EnhancerDB
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  3. vista24705[chr17:38482426-38483282]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24705[chr17:38482426-38483282]
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Tissue distribution of vista24705
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Transcription factor that possibly regulate vista24705[chr17:38482426-38483282]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38482357 38482674 EBF1 UCSC Txn Factor no Conserved 108254685
chr17 38482463 38482703 FOXA1 UCSC Txn Factor no Conserved 108254697
chr17 38482495 38482768 HDAC2 UCSC Txn Factor no Conserved 108254700
chr17 38482506 38482745 NR2F2 UCSC Txn Factor no Conserved 108254703
chr17 38482417 38482432 PRDM1 JASPAR yes 21234248
chr17 38482417 38482432 PRDM1 JASPAR yes 54205986
chr17 38482445 38482449 LFA1 TRANSFAC yes 21234249
chr17 38482445 38482449 LFA1 TRANSFAC yes 54205987
chr17 38482471 38482476 TFAP2A TRANSFAC yes 21234250
chr17 38482471 38482476 TFAP2A TRANSFAC yes 54205988
chr17 38482471 38482477 MZF1 JASPAR yes 21234251
chr17 38482471 38482477 MZF1 JASPAR yes 54205989
chr17 38482487 38482492 MYC TRANSFAC yes 21234252
chr17 38482487 38482492 MYC TRANSFAC yes 54205990
chr17 38482488 38482508 TP53 JASPAR yes 21234253
chr17 38482488 38482508 TP53 JASPAR yes 54205991
chr17 38482495 38482506 NFKB1 JASPAR yes 21234254
chr17 38482495 38482506 NFKB1 JASPAR yes 54205992
chr17 38482506 38482515 NFIX JASPAR yes 21234255
chr17 38482506 38482515 NFIX JASPAR yes 54205993
chr17 38482506 38482516 NFIA JASPAR yes 21234256
chr17 38482506 38482516 NFIA JASPAR yes 54205994
chr17 38482508 38482514 NFIC JASPAR yes 21234257
chr17 38482508 38482514 NFIC JASPAR yes 54205995
chr17 38482513 38482534 REST JASPAR yes 21234258
chr17 38482513 38482534 REST JASPAR yes 54205996
chr17 38482525 38482535 REL JASPAR yes 21234259
chr17 38482525 38482535 REL JASPAR yes 54205997
chr17 38482527 38482544 BCL6B JASPAR yes 21234260
chr17 38482527 38482544 BCL6B JASPAR yes 54205998
chr17 38482536 38482547 ELK4 JASPAR yes 21234261
chr17 38482536 38482547 FLI1 JASPAR yes 21234262
chr17 38482536 38482547 ELK4 JASPAR yes 54205999
chr17 38482536 38482547 FLI1 JASPAR yes 54206000
chr17 38482537 38482547 ERF JASPAR yes 21234263
chr17 38482537 38482547 ERG JASPAR yes 21234264
chr17 38482537 38482547 ETS1 JASPAR yes 21234265
chr17 38482537 38482547 ETV3 JASPAR yes 21234266
chr17 38482537 38482547 FEV JASPAR yes 21234267
chr17 38482537 38482547 FLI1 JASPAR yes 21234268
chr17 38482537 38482547 GABPA JASPAR yes 21234269
chr17 38482537 38482547 ERF JASPAR yes 54206001
chr17 38482537 38482547 ERG JASPAR yes 54206002
chr17 38482537 38482547 ETS1 JASPAR yes 54206003
chr17 38482537 38482547 ETV3 JASPAR yes 54206004
chr17 38482537 38482547 FEV JASPAR yes 54206005
chr17 38482537 38482547 FLI1 JASPAR yes 54206006
chr17 38482537 38482547 GABPA JASPAR yes 54206007
chr17 38482537 38482548 ETV2 JASPAR yes 21234270
