EnhancerDB
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  3. vista24713[chr17:38509274-38509600]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24713[chr17:38509274-38509600]
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Tissue distribution of vista24713
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Transcription factor that possibly regulate vista24713[chr17:38509274-38509600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38509019 38509559 EP300 UCSC Txn Factor no Conserved 108254770
chr17 38509156 38509432 CEBPB UCSC Txn Factor no Conserved 108254821
chr17 38509164 38509430 FOXA1 UCSC Txn Factor no Conserved 108254827
chr17 38509169 38509422 FOXA2 UCSC Txn Factor no Conserved 108254832
chr17 38509285 38509296 FOXA1 JASPAR yes 21234731
chr17 38509285 38509296 FOXA1 JASPAR yes 54209414
chr17 38509285 38509300 FOXA1 JASPAR yes 21234732
chr17 38509285 38509300 FOXA1 JASPAR yes 54209415
chr17 38509286 38509297 FOXB1 JASPAR yes 21234733
chr17 38509286 38509297 FOXC1 JASPAR yes 21234734
chr17 38509286 38509297 FOXB1 JASPAR yes 54209416
chr17 38509286 38509297 FOXC1 JASPAR yes 54209417
chr17 38509286 38509298 FOXC2 JASPAR yes 21234735
chr17 38509286 38509298 FOXC2 JASPAR yes 54209418
chr17 38509298 38509309 CEBPB JASPAR yes 21234736
chr17 38509298 38509309 CEBPB JASPAR yes 54209419
chr17 38509299 38509310 CEBPA JASPAR yes 21234737
chr17 38509299 38509310 CEBPA JASPAR yes 54209420
chr17 38509311 38509321 CUX1 JASPAR yes 21234738
chr17 38509311 38509321 CUX1 JASPAR yes 54209421
chr17 38509318 38509329 ELF5 JASPAR yes 21234739
chr17 38509318 38509329 ELF5 JASPAR yes 54209422
chr17 38509320 38509331 STAT1 JASPAR yes 21234740
chr17 38509320 38509331 STAT1 JASPAR yes 54209423
chr17 38509329 38509334 NFY TRANSFAC yes 21234741
chr17 38509329 38509334 NFY TRANSFAC yes 54209424
chr17 38509333 38509343 SP1 JASPAR yes 21234742
chr17 38509333 38509343 SP1 JASPAR yes 54209425
chr17 38509335 38509341 MAZ TRANSFAC yes 21234743
chr17 38509335 38509341 MAZ TRANSFAC yes 54209426
chr17 38509355 38509370 TFAP2C JASPAR yes 21234744
chr17 38509355 38509370 TFAP2C JASPAR yes 54209427
chr17 38509399 38509420 ZNF263 JASPAR yes 21234745
chr17 38509399 38509420 ZNF263 JASPAR yes 54209428
chr17 38509408 38509423 NR2C2 JASPAR yes 21234746
chr17 38509408 38509423 NR2C2 JASPAR yes 54209429
chr17 38509409 38509423 RXRB JASPAR yes 21234747
chr17 38509409 38509423 RXRG JASPAR yes 21234748
chr17 38509409 38509423 RXRB JASPAR yes 54209430
chr17 38509409 38509423 RXRG JASPAR yes 54209431
chr17 38509427 38509430 MYB TRANSFAC yes 21234749
chr17 38509427 38509430 MYB TRANSFAC yes 54209432
chr17 38509434 38509447 ELF1 JASPAR yes 21234750
chr17 38509434 38509447 ELF1 JASPAR yes 54209433
chr17 38509435 38509447 EHF JASPAR yes 21234751
chr17 38509435 38509447 ELF1 JASPAR yes 21234752
chr17 38509435 38509447 ELF4 JASPAR yes 21234753
