EnhancerDB
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  3. vista24682[chr17:38227745-38227903]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24682[chr17:38227745-38227903]
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Tissue distribution of vista24682
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Transcription factor that possibly regulate vista24682[chr17:38227745-38227903]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38227753 38227763 MSC JASPAR yes 12553
chr17 38227753 38227763 MSC JASPAR yes 21232369
chr17 38227753 38227763 MSC JASPAR yes 54191356
chr17 38227755 38227769 GATA2 JASPAR yes 12554
chr17 38227755 38227769 GATA2 JASPAR yes 21232370
chr17 38227755 38227769 GATA2 JASPAR yes 54191357
chr17 38227759 38227767 GATA3 JASPAR yes 12555
chr17 38227759 38227767 GATA5 JASPAR yes 12556
chr17 38227759 38227767 GATA3 JASPAR yes 21232371
chr17 38227759 38227767 GATA5 JASPAR yes 21232372
chr17 38227759 38227767 GATA3 JASPAR yes 54191358
chr17 38227759 38227767 GATA5 JASPAR yes 54191359
chr17 38227771 38227782 E2F6 JASPAR yes 12557
chr17 38227771 38227782 E2F6 JASPAR yes 21232373
chr17 38227771 38227782 E2F6 JASPAR yes 54191360
chr17 38227780 38227795 RFX5 JASPAR yes 12558
chr17 38227780 38227795 RFX5 JASPAR yes 21232374
chr17 38227780 38227795 RFX5 JASPAR yes 54191361
chr17 38227798 38227807 SNAI2 JASPAR yes 12559
chr17 38227798 38227807 SNAI2 JASPAR yes 21232375
chr17 38227798 38227807 SNAI2 JASPAR yes 54191362
chr17 38227798 38227808 FIGLA JASPAR yes 12560
chr17 38227798 38227808 TCF4 JASPAR yes 12561
chr17 38227798 38227808 FIGLA JASPAR yes 21232376
chr17 38227798 38227808 TCF4 JASPAR yes 21232377
chr17 38227798 38227808 FIGLA JASPAR yes 54191363
chr17 38227798 38227808 TCF4 JASPAR yes 54191364
chr17 38227800 38227809 ZEB1 JASPAR yes 12562
chr17 38227800 38227809 ZEB1 JASPAR yes 21232378
chr17 38227800 38227809 ZEB1 JASPAR yes 54191365
chr17 38227802 38227807 SP1 TRANSFAC yes 12563
chr17 38227802 38227807 SP1 TRANSFAC yes 21232379
chr17 38227802 38227807 SP1 TRANSFAC yes 54191366
chr17 38227803 38227821 ESR2 JASPAR yes 12564
chr17 38227803 38227821 ESR2 JASPAR yes 21232380
chr17 38227803 38227821 ESR2 JASPAR yes 54191367
chr17 38227805 38227820 ESR2 JASPAR yes 12565
chr17 38227805 38227820 ESR2 JASPAR yes 21232381
chr17 38227805 38227820 ESR2 JASPAR yes 54191368
chr17 38227805 38227825 ESR1 JASPAR yes 12566
chr17 38227805 38227825 ESR1 JASPAR yes 21232382
chr17 38227805 38227825 ESR1 JASPAR yes 54191369
chr17 38227813 38227817 NFE TRANSFAC yes 12567
chr17 38227813 38227817 NFE TRANSFAC yes 21232383
chr17 38227813 38227817 NFE TRANSFAC yes 54191370
chr17 38227821 38227825 NFE TRANSFAC yes 12568
chr17 38227821 38227825 NFE TRANSFAC yes 21232384
chr17 38227821 38227825 NFE TRANSFAC yes 54191371
chr17 38227826 38227841 RFX5 JASPAR yes 12569
chr17 38227826 38227841 RFX5 JASPAR yes 21232385
chr17 38227826 38227841 RFX5 JASPAR yes 54191372
chr17 38227832 38227836 LFA1 TRANSFAC yes 12570
chr17 38227832 38227836 LFA1 TRANSFAC yes 21232386
chr17 38227832 38227836 LFA1 TRANSFAC yes 54191373
chr17 38227848 38227869 ZNF263 JASPAR yes 12571
chr17 38227848 38227869 ZNF263 JASPAR yes 21232387
chr17 38227848 38227869 ZNF263 JASPAR yes 54191374
chr17 38227850 38227860 SP1 JASPAR yes 12572
chr17 38227850 38227860 SP1 JASPAR yes 21232388
chr17 38227850 38227860 SP1 JASPAR yes 54191375
chr17 38227852 38227857 SP1 TRANSFAC yes 12573
chr17 38227852 38227857 SP1 TRANSFAC yes 21232389
chr17 38227852 38227857 SP1 TRANSFAC yes 54191376
chr17 38227852 38227858 SP1 TRANSFAC yes 12574
chr17 38227852 38227858 SP1 TRANSFAC yes 21232390
chr17 38227852 38227858 SP1 TRANSFAC yes 54191377
chr17 38227852 38227859 SP1 TRANSFAC yes 12575
chr17 38227852 38227859 SP1 TRANSFAC yes 21232391
chr17 38227852 38227859 SP1 TRANSFAC yes 54191378
chr17 38227854 38227868 PLAG1 JASPAR yes 12576
chr17 38227854 38227868 PLAG1 JASPAR yes 21232392
chr17 38227854 38227868 PLAG1 JASPAR yes 54191379
chr17 38227872 38227876 LFA1 TRANSFAC yes 12577
chr17 38227872 38227876 LFA1 TRANSFAC yes 21232393
chr17 38227872 38227876 LFA1 TRANSFAC yes 54191380
chr17 38227879 38227890 E2F6 JASPAR yes 12578
chr17 38227879 38227890 E2F6 JASPAR yes 21232394
chr17 38227879 38227890 E2F6 JASPAR yes 54191381
SNP sites on vista24682[chr17:38227745-38227903]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38227862 rs145071143 C T
PLAG1 ZNF263
4865032
Genes possibly regulated by vista24682[chr17:38227745-38227903]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38137050 38154213 + PSMD3 ENSG00000108344.10 38137050 0.53 1.0 15754 9305
chr17 38171614 38174066 + CSF3 ENSG00000108342.8 38171614 0.95 0.99 15755 43869
chr17 38175350 38217468 - MED24 ENSG00000008838.13 38217468 0.65 1.0 15756 89723
chr17 38214543 38250120 + THRA ENSG00000126351.8 38214543 0.69 1.0 15757 86798
chr17 38249040 38256978 - NR1D1 ENSG00000126368.5 38256978 0.77 1.0 15758 70925
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 49352
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 31332
Expression level of Genes
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miRNAs possibly regulated by vista24682[chr17:38227745-38227903]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results