EnhancerDB
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  3. vista24684[chr17:38231838-38232188]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24684[chr17:38231838-38232188]
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Tissue distribution of vista24684
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Transcription factor that possibly regulate vista24684[chr17:38231838-38232188]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38231393 38232123 NR3C1 UCSC Txn Factor no Conserved 108253949
chr17 38231736 38232090 TCF12 UCSC Txn Factor no Conserved 108253970
chr17 38231748 38232130 CTCF UCSC Txn Factor no Conserved 108253976
chr17 38231761 38232091 CHD2 UCSC Txn Factor no Conserved 108253980
chr17 38231794 38232098 RAD21 UCSC Txn Factor no Conserved 108253987
chr17 38231805 38232111 SMC3 UCSC Txn Factor no Conserved 108253993
chr17 38231833 38231848 HSF1 JASPAR yes 21232455
chr17 38231833 38231848 HSF1 JASPAR yes 54192029
chr17 38231834 38231847 HSF2 JASPAR yes 21232456
chr17 38231834 38231847 HSF2 JASPAR yes 54192030
chr17 38231839 38231854 AR JASPAR yes 21232457
chr17 38231839 38231854 AR JASPAR yes 54192031
chr17 38231868 38231880 TEAD1 JASPAR yes 21232458
chr17 38231868 38231880 TEAD1 JASPAR yes 54192032
chr17 38231871 38231879 TEAD3 JASPAR yes 21232459
chr17 38231871 38231879 TEAD3 JASPAR yes 54192033
chr17 38231905 38231911 SP1 TRANSFAC yes 21232460
chr17 38231905 38231911 SP1 TRANSFAC yes 54192034
chr17 38231905 38231915 SP1 JASPAR yes 21232461
chr17 38231905 38231915 SP1 JASPAR yes 54192035
chr17 38231906 38231927 ZNF263 JASPAR yes 21232462
chr17 38231906 38231927 ZNF263 JASPAR yes 54192036
chr17 38231907 38231928 ZNF263 JASPAR yes 21232463
chr17 38231907 38231928 ZNF263 JASPAR yes 54192037
chr17 38231909 38231930 ZNF263 JASPAR yes 21232464
chr17 38231909 38231930 ZNF263 JASPAR yes 54192038
chr17 38231912 38231933 ZNF263 JASPAR yes 21232465
chr17 38231912 38231933 ZNF263 JASPAR yes 54192039
chr17 38231916 38231933 RXRA JASPAR yes 21232466
chr17 38231916 38231933 RXRA JASPAR yes 54192040
chr17 38231920 38231930 MZF1 JASPAR yes 21232467
chr17 38231920 38231930 MZF1 JASPAR yes 54192041
chr17 38231923 38231929 SP1 TRANSFAC yes 21232468
chr17 38231923 38231929 SP1 TRANSFAC yes 54192042
chr17 38231923 38231933 SP1 JASPAR yes 21232469
chr17 38231923 38231933 SP1 JASPAR yes 54192043
chr17 38231939 38231958 CTCF JASPAR yes 21232470
chr17 38231939 38231958 CTCF JASPAR yes 54192044
chr17 38231955 38231959 NFE TRANSFAC yes 21232471
chr17 38231955 38231959 NFE TRANSFAC yes 54192045
chr17 38231955 38231960 GATA1 TRANSFAC yes 21232472
chr17 38231955 38231960 GATA1 TRANSFAC yes 54192046
chr17 38231955 38231961 GATA3 JASPAR yes 21232473
chr17 38231955 38231961 GATA3 JASPAR yes 54192047
chr17 38231995 38231998 MYB TRANSFAC yes 21232474
chr17 38231995 38231998 MYB TRANSFAC yes 54192048
chr17 38232021 38232026 SP1 TRANSFAC yes 21232475
chr17 38232021 38232026 SP1 TRANSFAC yes 54192049
chr17 38232021 38232035 PLAG1 JASPAR yes 21232476
chr17 38232021 38232035 PLAG1 JASPAR yes 54192050
chr17 38232029 38232034 SP1 TRANSFAC yes 21232477
chr17 38232029 38232034 SP1 TRANSFAC yes 54192051
chr17 38232030 38232040 SREBF1 JASPAR yes 21232478
chr17 38232030 38232040 SREBF1 JASPAR yes 54192052
chr17 38232030 38232044 NR2F1 JASPAR yes 21232479
chr17 38232030 38232044 NR2F1 JASPAR yes 54192053
chr17 38232070 38232087 ESR1 JASPAR yes 21232480
chr17 38232070 38232087 ESR1 JASPAR yes 54192054
chr17 38232070 38232088 ESR2 JASPAR yes 21232481
chr17 38232070 38232088 ESR2 JASPAR yes 54192055