chr17 38482537 38482548 ETV2 JASPAR yes 54206008
chr17 38482537 38482550 ELF1 JASPAR yes 21234271
chr17 38482537 38482550 ELF1 JASPAR yes 54206009
chr17 38482538 38482545 SPI1 JASPAR yes 21234272
chr17 38482538 38482545 SPI1 JASPAR yes 54206010
chr17 38482538 38482546 EHF JASPAR yes 21234273
chr17 38482538 38482546 FEV JASPAR yes 21234274
chr17 38482538 38482546 EHF JASPAR yes 54206011
chr17 38482538 38482546 FEV JASPAR yes 54206012
chr17 38482543 38482547 NFE TRANSFAC yes 21234275
chr17 38482543 38482547 NFE TRANSFAC yes 54206013
chr17 38482579 38482596 RXRA JASPAR yes 21234276
chr17 38482579 38482596 RXRA JASPAR yes 54206014
chr17 38482587 38482601 FOXF2 JASPAR yes 21234277
chr17 38482587 38482601 FOXF2 JASPAR yes 54206015
chr17 38482587 38482602 FOXP1 JASPAR yes 21234278
chr17 38482587 38482602 FOXP1 JASPAR yes 54206016
chr17 38482590 38482601 FOXP2 JASPAR yes 21234279
chr17 38482590 38482601 FOXP2 JASPAR yes 54206017
chr17 38482592 38482599 FOXD2 JASPAR yes 21234280
chr17 38482592 38482599 FOXI1 JASPAR yes 21234281
chr17 38482592 38482599 FOXL1 JASPAR yes 21234282
chr17 38482592 38482599 FOXO4 JASPAR yes 21234283
chr17 38482592 38482599 FOXO6 JASPAR yes 21234284
chr17 38482592 38482599 FOXP3 JASPAR yes 21234285
chr17 38482592 38482599 FOXD2 JASPAR yes 54206018
chr17 38482592 38482599 FOXI1 JASPAR yes 54206019
chr17 38482592 38482599 FOXL1 JASPAR yes 54206020
chr17 38482592 38482599 FOXO4 JASPAR yes 54206021
chr17 38482592 38482599 FOXO6 JASPAR yes 54206022
chr17 38482592 38482599 FOXP3 JASPAR yes 54206023
chr17 38482592 38482600 FOXD1 JASPAR yes 21234286
chr17 38482592 38482600 FOXO3 JASPAR yes 21234287
chr17 38482592 38482600 FOXD1 JASPAR yes 54206024
chr17 38482592 38482600 FOXO3 JASPAR yes 54206025
chr17 38482595 38482605 NEUROG2 JASPAR yes 21234288
chr17 38482595 38482605 NEUROG2 JASPAR yes 54206026
chr17 38482596 38482615 REST JASPAR yes 21234289
chr17 38482596 38482615 REST JASPAR yes 54206027
chr17 38482621 38482631 CEBPB JASPAR yes 21234290
chr17 38482621 38482631 CEBPD JASPAR yes 21234291
chr17 38482621 38482631 CEBPE JASPAR yes 21234292
chr17 38482621 38482631 CEBPB JASPAR yes 54206028
chr17 38482621 38482631 CEBPD JASPAR yes 54206029
chr17 38482621 38482631 CEBPE JASPAR yes 54206030
chr17 38482628 38482636 NR4A2 JASPAR yes 21234293
chr17 38482628 38482636 NR4A2 JASPAR yes 54206031
chr17 38482630 38482634 ESR1 TRANSFAC yes 21234294
chr17 38482630 38482634 ESR1 TRANSFAC yes 54206032
chr17 38482655 38482673 RARA JASPAR yes 21234295
chr17 38482655 38482673 RARA JASPAR yes 54206033
chr17 38482663 38482669 ETS1 JASPAR yes 21234296
chr17 38482663 38482669 SPI1 JASPAR yes 21234297
chr17 38482663 38482669 ETS1 JASPAR yes 54206034
chr17 38482663 38482669 SPI1 JASPAR yes 54206035
chr17 38482670 38482685 HSF1 JASPAR yes 21234298
chr17 38482670 38482685 HSF1 JASPAR yes 54206036
chr17 38482671 38482684 HSF4 JASPAR yes 21234299
chr17 38482671 38482684 HSF4 JASPAR yes 54206037
