EnhancerDB
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  3. vista24690[chr17:38359505-38359802]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24690[chr17:38359505-38359802]
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Tissue distribution of vista24690
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Transcription factor that possibly regulate vista24690[chr17:38359505-38359802]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38359427 38359847 GATA1 UCSC Txn Factor no Conserved 108254191
chr17 38359506 38359512 SOX10 JASPAR yes 21232830
chr17 38359506 38359512 SOX10 JASPAR yes 54198426
chr17 38359514 38359525 FOS JASPAR yes 21232831
chr17 38359514 38359525 FOSL1 JASPAR yes 21232832
chr17 38359514 38359525 JUND JASPAR yes 21232833
chr17 38359514 38359525 FOS JASPAR yes 54198427
chr17 38359514 38359525 FOSL1 JASPAR yes 54198428
chr17 38359514 38359525 JUND JASPAR yes 54198429
chr17 38359515 38359526 JUNB JASPAR yes 21232834
chr17 38359515 38359526 JUNB JASPAR yes 54198430
chr17 38359516 38359523 JUN TRANSFAC yes 21232835
chr17 38359516 38359523 JUN TRANSFAC yes 54198431
chr17 38359516 38359527 BATF JASPAR yes 21232836
chr17 38359516 38359527 BATF JASPAR yes 54198432
chr17 38359535 38359541 MZF1 JASPAR yes 21232837
chr17 38359535 38359541 MZF1 JASPAR yes 54198433
chr17 38359544 38359556 TEAD1 JASPAR yes 21232838
chr17 38359544 38359556 TEAD1 JASPAR yes 54198434
chr17 38359545 38359565 TP53 JASPAR yes 21232839
chr17 38359545 38359565 TP53 JASPAR yes 54198435
chr17 38359561 38359575 GATA2 JASPAR yes 21232840
chr17 38359561 38359575 GATA2 JASPAR yes 54198436
chr17 38359563 38359569 GATA1 TRANSFAC yes 21232841
chr17 38359563 38359569 GATA1 TRANSFAC yes 54198437
chr17 38359572 38359577 GATA2 JASPAR yes 21232842
chr17 38359572 38359577 GATA2 JASPAR yes 54198438
chr17 38359577 38359581 LFA1 TRANSFAC yes 21232843
chr17 38359577 38359581 LFA1 TRANSFAC yes 54198439
chr17 38359582 38359593 ELK4 JASPAR yes 21232844
chr17 38359582 38359593 FLI1 JASPAR yes 21232845
chr17 38359582 38359593 ELK4 JASPAR yes 54198440
chr17 38359582 38359593 FLI1 JASPAR yes 54198441
chr17 38359583 38359593 GABPA JASPAR yes 21232846
chr17 38359583 38359593 GABPA JASPAR yes 54198442
chr17 38359583 38359596 ELF1 JASPAR yes 21232847
chr17 38359583 38359596 ELF1 JASPAR yes 54198443
chr17 38359597 38359606 NFIX JASPAR yes 21232848
chr17 38359597 38359606 NFIX JASPAR yes 54198444
chr17 38359599 38359605 NFIC JASPAR yes 21232849
chr17 38359599 38359605 NFIC JASPAR yes 54198445
chr17 38359616 38359622 ETS1 JASPAR yes 21232850
chr17 38359616 38359622 ETS1 JASPAR yes 54198446
chr17 38359642 38359657 HNF4A JASPAR yes 21232851
chr17 38359642 38359657 HNF4A JASPAR yes 54198447
chr17 38359643 38359657 NR2F1 JASPAR yes 21232852
chr17 38359643 38359657 NR2F1 JASPAR yes 54198448
chr17 38359643 38359658 HNF4G JASPAR yes 21232853
chr17 38359643 38359658 HNF4G JASPAR yes 54198449
chr17 38359647 38359653 TCF4 TRANSFAC yes 21232854
chr17 38359647 38359653 TCF4 TRANSFAC yes 54198450
chr17 38359652 38359663 FLI1 JASPAR yes 21232855
chr17 38359652 38359663 FLI1 JASPAR yes 54198451
chr17 38359661 38359669 GMEB2 JASPAR yes 21232856
