EnhancerDB
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  3. vista24722[chr17:38648531-38648872]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24722[chr17:38648531-38648872]
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Tissue distribution of vista24722
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Transcription factor that possibly regulate vista24722[chr17:38648531-38648872]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38648547 38648562 STAT2 JASPAR yes 21235140
chr17 38648547 38648562 STAT2 JASPAR yes 54217755
chr17 38648550 38648563 JUN JASPAR yes 21235141
chr17 38648550 38648563 JUN JASPAR yes 54217756
chr17 38648580 38648584 YY1 TRANSFAC yes 21235142
chr17 38648580 38648584 YY1 TRANSFAC yes 54217757
chr17 38648581 38648589 FEV JASPAR yes 21235143
chr17 38648581 38648589 FEV JASPAR yes 54217758
chr17 38648583 38648588 ETS2 TRANSFAC yes 21235144
chr17 38648583 38648588 ETS2 TRANSFAC yes 54217759
chr17 38648604 38648612 RHOXF1 JASPAR yes 21235145
chr17 38648604 38648612 RHOXF1 JASPAR yes 54217760
chr17 38648624 38648639 FOXP1 JASPAR yes 21235146
chr17 38648624 38648639 FOXP1 JASPAR yes 54217761
chr17 38648626 38648641 FOXP1 JASPAR yes 21235147
chr17 38648626 38648641 FOXP1 JASPAR yes 54217762
chr17 38648646 38648665 PAX5 JASPAR yes 21235148
chr17 38648646 38648665 PAX5 JASPAR yes 54217763
chr17 38648678 38648683 SP1 TRANSFAC yes 21235149
chr17 38648678 38648683 SP1 TRANSFAC yes 54217764
chr17 38648728 38648736 TBX15 JASPAR yes 21235150
chr17 38648728 38648736 TBX15 JASPAR yes 54217765
chr17 38648743 38648747 H1TF2 TRANSFAC yes 21235151
chr17 38648743 38648747 NFE TRANSFAC yes 21235152
chr17 38648743 38648747 SRF TRANSFAC yes 21235153
chr17 38648743 38648747 H1TF2 TRANSFAC yes 54217766
chr17 38648743 38648747 NFE TRANSFAC yes 54217767
chr17 38648743 38648747 SRF TRANSFAC yes 54217768
chr17 38648743 38648749 NFYC TRANSFAC yes 21235154
chr17 38648743 38648749 NFYC TRANSFAC yes 54217769
chr17 38648768 38648774 YY1 JASPAR yes 21235155
chr17 38648768 38648774 YY1 JASPAR yes 54217770
chr17 38648770 38648781 TBX20 JASPAR yes 21235156
chr17 38648770 38648781 TBX20 JASPAR yes 54217771
chr17 38648771 38648781 TBX21 JASPAR yes 21235157
chr17 38648771 38648781 TBX21 JASPAR yes 54217772
chr17 38648772 38648780 MGA JASPAR yes 21235158
chr17 38648772 38648780 TBX15 JASPAR yes 21235159
chr17 38648772 38648780 TBX1 JASPAR yes 21235160
chr17 38648772 38648780 TBX4 JASPAR yes 21235161
chr17 38648772 38648780 TBX5 JASPAR yes 21235162
chr17 38648772 38648780 MGA JASPAR yes 54217773
chr17 38648772 38648780 TBX15 JASPAR yes 54217774
chr17 38648772 38648780 TBX1 JASPAR yes 54217775
chr17 38648772 38648780 TBX4 JASPAR yes 54217776
chr17 38648772 38648780 TBX5 JASPAR yes 54217777
chr17 38648788 38648803 MEF2A JASPAR yes 21235163
chr17 38648788 38648803 MEF2A JASPAR yes 54217778
chr17 38648789 38648804 MEF2C JASPAR yes 21235164
chr17 38648789 38648804 MEF2C JASPAR yes 54217779
chr17 38648790 38648802 MEF2A JASPAR yes 21235165
chr17 38648790 38648802 MEF2B JASPAR yes 21235166
chr17 38648790 38648802 MEF2D JASPAR yes 21235167
chr17 38648790 38648802 MEF2A JASPAR yes 54217780
chr17 38648790 38648802 MEF2B JASPAR yes 54217781
chr17 38648790 38648802 MEF2D JASPAR yes 54217782
