EnhancerDB
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  3. vista24683[chr17:38229285-38229466]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24683[chr17:38229285-38229466]
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Tissue distribution of vista24683
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Transcription factor that possibly regulate vista24683[chr17:38229285-38229466]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38228409 38229521 POLR2A UCSC Txn Factor no Conserved 107687984
chr17 38228409 38229521 POLR2A UCSC Txn Factor no Conserved 108253932
chr17 38229281 38229545 USF1 UCSC Txn Factor no Conserved 108253945
chr17 38229300 38229304 H1TF2 TRANSFAC yes 21232395
chr17 38229300 38229304 NFE TRANSFAC yes 21232396
chr17 38229300 38229304 SRF TRANSFAC yes 21232397
chr17 38229300 38229304 H1TF2 TRANSFAC yes 54191640
chr17 38229300 38229304 NFE TRANSFAC yes 54191641
chr17 38229300 38229304 SRF TRANSFAC yes 54191642
chr17 38229313 38229334 ZNF263 JASPAR yes 21232398
chr17 38229313 38229334 ZNF263 JASPAR yes 54191643
chr17 38229318 38229333 PRDM1 JASPAR yes 21232399
chr17 38229318 38229333 PRDM1 JASPAR yes 54191644
chr17 38229318 38229339 ZNF263 JASPAR yes 21232400
chr17 38229318 38229339 ZNF263 JASPAR yes 54191645
chr17 38229326 38229337 E2F6 JASPAR yes 21232401
chr17 38229326 38229337 E2F6 JASPAR yes 54191646
chr17 38229326 38229347 ZNF263 JASPAR yes 21232402
chr17 38229326 38229347 ZNF263 JASPAR yes 54191647
chr17 38229338 38229352 GATA2 JASPAR yes 21232403
chr17 38229338 38229352 GATA2 JASPAR yes 54191648
chr17 38229356 38229366 SP1 JASPAR yes 21232404
chr17 38229356 38229366 SP1 JASPAR yes 54191649
chr17 38229359 38229364 SP1 TRANSFAC yes 21232405
chr17 38229359 38229364 SP1 TRANSFAC yes 54191650
chr17 38229362 38229367 SP1 TRANSFAC yes 21232406
chr17 38229362 38229367 SP1 TRANSFAC yes 54191651
chr17 38229369 38229383 PLAG1 JASPAR yes 21232407
chr17 38229369 38229383 PLAG1 JASPAR yes 54191652
chr17 38229370 38229375 SP1 TRANSFAC yes 21232408
chr17 38229370 38229375 SP1 TRANSFAC yes 54191653
chr17 38229370 38229384 PLAG1 JASPAR yes 21232409
chr17 38229370 38229384 PLAG1 JASPAR yes 54191654
chr17 38229399 38229413 CREB3 JASPAR yes 21232410
chr17 38229399 38229413 CREB3L1 JASPAR yes 21232411
chr17 38229399 38229413 CREB3 JASPAR yes 54191655
chr17 38229399 38229413 CREB3L1 JASPAR yes 54191656
chr17 38229400 38229410 MAX JASPAR yes 21232412
chr17 38229400 38229410 MAX JASPAR yes 54191657
chr17 38229400 38229411 USF1 JASPAR yes 21232413
chr17 38229400 38229411 USF2 JASPAR yes 21232414
chr17 38229400 38229411 USF1 JASPAR yes 54191658
chr17 38229400 38229411 USF2 JASPAR yes 54191659
chr17 38229400 38229412 HES7 JASPAR yes 21232415
chr17 38229400 38229412 HES7 JASPAR yes 54191660
chr17 38229401 38229411 BHLHE40 JASPAR yes 21232416
chr17 38229401 38229411 BHLHE41 JASPAR yes 21232417
chr17 38229401 38229411 HEY1 JASPAR yes 21232418
chr17 38229401 38229411 HEY2 JASPAR yes 21232419
chr17 38229401 38229411 MAX JASPAR yes 21232420
chr17 38229401 38229411 MLXIPL JASPAR yes 21232421
chr17 38229401 38229411 MLX JASPAR yes 21232422
chr17 38229401 38229411 MNT JASPAR yes 21232423
chr17 38229401 38229411 SREBF2 JASPAR yes 21232424
chr17 38229401 38229411 TFE3 JASPAR yes 21232425
chr17 38229401 38229411 TFEB JASPAR yes 21232426
chr17 38229401 38229411 TFEC JASPAR yes 21232427
chr17 38229401 38229411 BHLHE40 JASPAR yes 54191661
chr17 38229401 38229411 BHLHE41 JASPAR yes 54191662
chr17 38229401 38229411 HEY1 JASPAR yes 54191663
chr17 38229401 38229411 HEY2 JASPAR yes 54191664
chr17 38229401 38229411 MAX JASPAR yes 54191665
chr17 38229401 38229411 MLXIPL JASPAR yes 54191666
chr17 38229401 38229411 MLX JASPAR yes 54191667
chr17 38229401 38229411 MNT JASPAR yes 54191668
chr17 38229401 38229411 SREBF2 JASPAR yes 54191669
chr17 38229401 38229411 TFE3 JASPAR yes 54191670
