EnhancerDB
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  3. vista2470[chr1:93332118-93332439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2470[chr1:93332118-93332439]
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Tissue distribution of vista2470
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Transcription factor that possibly regulate vista2470[chr1:93332118-93332439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 93332123 93332129 NFIC JASPAR yes 118329257
chr1 93332160 93332171 FOXA1 JASPAR yes 118329258
chr1 93332161 93332173 FOXC2 JASPAR yes 118329259
chr1 93332162 93332174 FOXI1 JASPAR yes 118329260
chr1 93332166 93332182 SOX4 JASPAR yes 118329261
chr1 93332167 93332182 SOX21 JASPAR yes 118329262
chr1 93332176 93332191 RFX5 JASPAR yes 118329263
chr1 93332192 93332196 YY1 TRANSFAC yes 118329264
chr1 93332199 93332212 DUXA JASPAR yes 118329265
chr1 93332200 93332211 PHOX2A JASPAR yes 118329266
chr1 93332203 93332213 ALX3 JASPAR yes 118329267
chr1 93332203 93332213 GSX1 JASPAR yes 118329268
chr1 93332203 93332213 GSX2 JASPAR yes 118329269
chr1 93332203 93332213 HOXB2 JASPAR yes 118329270
chr1 93332203 93332213 HOXB3 JASPAR yes 118329271
chr1 93332203 93332213 MEOX2 JASPAR yes 118329272
chr1 93332203 93332213 MIXL1 JASPAR yes 118329273
chr1 93332203 93332213 MNX1 JASPAR yes 118329274
chr1 93332203 93332214 HOXA10 JASPAR yes 118329275
chr1 93332204 93332212 LMX1A JASPAR yes 118329276
chr1 93332204 93332212 LMX1B JASPAR yes 118329277
chr1 93332204 93332212 NKX6-1 JASPAR yes 118329278
chr1 93332204 93332212 NKX6-2 JASPAR yes 118329279
chr1 93332204 93332212 PDX1 JASPAR yes 118329280
chr1 93332204 93332212 VAX1 JASPAR yes 118329281
chr1 93332204 93332212 VAX2 JASPAR yes 118329282
chr1 93332204 93332212 VSX1 JASPAR yes 118329283
chr1 93332204 93332214 HOXD13 JASPAR yes 118329284
chr1 93332222 93332227 MYC TRANSFAC yes 118329285
chr1 93332242 93332247 GATA2 JASPAR yes 118329286
chr1 93332248 93332254 GATA3 JASPAR yes 118329287
chr1 93332275 93332280 MYC TRANSFAC yes 118329288
chr1 93332307 93332312 ETS2 TRANSFAC yes 118329289
chr1 93332348 93332352 H1TF2 TRANSFAC yes 118329290
chr1 93332348 93332352 NFE TRANSFAC yes 118329291
chr1 93332348 93332352 SRF TRANSFAC yes 118329292
chr1 93332356 93332367 NFKB1 JASPAR yes 118329293
chr1 93332373 93332381 EHF JASPAR yes 118329294
chr1 93332390 93332404 ONECUT2 JASPAR yes 118329295
chr1 93332421 93332434 ZBTB18 JASPAR yes 118329296
chr1 93332430 93332434 TEAD2 TRANSFAC yes 118329297
chr1 93332430 93332435 TBP TRANSFAC yes 118329298
SNP sites on vista2470[chr1:93332118-93332439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 93332143 rs187792873 G A no 485197
chr1 93332153 rs144734156 C T no 485198
chr1 93332166 rs537460576 C A
FOXA1 FOXC2 FOXI1 SOX4
485199
chr1 93332168 rs148102603 A G
FOXA1 FOXC2 FOXI1 SOX21 SOX4
485200
Genes possibly regulated by vista2470[chr1:93332118-93332439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 92974253 93257961 - EVI5 ENSG00000067208.10 93257961 0.82 0.98 899 25843
chr1 93297582 93307481 + RPL5 ENSG00000122406.8 93297582 0.78 0.99 900 65464
chr1 93307724 93427057 - FAM69A ENSG00000154511.7 93427057 0.7 0.98 901 5382
Expression level of Genes
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miRNAs possibly regulated by vista2470[chr1:93332118-93332439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results