chr17 38482704 38482719 PRDM1 JASPAR yes 21234300
chr17 38482704 38482719 PRDM1 JASPAR yes 54206038
chr17 38482724 38482732 TBX5 JASPAR yes 21234301
chr17 38482724 38482732 TBX5 JASPAR yes 54206039
chr17 38482744 38482747 MYB TRANSFAC yes 21234302
chr17 38482744 38482747 MYB TRANSFAC yes 54206040
chr17 38482752 38482756 LFA1 TRANSFAC yes 21234303
chr17 38482752 38482756 LFA1 TRANSFAC yes 54206041
chr17 38482784 38482799 HSF1 JASPAR yes 21234304
chr17 38482784 38482799 HSF1 JASPAR yes 54206042
chr17 38482799 38482817 ESR1 JASPAR yes 21234305
chr17 38482799 38482817 ESR1 JASPAR yes 54206043
chr17 38482818 38482837 PAX5 JASPAR yes 21234306
chr17 38482818 38482837 PAX5 JASPAR yes 54206044
chr17 38482820 38482824 LFA1 TRANSFAC yes 21234307
chr17 38482820 38482824 LFA1 TRANSFAC yes 54206045
chr17 38482841 38482850 SNAI2 JASPAR yes 21234308
chr17 38482841 38482850 SNAI2 JASPAR yes 54206046
chr17 38482841 38482851 ID4 JASPAR yes 21234309
chr17 38482841 38482851 TCF3 JASPAR yes 21234310
chr17 38482841 38482851 TCF4 JASPAR yes 21234311
chr17 38482841 38482851 ID4 JASPAR yes 54206047
chr17 38482841 38482851 TCF3 JASPAR yes 54206048
chr17 38482841 38482851 TCF4 JASPAR yes 54206049
chr17 38482853 38482865 INSM1 JASPAR yes 21234312
chr17 38482853 38482865 INSM1 JASPAR yes 54206050
chr17 38482889 38482905 SRF JASPAR yes 21234313
chr17 38482889 38482905 SRF JASPAR yes 54206051
chr17 38482892 38482904 SRF JASPAR yes 21234314
chr17 38482892 38482904 SRF JASPAR yes 54206052
chr17 38482903 38482911 TBX5 JASPAR yes 21234315
chr17 38482903 38482911 TBX5 JASPAR yes 54206053
chr17 38482908 38482923 RUNX2 JASPAR yes 21234316
chr17 38482908 38482923 RUNX2 JASPAR yes 54206054
chr17 38482912 38482922 RUNX3 JASPAR yes 21234317
chr17 38482912 38482922 RUNX3 JASPAR yes 54206055
chr17 38482913 38482922 RUNX2 JASPAR yes 21234318
chr17 38482913 38482922 RUNX2 JASPAR yes 54206056
chr17 38482928 38482939 EBF1 JASPAR yes 21234319
chr17 38482928 38482939 EBF1 JASPAR yes 54206057
chr17 38482932 38482952 ESR1 JASPAR yes 21234320
chr17 38482932 38482952 ESR1 JASPAR yes 54206058
chr17 38482934 38482940 MAZ TRANSFAC yes 21234321
chr17 38482934 38482940 MAZ TRANSFAC yes 54206059
chr17 38482938 38482953 TFAP2A JASPAR yes 21234322
chr17 38482938 38482953 TFAP2A JASPAR yes 54206060
chr17 38482941 38482953 TFAP2A JASPAR yes 21234323
chr17 38482941 38482953 TFAP2B JASPAR yes 21234324
chr17 38482941 38482953 TFAP2C JASPAR yes 21234325
chr17 38482941 38482953 TFAP2A JASPAR yes 54206061
chr17 38482941 38482953 TFAP2B JASPAR yes 54206062
chr17 38482941 38482953 TFAP2C JASPAR yes 54206063
chr17 38482941 38482956 TFAP2A JASPAR yes 21234326
chr17 38482941 38482956 TFAP2A JASPAR yes 54206064
chr17 38482948 38482952 LFA1 TRANSFAC yes 21234327
chr17 38482948 38482952 LFA1 TRANSFAC yes 54206065
chr17 38482979 38482994 RUNX2 JASPAR yes 21234328
chr17 38482979 38482994 RUNX2 JASPAR yes 54206066
chr17 38482981 38483001 RREB1 JASPAR yes 21234329