chr17 38229401 38229411 TFEB JASPAR yes 54191671
chr17 38229401 38229411 TFEC JASPAR yes 54191672
chr17 38229401 38229412 USF1 JASPAR yes 21232428
chr17 38229401 38229412 USF2 JASPAR yes 21232429
chr17 38229401 38229412 USF1 JASPAR yes 54191673
chr17 38229401 38229412 USF2 JASPAR yes 54191674
chr17 38229402 38229409 USF1 JASPAR yes 21232430
chr17 38229402 38229409 USF1 JASPAR yes 54191675
chr17 38229402 38229412 MAX JASPAR yes 21232431
chr17 38229402 38229412 MAX JASPAR yes 54191676
chr17 38229403 38229408 MYC TRANSFAC yes 21232432
chr17 38229403 38229408 USF1 TRANSFAC yes 21232433
chr17 38229403 38229408 USF2 TRANSFAC yes 21232434
chr17 38229403 38229408 MYC TRANSFAC yes 54191677
chr17 38229403 38229408 USF1 TRANSFAC yes 54191678
chr17 38229403 38229408 USF2 TRANSFAC yes 54191679
chr17 38229430 38229435 TFAP2A TRANSFAC yes 21232435
chr17 38229430 38229435 TFAP2A TRANSFAC yes 54191680
chr17 38229430 38229436 MZF1 JASPAR yes 21232436
chr17 38229430 38229436 MZF1 JASPAR yes 54191681
chr17 38229439 38229454 HNF4A JASPAR yes 21232437
chr17 38229439 38229454 HNF4A JASPAR yes 54191682
chr17 38229440 38229454 PLAG1 JASPAR yes 21232438
chr17 38229440 38229454 RXRG JASPAR yes 21232439
chr17 38229440 38229454 PLAG1 JASPAR yes 54191683
chr17 38229440 38229454 RXRG JASPAR yes 54191684
chr17 38229440 38229455 HNF4G JASPAR yes 21232440
chr17 38229440 38229455 NR2C2 JASPAR yes 21232441
chr17 38229440 38229455 HNF4G JASPAR yes 54191685
chr17 38229440 38229455 NR2C2 JASPAR yes 54191686
chr17 38229444 38229450 SOX10 JASPAR yes 21232442
chr17 38229444 38229450 SOX10 JASPAR yes 54191687
chr17 38229448 38229458 MZF1 JASPAR yes 21232443
chr17 38229448 38229458 MZF1 JASPAR yes 54191688
chr17 38229450 38229470 RREB1 JASPAR yes 21232444
chr17 38229450 38229470 RREB1 JASPAR yes 54191689
chr17 38229451 38229457 SP1 TRANSFAC yes 21232445
chr17 38229451 38229457 SP1 TRANSFAC yes 54191690
chr17 38229451 38229461 SP1 JASPAR yes 21232446
chr17 38229451 38229461 SP1 JASPAR yes 54191691
chr17 38229464 38229472 TBX5 JASPAR yes 21232447
chr17 38229464 38229472 TBX5 JASPAR yes 54191692
chr17 38229464 38229473 ZEB1 JASPAR yes 21232448
chr17 38229464 38229473 ZEB1 JASPAR yes 54191693
chr17 38229464 38229477 ZBTB18 JASPAR yes 21232449
chr17 38229464 38229477 ZBTB18 JASPAR yes 54191694
chr17 38229465 38229475 ID4 JASPAR yes 21232450
chr17 38229465 38229475 NHLH1 JASPAR yes 21232451
chr17 38229465 38229475 TCF3 JASPAR yes 21232452
chr17 38229465 38229475 TCF4 JASPAR yes 21232453
chr17 38229465 38229475 ID4 JASPAR yes 54191695
chr17 38229465 38229475 NHLH1 JASPAR yes 54191696
chr17 38229465 38229475 TCF3 JASPAR yes 54191697
chr17 38229465 38229475 TCF4 JASPAR yes 54191698
chr17 38229466 38229475 SNAI2 JASPAR yes 21232454
chr17 38229466 38229475 SNAI2 JASPAR yes 54191699
SNP sites on vista24683[chr17:38229285-38229466]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38229431 rs9892030 T C
MZF1 POLR2A TFAP2A USF1
4865053
chr17 38229464 rs115243007 G A
POLR2A RREB1 TBX5 USF1 ZBTB18 ZEB1
4865054
Genes possibly regulated by vista24683[chr17:38229285-38229466]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38137050 38154213 + PSMD3 ENSG00000108344.10 38137050 0.53 1.0 15754 7765
chr17 38171614 38174066 + CSF3 ENSG00000108342.8 38171614 0.95 0.99 15755 42329
chr17 38175350 38217468 - MED24 ENSG00000008838.13 38217468 0.65 1.0 15756 88183
chr17 38214543 38250120 + THRA ENSG00000126351.8 38214543 0.69 1.0 15757 85258
chr17 38249040 38256978 - NR1D1 ENSG00000126368.5 38256978 0.77 1.0 15758 72488
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 50915
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 32895
Expression level of Genes
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miRNAs possibly regulated by vista24683[chr17:38229285-38229466]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results