chr17 38648792 38648796 YY1 TRANSFAC yes 21235168
chr17 38648792 38648796 YY1 TRANSFAC yes 54217783
chr17 38648812 38648823 YY2 JASPAR yes 21235169
chr17 38648812 38648823 YY2 JASPAR yes 54217784
chr17 38648813 38648825 YY1 JASPAR yes 21235170
chr17 38648813 38648825 YY1 JASPAR yes 54217785
chr17 38648824 38648844 TP63 JASPAR yes 21235171
chr17 38648824 38648844 TP63 JASPAR yes 54217786
chr17 38648841 38648862 IRF1 JASPAR yes 21235172
chr17 38648841 38648862 IRF1 JASPAR yes 54217787
chr17 38648842 38648863 IRF1 JASPAR yes 21235173
chr17 38648842 38648863 IRF1 JASPAR yes 54217788
chr17 38648843 38648858 STAT2 JASPAR yes 21235174
chr17 38648843 38648858 STAT2 JASPAR yes 54217789
chr17 38648844 38648865 IRF1 JASPAR yes 21235175
chr17 38648844 38648865 IRF1 JASPAR yes 54217790
chr17 38648846 38648861 FOXP1 JASPAR yes 21235176
chr17 38648846 38648861 FOXP1 JASPAR yes 54217791
chr17 38648847 38648862 FOXP1 JASPAR yes 21235177
chr17 38648847 38648862 FOXP1 JASPAR yes 54217792
chr17 38648847 38648868 IRF1 JASPAR yes 21235178
chr17 38648847 38648868 IRF1 JASPAR yes 54217793
chr17 38648848 38648863 FOXP1 JASPAR yes 21235179
chr17 38648848 38648863 FOXP1 JASPAR yes 54217794
chr17 38648848 38648869 IRF1 JASPAR yes 21235180
chr17 38648848 38648869 IRF1 JASPAR yes 54217795
chr17 38648849 38648864 FOXP1 JASPAR yes 21235181
chr17 38648849 38648864 FOXP1 JASPAR yes 54217796
chr17 38648849 38648869 RREB1 JASPAR yes 21235182
chr17 38648849 38648869 RREB1 JASPAR yes 54217797
chr17 38648849 38648870 IRF1 JASPAR yes 21235183
chr17 38648849 38648870 IRF1 JASPAR yes 54217798
chr17 38648850 38648865 FOXP1 JASPAR yes 21235184
chr17 38648850 38648865 FOXP1 JASPAR yes 54217799
chr17 38648851 38648866 FOXP1 JASPAR yes 21235185
chr17 38648851 38648866 FOXP1 JASPAR yes 54217800
chr17 38648852 38648867 FOXP1 JASPAR yes 21235186
chr17 38648852 38648867 FOXP1 JASPAR yes 54217801
chr17 38648853 38648868 FOXP1 JASPAR yes 21235187
chr17 38648853 38648868 FOXP1 JASPAR yes 54217802
chr17 38648854 38648869 FOXP1 JASPAR yes 21235188
chr17 38648854 38648869 FOXP1 JASPAR yes 54217803
chr17 38648861 38648867 TCF4 TRANSFAC yes 21235189
chr17 38648861 38648867 TCF4 TRANSFAC yes 54217804
chr17 38648861 38648876 MEF2C JASPAR yes 21235190
chr17 38648861 38648876 MEF2C JASPAR yes 54217805
SNP sites on vista24722[chr17:38648531-38648872]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38648627 rs35057962 C CT
FOXP1
4867465
chr17 38648627 rs554257226 C CT
FOXP1
4867466
chr17 38648694 rs372588717 C T no 4867467
chr17 38648853 rs564942284 T TG
FOXP1 IRF1 RREB1 STAT2
4867468
chr17 38648862 rs573111313 T G
FOXP1 IRF1 MEF2C RREB1 TCF4
4867469
chr17 38648866 rs200912639 G T
FOXP1 IRF1 MEF2C RREB1 TCF4
4867470
Genes possibly regulated by vista24722[chr17:38648531-38648872]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 25671
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 51171
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 91023
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 27148
Expression level of Genes
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miRNAs possibly regulated by vista24722[chr17:38648531-38648872]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results