EnhancerDB
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  3. vista24723[chr17:38655848-38656036]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24723[chr17:38655848-38656036]
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Tissue distribution of vista24723
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Transcription factor that possibly regulate vista24723[chr17:38655848-38656036]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38655511 38658128 POLR2A UCSC Txn Factor no Conserved 108255120
chr17 38655511 38658128 POLR2A UCSC Txn Factor no Conserved 108255121
chr17 38655851 38655864 ATF4 JASPAR yes 21235191
chr17 38655851 38655864 ATF4 JASPAR yes 54218596
chr17 38655867 38655872 ETS2 TRANSFAC yes 21235192
chr17 38655867 38655872 ETS2 TRANSFAC yes 54218597
chr17 38655877 38655894 RARA JASPAR yes 21235193
chr17 38655877 38655894 RARA JASPAR yes 54218598
chr17 38655878 38655882 H4TF2 TRANSFAC yes 21235194
chr17 38655878 38655882 H4TF2 TRANSFAC yes 54218599
chr17 38655878 38655897 CTCF JASPAR yes 21235195
chr17 38655878 38655897 CTCF JASPAR yes 54218600
chr17 38655887 38655894 SP1 TRANSFAC yes 21235196
chr17 38655887 38655894 SP1 TRANSFAC yes 54218601
chr17 38655887 38655897 SP1 JASPAR yes 21235197
chr17 38655887 38655897 SP1 JASPAR yes 54218602
chr17 38655888 38655896 SP1 TRANSFAC yes 21235198
chr17 38655888 38655896 SP1 TRANSFAC yes 54218603
chr17 38655888 38655897 SP1 TRANSFAC yes 21235199
chr17 38655888 38655897 SP1 TRANSFAC yes 54218604
chr17 38655889 38655894 SP1 TRANSFAC yes 21235200
chr17 38655889 38655894 SP1 TRANSFAC yes 54218605
chr17 38655890 38655895 SP1 TRANSFAC yes 21235201
chr17 38655890 38655895 SP1 TRANSFAC yes 54218606
chr17 38655890 38655896 SP1 TRANSFAC yes 21235202
chr17 38655890 38655896 SP1 TRANSFAC yes 54218607
chr17 38655892 38655905 NFKB2 JASPAR yes 21235203
chr17 38655892 38655905 NFKB2 JASPAR yes 54218608
chr17 38655892 38655908 ZNF143 JASPAR yes 21235204
chr17 38655892 38655908 ZNF143 JASPAR yes 54218609
chr17 38655893 38655903 NFKB1 JASPAR yes 21235205
chr17 38655893 38655903 RELA JASPAR yes 21235206
chr17 38655893 38655903 NFKB1 JASPAR yes 54218610
chr17 38655893 38655903 RELA JASPAR yes 54218611
chr17 38655893 38655904 NFKB1 JASPAR yes 21235207
chr17 38655893 38655904 NFKB1 JASPAR yes 54218612
chr17 38655894 38655898 LFA1 TRANSFAC yes 21235208
chr17 38655894 38655898 LFA1 TRANSFAC yes 54218613
chr17 38655903 38655907 LFA1 TRANSFAC yes 21235209
chr17 38655903 38655907 LFA1 TRANSFAC yes 54218614
chr17 38655909 38655914 ETS2 TRANSFAC yes 21235210
chr17 38655909 38655914 ETS2 TRANSFAC yes 54218615
chr17 38655914 38655932 SRF JASPAR yes 21235211
chr17 38655914 38655932 SRF JASPAR yes 54218616
chr17 38655916 38655931 MEF2C JASPAR yes 21235212
chr17 38655916 38655931 MEF2C JASPAR yes 54218617
chr17 38655918 38655930 MEF2B JASPAR yes 21235213
chr17 38655918 38655930 MEF2D JASPAR yes 21235214
chr17 38655918 38655930 MEF2B JASPAR yes 54218618
chr17 38655918 38655930 MEF2D JASPAR yes 54218619
chr17 38655920 38655924 TEAD2 TRANSFAC yes 21235215
chr17 38655920 38655924 TEAD2 TRANSFAC yes 54218620
chr17 38655920 38655925 TBP TRANSFAC yes 21235216
chr17 38655920 38655925 TBP TRANSFAC yes 54218621
chr17 38655920 38655926 TMF TRANSFAC yes 21235217
chr17 38655920 38655926 TMF TRANSFAC yes 54218622
chr17 38655922 38655943 IRF1 JASPAR yes 21235218
chr17 38655922 38655943 IRF1 JASPAR yes 54218623
chr17 38655952 38655963 E2F4 JASPAR yes 21235219
chr17 38655952 38655963 E2F6 JASPAR yes 21235220
chr17 38655952 38655963 E2F4 JASPAR yes 54218624
chr17 38655952 38655963 E2F6 JASPAR yes 54218625
chr17 38655953 38655964 E2F1 JASPAR yes 21235221
chr17 38655953 38655964 E2F1 JASPAR yes 54218626
chr17 38655957 38655962 SP1 TRANSFAC yes 21235222
chr17 38655957 38655962 SP1 TRANSFAC yes 54218627
chr17 38655958 38655971 TFAP2A JASPAR yes 21235223
chr17 38655958 38655971 TFAP2A JASPAR yes 54218628
chr17 38655969 38655979 TFAP4 JASPAR yes 21235224
chr17 38655969 38655979 TFAP4 JASPAR yes 54218629
chr17 38656001 38656011 NFATC3 JASPAR yes 21235225
chr17 38656001 38656011 NFATC3 JASPAR yes 54218630
chr17 38656002 38656009 NFATC2 JASPAR yes 21235226
chr17 38656002 38656009 NFATC2 JASPAR yes 54218631
SNP sites on vista24723[chr17:38655848-38656036]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38655923 rs547184828 T C
IRF1 MEF2B MEF2C MEF2D POLR2A SRF TBP TEAD2 TMF
4867559
chr17 38655982 rs369941764 C T
POLR2A
4867560
Genes possibly regulated by vista24723[chr17:38655848-38656036]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 18354
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 43854
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 98187
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 34312
Expression level of Genes
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miRNAs possibly regulated by vista24723[chr17:38655848-38656036]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results