chr17 38482981 38483001 RREB1 JASPAR yes 54206067
chr17 38482983 38482993 GCM2 JASPAR yes 21234330
chr17 38482983 38482993 GCM2 JASPAR yes 54206068
chr17 38482983 38482994 GCM1 JASPAR yes 21234331
chr17 38482983 38482994 GCM1 JASPAR yes 54206069
chr17 38482991 38483005 STAT1 JASPAR yes 21234332
chr17 38482991 38483005 STAT1 JASPAR yes 54206070
chr17 38482993 38483008 FOXP1 JASPAR yes 21234333
chr17 38482993 38483008 FOXP1 JASPAR yes 54206071
chr17 38482994 38483003 SRY JASPAR yes 21234334
chr17 38482994 38483003 SRY JASPAR yes 54206072
chr17 38482994 38483005 FOXP2 JASPAR yes 21234335
chr17 38482994 38483005 FOXP2 JASPAR yes 54206073
chr17 38482996 38483004 FOXO3 JASPAR yes 21234336
chr17 38482996 38483004 FOXO3 JASPAR yes 54206074
chr17 38482998 38483009 E2F6 JASPAR yes 21234337
chr17 38482998 38483009 E2F6 JASPAR yes 54206075
chr17 38483000 38483021 REST JASPAR yes 21234338
chr17 38483000 38483021 REST JASPAR yes 54206076
chr17 38483001 38483020 REST JASPAR yes 21234339
chr17 38483001 38483020 REST JASPAR yes 54206077
chr17 38483013 38483031 IRF2 JASPAR yes 21234340
chr17 38483013 38483031 IRF2 JASPAR yes 54206078
chr17 38483016 38483031 STAT2 JASPAR yes 21234341
chr17 38483016 38483031 STAT2 JASPAR yes 54206079
chr17 38483017 38483031 STAT1 JASPAR yes 21234342
chr17 38483017 38483031 STAT1 JASPAR yes 54206080
chr17 38483018 38483030 IRF1 JASPAR yes 21234343
chr17 38483018 38483030 IRF1 JASPAR yes 54206081
chr17 38483061 38483071 SP1 JASPAR yes 21234344
chr17 38483061 38483071 SP1 JASPAR yes 54206082
chr17 38483068 38483073 SP1 TRANSFAC yes 21234345
chr17 38483068 38483073 SP1 TRANSFAC yes 54206083
chr17 38483072 38483082 ID4 JASPAR yes 21234346
chr17 38483072 38483082 ID4 JASPAR yes 54206084
chr17 38483090 38483094 ESR1 TRANSFAC yes 21234347
chr17 38483090 38483094 ESR1 TRANSFAC yes 54206085
chr17 38483118 38483133 AR JASPAR yes 21234348
chr17 38483118 38483133 AR JASPAR yes 54206086
chr17 38483137 38483149 GLI2 JASPAR yes 21234349
chr17 38483137 38483149 GLI2 JASPAR yes 54206087
chr17 38483148 38483152 ESR1 TRANSFAC yes 21234350
chr17 38483148 38483152 ESR1 TRANSFAC yes 54206088
chr17 38483188 38483203 HNF4A JASPAR yes 21234351
chr17 38483188 38483203 HNF4A JASPAR yes 54206089
chr17 38483189 38483203 TLX1 JASPAR yes 21234352
chr17 38483189 38483203 TLX1 JASPAR yes 54206090
chr17 38483189 38483204 HNF4G JASPAR yes 21234353
chr17 38483189 38483204 HNF4G JASPAR yes 54206091
chr17 38483194 38483201 E2F1 TRANSFAC yes 21234354
chr17 38483194 38483201 E2F1 TRANSFAC yes 54206092
chr17 38483201 38483205 YY1 TRANSFAC yes 21234355
chr17 38483201 38483205 YY1 TRANSFAC yes 54206093
chr17 38483205 38483218 NR2F1 JASPAR yes 21234356
chr17 38483205 38483218 NR2F1 JASPAR yes 54206094
chr17 38483206 38483224 RARA JASPAR yes 21234357
chr17 38483206 38483224 RARA JASPAR yes 54206095
chr17 38483207 38483218 ESRRA JASPAR yes 21234358
chr17 38483207 38483218 ESRRB JASPAR yes 21234359
chr17 38483207 38483218 ESRRA JASPAR yes 54206096
