes 21232350
chr17 38227446 38227460 RXRG JASPAR yes 21232351
chr17 38227446 38227460 NR2F1 JASPAR yes 54191323
chr17 38227446 38227460 RXRB JASPAR yes 54191324
chr17 38227446 38227460 RXRG JASPAR yes 54191325
chr17 38227446 38227461 HNF4A JASPAR yes 12523
chr17 38227446 38227461 HNF4A JASPAR yes 21232352
chr17 38227446 38227461 HNF4A JASPAR yes 54191326
chr17 38227450 38227456 SOX10 JASPAR yes 12524
chr17 38227450 38227456 SOX10 JASPAR yes 21232353
chr17 38227450 38227456 SOX10 JASPAR yes 54191327
chr17 38227452 38227467 HNF4G JASPAR yes 12525
chr17 38227452 38227467 HNF4G JASPAR yes 21232354
chr17 38227452 38227467 HNF4G JASPAR yes 54191328
chr17 38227453 38227467 NR2F1 JASPAR yes 12526
chr17 38227453 38227467 NR2F1 JASPAR yes 21232355
chr17 38227453 38227467 NR2F1 JASPAR yes 54191329
chr17 38227460 38227465 SP1 TRANSFAC yes 12527
chr17 38227460 38227465 SP1 TRANSFAC yes 21232356
chr17 38227460 38227465 SP1 TRANSFAC yes 54191330
chr17 38227473 38227478 SP1 TRANSFAC yes 12528
chr17 38227473 38227478 SP1 TRANSFAC yes 21232357
chr17 38227473 38227478 SP1 TRANSFAC yes 54191331
chr17 38227475 38227490 HNF4G JASPAR yes 12529
chr17 38227475 38227490 HNF4G JASPAR yes 21232358
chr17 38227475 38227490 HNF4G JASPAR yes 54191332
chr17 38227476 38227481 SP1 TRANSFAC yes 12530
chr17 38227476 38227481 SP1 TRANSFAC yes 21232359
chr17 38227476 38227481 SP1 TRANSFAC yes 54191333
chr17 38227476 38227491 HNF4A JASPAR yes 12531
chr17 38227476 38227491 HNF4A JASPAR yes 21232360
chr17 38227476 38227491 HNF4A JASPAR yes 54191334
chr17 38227511 38227521 GCM2 JASPAR yes 12532
chr17 38227511 38227521 GCM2 JASPAR yes 21232361
chr17 38227511 38227521 GCM2 JASPAR yes 54191335
chr17 38227511 38227522 GCM1 JASPAR yes 12533
chr17 38227511 38227522 GCM1 JASPAR yes 21232362
chr17 38227511 38227522 GCM1 JASPAR yes 54191336
chr17 38227519 38227536 ZNF410 JASPAR yes 12534
chr17 38227519 38227536 ZNF410 JASPAR yes 21232363
chr17 38227519 38227536 ZNF410 JASPAR yes 54191337
chr17 38227539 38227544 TFAP2A TRANSFAC yes 12535
chr17 38227539 38227544 TFAP2A TRANSFAC yes 21232364
chr17 38227539 38227544 TFAP2A TRANSFAC yes 54191338
chr17 38227539 38227545 MZF1 JASPAR yes 12536
chr17 38227539 38227545 MZF1 JASPAR yes 21232365
chr17 38227539 38227545 MZF1 JASPAR yes 54191339
chr17 38227571 38227585 PLAG1 JASPAR yes 12537
chr17 38227571 38227585 PLAG1 JASPAR yes 21232366
chr17 38227571 38227585 PLAG1 JASPAR yes 54191340
chr17 38227572 38227586 EBF1 JASPAR yes 12538
chr17 38227572 38227586 EBF1 JASPAR yes 21232367
chr17 38227572 38227586 EBF1 JASPAR yes 54191341
chr17 38227580 38227591 NFKB1 JASPAR yes 12539
chr17 38227580 38227591 NFKB1 JASPAR yes 21232368
chr17 38227580 38227591 NFKB1 JASPAR yes 54191342
SNP sites on vista24681[chr17:38227405-38227627]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38227444 rs116143714 A G no 4865028
chr17 38227525 rs192872488 T C
ZNF410
4865029
Genes possibly regulated by vista24681[chr17:38227405-38227627]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38137050 38154213 + PSMD3 ENSG00000108344.10 38137050 0.53 1.0 15754 9645
chr17 38171614 38174066 + CSF3 ENSG00000108342.8 38171614 0.95 0.99 15755 44209
chr17 38175350 38217468 - MED24 ENSG00000008838.13 38217468 0.65 1.0 15756 90063
chr17 38214543 38250120 + THRA ENSG00000126351.8 38214543 0.69 1.0 15757 87138
chr17 38249040 38256978 - NR1D1 ENSG00000126368.5 38256978 0.77 1.0 15758 70649
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 49076
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 31056
Expression level of Genes
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miRNAs possibly regulated by vista24681[chr17:38227405-38227627]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results