chr17 38232077 38232095 RARA JASPAR yes 21232482
chr17 38232077 38232095 RARA JASPAR yes 54192056
chr17 38232079 38232087 NR4A2 JASPAR yes 21232483
chr17 38232079 38232087 NR4A2 JASPAR yes 54192057
chr17 38232080 38232094 RXRG JASPAR yes 21232484
chr17 38232080 38232094 RXRG JASPAR yes 54192058
chr17 38232080 38232095 NR2C2 JASPAR yes 21232485
chr17 38232080 38232095 NR2C2 JASPAR yes 54192059
chr17 38232095 38232105 ERF JASPAR yes 21232486
chr17 38232095 38232105 ERF JASPAR yes 54192060
chr17 38232097 38232104 SPI1 JASPAR yes 21232487
chr17 38232097 38232104 SPI1 JASPAR yes 54192061
chr17 38232116 38232122 MZF1 JASPAR yes 21232488
chr17 38232116 38232122 MZF1 JASPAR yes 54192062
chr17 38232116 38232129 TFAP2A JASPAR yes 21232489
chr17 38232116 38232129 TFAP2B JASPAR yes 21232490
chr17 38232116 38232129 TFAP2C JASPAR yes 21232491
chr17 38232116 38232129 TFAP2A JASPAR yes 54192063
chr17 38232116 38232129 TFAP2B JASPAR yes 54192064
chr17 38232116 38232129 TFAP2C JASPAR yes 54192065
chr17 38232116 38232131 ZIC3 JASPAR yes 21232492
chr17 38232116 38232131 ZIC4 JASPAR yes 21232493
chr17 38232116 38232131 ZIC3 JASPAR yes 54192066
chr17 38232116 38232131 ZIC4 JASPAR yes 54192067
chr17 38232117 38232131 ZIC1 JASPAR yes 21232494
chr17 38232117 38232131 ZIC1 JASPAR yes 54192068
chr17 38232123 38232133 SP1 JASPAR yes 21232495
chr17 38232123 38232133 SP1 JASPAR yes 54192069
chr17 38232152 38232163 ESRRA JASPAR yes 21232496
chr17 38232152 38232163 ESRRA JASPAR yes 54192070
chr17 38232161 38232181 ESR1 JASPAR yes 21232497
chr17 38232161 38232181 ESR1 JASPAR yes 54192071
chr17 38232163 38232174 ESRRA JASPAR yes 21232498
chr17 38232163 38232174 ESRRB JASPAR yes 21232499
chr17 38232163 38232174 ESRRA JASPAR yes 54192072
chr17 38232163 38232174 ESRRB JASPAR yes 54192073
chr17 38232165 38232173 NR4A2 JASPAR yes 21232500
chr17 38232165 38232173 NR4A2 JASPAR yes 54192074
chr17 38232165 38232182 ESR1 JASPAR yes 21232501
chr17 38232165 38232182 ESR1 JASPAR yes 54192075
chr17 38232165 38232183 ESR2 JASPAR yes 21232502
chr17 38232165 38232183 RARA JASPAR yes 21232503
chr17 38232165 38232183 ESR2 JASPAR yes 54192076
chr17 38232165 38232183 RARA JASPAR yes 54192077
chr17 38232166 38232181 ESR2 JASPAR yes 21232504
chr17 38232166 38232181 ESR2 JASPAR yes 54192078
chr17 38232167 38232171 ESR1 TRANSFAC yes 21232505
chr17 38232167 38232171 ESR1 TRANSFAC yes 54192079
SNP sites on vista24684[chr17:38231838-38232188]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38231853 rs939348 T C
AR CHD2 CTCF NR3C1 RAD21 SMC3 TCF12
4865081
chr17 38231940 rs143690900 A G
CHD2 CTCF NR3C1 RAD21 SMC3 TCF12
4865082
chr17 38232035 rs6416907 G C
CHD2 CTCF NR2F1 NR3C1 PLAG1 RAD21 SMC3 SREBF1 TCF12
4865083
Genes possibly regulated by vista24684[chr17:38231838-38232188]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38137050 38154213 + PSMD3 ENSG00000108344.10 38137050 0.53 1.0 15754 5212
chr17 38171614 38174066 + CSF3 ENSG00000108342.8 38171614 0.95 0.99 15755 39776
chr17 38175350 38217468 - MED24 ENSG00000008838.13 38217468 0.65 1.0 15756 85630
chr17 38214543 38250120 + THRA ENSG00000126351.8 38214543 0.69 1.0 15757 82705
chr17 38249040 38256978 - NR1D1 ENSG00000126368.5 38256978 0.77 1.0 15758 75210
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 53637
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 35617
Expression level of Genes
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miRNAs possibly regulated by vista24684[chr17:38231838-38232188]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results