chr17 38483207 38483218 ESRRB JASPAR yes 54206097
chr17 38483208 38483216 NR4A2 JASPAR yes 21234360
chr17 38483208 38483216 NR4A2 JASPAR yes 54206098
chr17 38483208 38483223 HNF4A JASPAR yes 21234361
chr17 38483208 38483223 HNF4A JASPAR yes 54206099
chr17 38483209 38483219 RORA JASPAR yes 21234362
chr17 38483209 38483219 RORA JASPAR yes 54206100
chr17 38483209 38483223 NR2F1 JASPAR yes 21234363
chr17 38483209 38483223 RXRB JASPAR yes 21234364
chr17 38483209 38483223 RXRG JASPAR yes 21234365
chr17 38483209 38483223 NR2F1 JASPAR yes 54206101
chr17 38483209 38483223 RXRB JASPAR yes 54206102
chr17 38483209 38483223 RXRG JASPAR yes 54206103
chr17 38483209 38483224 HNF4G JASPAR yes 21234366
chr17 38483209 38483224 HNF4G JASPAR yes 54206104
chr17 38483209 38483226 RARA JASPAR yes 21234367
chr17 38483209 38483226 RARA JASPAR yes 54206105
chr17 38483218 38483232 ZIC1 JASPAR yes 21234368
chr17 38483218 38483232 ZIC1 JASPAR yes 54206106
chr17 38483218 38483233 ZIC3 JASPAR yes 21234369
chr17 38483218 38483233 ZIC4 JASPAR yes 21234370
chr17 38483218 38483233 ZIC3 JASPAR yes 54206107
chr17 38483218 38483233 ZIC4 JASPAR yes 54206108
chr17 38483235 38483256 REST JASPAR yes 21234371
chr17 38483235 38483256 REST JASPAR yes 54206109
chr17 38483236 38483255 REST JASPAR yes 21234372
chr17 38483236 38483255 REST JASPAR yes 54206110
chr17 38483238 38483252 EBF1 JASPAR yes 21234373
chr17 38483238 38483252 EBF1 JASPAR yes 54206111
chr17 38483239 38483250 EBF1 JASPAR yes 21234374
chr17 38483239 38483250 EBF1 JASPAR yes 54206112
chr17 38483240 38483246 MZF1 JASPAR yes 21234375
chr17 38483240 38483246 MZF1 JASPAR yes 54206113
chr17 38483248 38483259 BATF JASPAR yes 21234376
chr17 38483248 38483259 BATF JASPAR yes 54206114
chr17 38483252 38483258 JUN TRANSFAC yes 21234377
chr17 38483252 38483258 JUN TRANSFAC yes 54206115
SNP sites on vista24705[chr17:38482426-38483282]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38482516 rs531855969 C T
EBF1 FOXA1 HDAC2 NFIA NR2F2 REST
4866233
chr17 38482668 rs114508843 C T
EBF1 ETS1 FOXA1 HDAC2 NR2F2 RARA SPI1
4866234
chr17 38482766 rs190676187 T C
HDAC2
4866235
chr17 38482947 rs570951267 G A
ESR1 TFAP2A TFAP2B TFAP2C
4866236
chr17 38483097 rs542521328 A T no 4866237
chr17 38483127 rs554811031 T G
AR
4866238
chr17 38483228 rs139358518 C T
ZIC1 ZIC3 ZIC4
4866239
Genes possibly regulated by vista24705[chr17:38482426-38483282]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 0.9 0.99 15763 61459
chr17 38465444 38513094 + RARA ENSG00000131759.13 38465444 0.75 1.0 15764 83018
chr17 38516907 38520945 + CTD-2267D19.3 ENSG00000266208.1 38516907 0.82 0.99 15765 66375
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 63215
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 9080
Expression level of Genes
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miRNAs possibly regulated by vista24705[chr17:38482426-38483282]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results