chr17 38509435 38509447 EHF JASPAR yes 54209434
chr17 38509435 38509447 ELF1 JASPAR yes 54209435
chr17 38509435 38509447 ELF4 JASPAR yes 54209436
chr17 38509435 38509448 ELF3 JASPAR yes 21234754
chr17 38509435 38509448 ELF3 JASPAR yes 54209437
chr17 38509435 38509456 IRF1 JASPAR yes 21234755
chr17 38509435 38509456 IRF1 JASPAR yes 54209438
chr17 38509436 38509447 ELF5 JASPAR yes 21234756
chr17 38509436 38509447 ELF5 JASPAR yes 54209439
chr17 38509437 38509447 ERF JASPAR yes 21234757
chr17 38509437 38509447 ETS1 JASPAR yes 21234758
chr17 38509437 38509447 ETV6 JASPAR yes 21234759
chr17 38509437 38509447 GABPA JASPAR yes 21234760
chr17 38509437 38509447 ERF JASPAR yes 54209440
chr17 38509437 38509447 ETS1 JASPAR yes 54209441
chr17 38509437 38509447 ETV6 JASPAR yes 54209442
chr17 38509437 38509447 GABPA JASPAR yes 54209443
chr17 38509437 38509448 ELK4 JASPAR yes 21234761
chr17 38509437 38509448 FLI1 JASPAR yes 21234762
chr17 38509437 38509448 ELK4 JASPAR yes 54209444
chr17 38509437 38509448 FLI1 JASPAR yes 54209445
chr17 38509438 38509446 EHF JASPAR yes 21234763
chr17 38509438 38509446 FEV JASPAR yes 21234764
chr17 38509438 38509446 EHF JASPAR yes 54209446
chr17 38509438 38509446 FEV JASPAR yes 54209447
chr17 38509439 38509446 SPI1 JASPAR yes 21234765
chr17 38509439 38509446 SPI1 JASPAR yes 54209448
chr17 38509439 38509453 STAT1 JASPAR yes 21234766
chr17 38509439 38509453 STAT1 JASPAR yes 54209449
chr17 38509439 38509454 PRDM1 JASPAR yes 21234767
chr17 38509439 38509454 STAT2 JASPAR yes 21234768
chr17 38509439 38509454 PRDM1 JASPAR yes 54209450
chr17 38509439 38509454 STAT2 JASPAR yes 54209451
chr17 38509440 38509452 IRF1 JASPAR yes 21234769
chr17 38509440 38509452 IRF1 JASPAR yes 54209452
chr17 38509442 38509455 SMAD2 JASPAR yes 21234770
chr17 38509442 38509455 SMAD2 JASPAR yes 54209453
chr17 38509458 38509471 JUN JASPAR yes 21234771
chr17 38509458 38509471 JUN JASPAR yes 54209454
chr17 38509464 38509481 RARA JASPAR yes 21234772
chr17 38509464 38509481 RARA JASPAR yes 54209455
chr17 38509464 38509484 ESR1 JASPAR yes 21234773
chr17 38509464 38509484 ESR1 JASPAR yes 54209456
chr17 38509473 38509480 JUN TRANSFAC yes 21234774
chr17 38509473 38509480 JUN TRANSFAC yes 54209457
chr17 38509476 38509487 EBF1 JASPAR yes 21234775
chr17 38509476 38509487 EBF1 JASPAR yes 54209458
chr17 38509491 38509495 LFA1 TRANSFAC yes 21234776
chr17 38509491 38509495 LFA1 TRANSFAC yes 54209459
chr17 38509500 38509510 SREBF1 JASPAR yes 21234777
chr17 38509500 38509510 SREBF1 JASPAR yes 54209460
chr17 38509503 38509520 RXRA JASPAR yes 21234778
chr17 38509503 38509520 RXRA JASPAR yes 54209461
chr17 38509505 38509520 TFAP2A JASPAR yes 21234779
chr17 38509505 38509520 TFAP2A JASPAR yes 54209462
chr17 38509508 38509519 TFAP2C JASPAR yes 21234780
chr17 38509508 38509519 TFAP2C JASPAR yes 54209463
chr17 38509508 38509520 TFAP2A JASPAR yes 21234781
chr17 38509508 38509520 TFAP2B JASPAR yes 21234782
