EnhancerDB
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  3. vista24719[chr17:38619282-38619695]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24719[chr17:38619282-38619695]
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Tissue distribution of vista24719
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Transcription factor that possibly regulate vista24719[chr17:38619282-38619695]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38616134 38619833 POLR2A UCSC Txn Factor no Conserved 108255068
chr17 38619280 38619292 E2F8 JASPAR yes 21235043
chr17 38619280 38619292 E2F8 JASPAR yes 54213711
chr17 38619280 38619294 E2F7 JASPAR yes 21235044
chr17 38619280 38619294 E2F7 JASPAR yes 54213712
chr17 38619281 38619293 E2F8 JASPAR yes 21235045
chr17 38619281 38619293 E2F8 JASPAR yes 54213713
chr17 38619300 38619306 TBP TRANSFAC yes 21235046
chr17 38619300 38619306 TBP TRANSFAC yes 54213714
chr17 38619320 38619324 H1TF2 TRANSFAC yes 21235047
chr17 38619320 38619324 NFE TRANSFAC yes 21235048
chr17 38619320 38619324 SRF TRANSFAC yes 21235049
chr17 38619320 38619324 H1TF2 TRANSFAC yes 54213715
chr17 38619320 38619324 NFE TRANSFAC yes 54213716
chr17 38619320 38619324 SRF TRANSFAC yes 54213717
chr17 38619340 38619348 FOXO3 JASPAR yes 21235050
chr17 38619340 38619348 FOXO3 JASPAR yes 54213718
chr17 38619342 38619349 NFATC2 JASPAR yes 21235051
chr17 38619342 38619349 NFATC2 JASPAR yes 54213719
chr17 38619353 38619357 YY1 TRANSFAC yes 21235052
chr17 38619353 38619357 YY1 TRANSFAC yes 54213720
chr17 38619383 38619389 TCF1 TRANSFAC yes 21235053
chr17 38619383 38619389 TCF1 TRANSFAC yes 54213721
chr17 38619390 38619402 PKNOX1 JASPAR yes 21235054
chr17 38619390 38619402 PKNOX2 JASPAR yes 21235055
chr17 38619390 38619402 TGIF1 JASPAR yes 21235056
chr17 38619390 38619402 TGIF2 JASPAR yes 21235057
chr17 38619390 38619402 PKNOX1 JASPAR yes 54213722
chr17 38619390 38619402 PKNOX2 JASPAR yes 54213723
chr17 38619390 38619402 TGIF1 JASPAR yes 54213724
chr17 38619390 38619402 TGIF2 JASPAR yes 54213725
chr17 38619391 38619402 USF1 JASPAR yes 21235058
chr17 38619391 38619402 USF2 JASPAR yes 21235059
chr17 38619391 38619402 USF1 JASPAR yes 54213726
chr17 38619391 38619402 USF2 JASPAR yes 54213727
chr17 38619392 38619402 MAX JASPAR yes 21235060
chr17 38619392 38619402 MAX JASPAR yes 54213728
chr17 38619397 38619414 RARA JASPAR yes 21235061
chr17 38619397 38619414 RXRA JASPAR yes 21235062
chr17 38619397 38619414 RARA JASPAR yes 54213729
chr17 38619397 38619414 RXRA JASPAR yes 54213730
chr17 38619404 38619417 NR2F1 JASPAR yes 21235063
chr17 38619404 38619417 NR2F1 JASPAR yes 54213731
chr17 38619406 38619417 ESRRA JASPAR yes 21235064
chr17 38619406 38619417 ESRRA JASPAR yes 54213732
chr17 38619415 38619419 H4TF2 TRANSFAC yes 21235065
chr17 38619415 38619419 H4TF2 TRANSFAC yes 54213733
chr17 38619433 38619447 GLIS2 JASPAR yes 21235066
chr17 38619433 38619447 GLIS2 JASPAR yes 54213734
chr17 38619443 38619447 ESR1 TRANSFAC yes 21235067
chr17 38619443 38619447 ESR1 TRANSFAC yes 54213735
chr17 38619444 38619454 SREBF2 JASPAR yes 21235068
chr17 38619444 38619454 SREBF2 JASPAR yes 54213736