chr17 38359661 38359669 GMEB2 JASPAR yes 54198452
chr17 38359666 38359675 SRY JASPAR yes 21232857
chr17 38359666 38359675 SRY JASPAR yes 54198453
chr17 38359678 38359694 POU4F3 JASPAR yes 21232858
chr17 38359678 38359694 POU4F3 JASPAR yes 54198454
chr17 38359681 38359696 HNF1A JASPAR yes 21232859
chr17 38359681 38359696 HNF1A JASPAR yes 54198455
chr17 38359682 38359695 HNF1B JASPAR yes 21232860
chr17 38359682 38359695 HNF1B JASPAR yes 54198456
chr17 38359706 38359710 TEAD2 TRANSFAC yes 21232861
chr17 38359706 38359710 TEAD2 TRANSFAC yes 54198457
chr17 38359708 38359711 MYB TRANSFAC yes 21232862
chr17 38359708 38359711 MYB TRANSFAC yes 54198458
chr17 38359708 38359721 ZBTB18 JASPAR yes 21232863
chr17 38359708 38359721 ZBTB18 JASPAR yes 54198459
chr17 38359710 38359722 TAL1 JASPAR yes 21232864
chr17 38359710 38359722 TAL1 JASPAR yes 54198460
chr17 38359717 38359722 GATA1 TRANSFAC yes 21232865
chr17 38359717 38359722 GATA1 TRANSFAC yes 54198461
chr17 38359734 38359740 LEF1 TRANSFAC yes 21232866
chr17 38359734 38359740 TCF4 TRANSFAC yes 21232867
chr17 38359734 38359740 LEF1 TRANSFAC yes 54198462
chr17 38359734 38359740 TCF4 TRANSFAC yes 54198463
chr17 38359736 38359749 DUXA JASPAR yes 21232868
chr17 38359736 38359749 DUXA JASPAR yes 54198464
chr17 38359737 38359748 DUX4 JASPAR yes 21232869
chr17 38359737 38359748 DUX4 JASPAR yes 54198465
chr17 38359758 38359761 MYB TRANSFAC yes 21232870
chr17 38359758 38359761 MYB TRANSFAC yes 54198466
chr17 38359759 38359777 MAFF JASPAR yes 21232871
chr17 38359759 38359777 MAFF JASPAR yes 54198467
chr17 38359760 38359775 MAFK JASPAR yes 21232872
chr17 38359760 38359775 MAFK JASPAR yes 54198468
chr17 38359764 38359775 NRL JASPAR yes 21232873
chr17 38359764 38359775 NRL JASPAR yes 54198469
chr17 38359773 38359777 YY1 TRANSFAC yes 21232874
chr17 38359773 38359777 YY1 TRANSFAC yes 54198470
chr17 38359780 38359784 TEAD2 TRANSFAC yes 21232875
chr17 38359780 38359784 TEAD2 TRANSFAC yes 54198471
chr17 38359782 38359785 MYB TRANSFAC yes 21232876
chr17 38359782 38359785 MYB TRANSFAC yes 54198472
chr17 38359790 38359805 AR JASPAR yes 21232877
chr17 38359790 38359805 AR JASPAR yes 54198473
SNP sites on vista24690[chr17:38359505-38359802]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38359520 rs8073925 G C
BATF FOS FOSL1 GATA1 JUN JUNB JUND
4865649
chr17 38359622 rs77930215 G A
ETS1 GATA1
4865650
Genes possibly regulated by vista24690[chr17:38359505-38359802]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 19046
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 37066
chr17 38333263 38351908 + RAPGEFL1 ENSG00000108352.7 38333263 0.92 1.0 15761 73758
chr17 38375556 38440388 + WIPF2 ENSG00000171475.9 38375556 0.73 1.0 15762 84246
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 0.9 0.99 15763 15917
Expression level of Genes
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miRNAs possibly regulated by vista24690[chr17:38359505-38359802]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 38349895 38349915 + hsa-miR-6867-3p MIMAT0027635 38333804 0.0085249995122998 0.0 0.0 702
Expression level of miRNAs
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