chr17 38509508 38509520 TFAP2C JASPAR yes 21234783
chr17 38509508 38509520 TFAP2A JASPAR yes 54209464
chr17 38509508 38509520 TFAP2B JASPAR yes 54209465
chr17 38509508 38509520 TFAP2C JASPAR yes 54209466
chr17 38509509 38509518 TFAP2A JASPAR yes 21234784
chr17 38509509 38509518 TFAP2A JASPAR yes 54209467
chr17 38509536 38509550 GLIS2 JASPAR yes 21234785
chr17 38509536 38509550 GLIS2 JASPAR yes 54209468
chr17 38509543 38509553 SP1 JASPAR yes 21234786
chr17 38509543 38509553 SP1 JASPAR yes 54209469
chr17 38509543 38509564 ZNF263 JASPAR yes 21234787
chr17 38509543 38509564 ZNF263 JASPAR yes 54209470
chr17 38509546 38509551 SP1 TRANSFAC yes 21234788
chr17 38509546 38509551 SP1 TRANSFAC yes 54209471
chr17 38509550 38509563 ELF1 JASPAR yes 21234789
chr17 38509550 38509563 ELF1 JASPAR yes 54209472
chr17 38509550 38509567 RXRA JASPAR yes 21234790
chr17 38509550 38509567 RXRA JASPAR yes 54209473
chr17 38509550 38509571 ZNF263 JASPAR yes 21234791
chr17 38509550 38509571 ZNF263 JASPAR yes 54209474
chr17 38509551 38509555 LFA1 TRANSFAC yes 21234792
chr17 38509551 38509555 LFA1 TRANSFAC yes 54209475
chr17 38509553 38509563 GABPA JASPAR yes 21234793
chr17 38509553 38509563 GABPA JASPAR yes 54209476
chr17 38509553 38509564 ELK4 JASPAR yes 21234794
chr17 38509553 38509564 FLI1 JASPAR yes 21234795
chr17 38509553 38509564 ELK4 JASPAR yes 54209477
chr17 38509553 38509564 FLI1 JASPAR yes 54209478
chr17 38509565 38509570 SP1 TRANSFAC yes 21234796
chr17 38509565 38509570 SP1 TRANSFAC yes 54209479
chr17 38509574 38509580 NFIC JASPAR yes 21234797
chr17 38509574 38509580 NFIC JASPAR yes 54209480
chr17 38509589 38509600 E2F6 JASPAR yes 21234798
chr17 38509589 38509600 E2F6 JASPAR yes 54209481
chr17 38509596 38509617 REST JASPAR yes 21234799
chr17 38509596 38509617 REST JASPAR yes 54209482
chr17 38509597 38509616 REST JASPAR yes 21234800
chr17 38509597 38509616 REST JASPAR yes 54209483
SNP sites on vista24713[chr17:38509274-38509600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38509383 rs570531351 G T
CEBPB EP300 FOXA1 FOXA2
4866454
chr17 38509448 rs192293346 A C
ELF3 ELK4 EP300 FLI1 IRF1 PRDM1 SMAD2 STAT1 STAT2
4866455
chr17 38509547 rs146882913 G C
EP300 GLIS2 SP1 ZNF263
4866456
Genes possibly regulated by vista24713[chr17:38509274-38509600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 0.9 0.99 15763 34611
chr17 38465444 38513094 + RARA ENSG00000131759.13 38465444 0.75 1.0 15764 56170
chr17 38516907 38520945 + CTD-2267D19.3 ENSG00000266208.1 38516907 0.82 0.99 15765 92693
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 89533
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 35398
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 9898
Expression level of Genes
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miRNAs possibly regulated by vista24713[chr17:38509274-38509600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results