chr17 38619488 38619498 ZNF740 JASPAR yes 21235069
chr17 38619488 38619498 ZNF740 JASPAR yes 54213737
chr17 38619508 38619514 ETS1 JASPAR yes 21235070
chr17 38619508 38619514 SPI1 JASPAR yes 21235071
chr17 38619508 38619514 ETS1 JASPAR yes 54213738
chr17 38619508 38619514 SPI1 JASPAR yes 54213739
chr17 38619520 38619531 EBF1 JASPAR yes 21235072
chr17 38619520 38619531 EBF1 JASPAR yes 54213740
chr17 38619544 38619548 NFE TRANSFAC yes 21235073
chr17 38619544 38619548 NFE TRANSFAC yes 54213741
chr17 38619549 38619558 THAP1 JASPAR yes 21235074
chr17 38619549 38619558 THAP1 JASPAR yes 54213742
chr17 38619551 38619562 NFKB1 JASPAR yes 21235075
chr17 38619551 38619562 NFKB1 JASPAR yes 54213743
chr17 38619552 38619556 LFA1 TRANSFAC yes 21235076
chr17 38619552 38619556 LFA1 TRANSFAC yes 54213744
chr17 38619552 38619562 NFKB1 JASPAR yes 21235077
chr17 38619552 38619562 NFKB1 JASPAR yes 54213745
chr17 38619575 38619583 SP1 TRANSFAC yes 21235078
chr17 38619575 38619583 SP1 TRANSFAC yes 54213746
chr17 38619575 38619585 SP1 JASPAR yes 21235079
chr17 38619575 38619585 SP1 JASPAR yes 54213747
chr17 38619575 38619596 ZNF263 JASPAR yes 21235080
chr17 38619575 38619596 ZNF263 JASPAR yes 54213748
chr17 38619577 38619583 MAZ TRANSFAC yes 21235081
chr17 38619577 38619583 MAZ TRANSFAC yes 54213749
chr17 38619591 38619599 FOXO3 JASPAR yes 21235082
chr17 38619591 38619599 FOXO3 JASPAR yes 54213750
chr17 38619622 38619639 RXRA JASPAR yes 21235083
chr17 38619622 38619639 RXRA JASPAR yes 54213751
chr17 38619629 38619634 SP1 TRANSFAC yes 21235084
chr17 38619629 38619634 SP1 TRANSFAC yes 54213752
chr17 38619630 38619635 SP1 TRANSFAC yes 21235085
chr17 38619630 38619635 SP1 TRANSFAC yes 54213753
chr17 38619656 38619670 PLAG1 JASPAR yes 21235086
chr17 38619656 38619670 PLAG1 JASPAR yes 54213754
chr17 38619672 38619683 DMRT3 JASPAR yes 21235087
chr17 38619672 38619683 DMRT3 JASPAR yes 54213755
chr17 38619682 38619686 TEAD2 TRANSFAC yes 21235088
chr17 38619682 38619686 TEAD2 TRANSFAC yes 54213756
chr17 38619682 38619687 TBP TRANSFAC yes 21235089
chr17 38619682 38619687 TBP TRANSFAC yes 54213757
chr17 38619695 38619706 TBX20 JASPAR yes 21235090
chr17 38619695 38619706 TBX20 JASPAR yes 54213758
SNP sites on vista24719[chr17:38619282-38619695]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38619290 rs78935568 C A
E2F7 E2F8 POLR2A
4867116
chr17 38619311 rs565398019 CA C
POLR2A
4867117
chr17 38619318 rs563407123 A T
POLR2A
4867118
chr17 38619574 rs563934081 A G
POLR2A
4867119
chr17 38619598 rs145799955 C CAG
FOXO3 POLR2A
4867120
chr17 38619608 rs181372211 T C
POLR2A
4867121
Genes possibly regulated by vista24719[chr17:38619282-38619695]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 785
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 54920
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 80420
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 61846
Expression level of Genes
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miRNAs possibly regulated by vista24719[chr17:38619282-38619695]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results