EnhancerDB
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  3. vista24725[chr17:38666550-38666883]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24725[chr17:38666550-38666883]
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Tissue distribution of vista24725
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Transcription factor that possibly regulate vista24725[chr17:38666550-38666883]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38666079 38666881 NR3C1 UCSC Txn Factor no Conserved 108255183
chr17 38666369 38666885 TFAP2C UCSC Txn Factor no Conserved 108255195
chr17 38666482 38666843 EP300 UCSC Txn Factor no Conserved 108255208
chr17 38666502 38666923 MYC UCSC Txn Factor no Conserved 108255211
chr17 38666529 38666811 FOSL2 UCSC Txn Factor no Conserved 108255215
chr17 38666557 38666813 FOS UCSC Txn Factor no Conserved 108255223
chr17 38666637 38666742 CREB1 UCSC Txn Factor no Conserved 108255230
chr17 38666575 38666579 NFE TRANSFAC yes 21235264
chr17 38666575 38666579 NFE TRANSFAC yes 54219319
chr17 38666576 38666586 SMAD3 JASPAR yes 21235265
chr17 38666576 38666586 SMAD3 JASPAR yes 54219320
chr17 38666597 38666610 NFKB1 JASPAR yes 21235266
chr17 38666597 38666610 NFKB2 JASPAR yes 21235267
chr17 38666597 38666610 NFKB1 JASPAR yes 54219321
chr17 38666597 38666610 NFKB2 JASPAR yes 54219322
chr17 38666598 38666609 NFKB1 JASPAR yes 21235268
chr17 38666598 38666609 NFKB1 JASPAR yes 54219323
chr17 38666599 38666603 LFA1 TRANSFAC yes 21235269
chr17 38666599 38666603 LFA1 TRANSFAC yes 54219324
chr17 38666599 38666609 NFKB1 JASPAR yes 21235270
chr17 38666599 38666609 NFKB1 JASPAR yes 54219325
chr17 38666631 38666646 TFAP2A JASPAR yes 21235271
chr17 38666631 38666646 TFAP2C JASPAR yes 21235272
chr17 38666631 38666646 TFAP2A JASPAR yes 54219326
chr17 38666631 38666646 TFAP2C JASPAR yes 54219327
chr17 38666633 38666647 TLX1 JASPAR yes 21235273
chr17 38666633 38666647 TLX1 JASPAR yes 54219328
chr17 38666635 38666644 TFAP2A JASPAR yes 21235274
chr17 38666635 38666644 TFAP2A JASPAR yes 54219329
chr17 38666644 38666655 ESRRA JASPAR yes 21235275
chr17 38666644 38666655 ESRRA JASPAR yes 54219330
chr17 38666645 38666660 JUND JASPAR yes 21235276
chr17 38666645 38666660 JUND JASPAR yes 54219331
chr17 38666646 38666659 JUN JASPAR yes 21235277
chr17 38666646 38666659 JUN JASPAR yes 54219332
chr17 38666650 38666657 JUN TRANSFAC yes 21235278
chr17 38666650 38666657 JUN TRANSFAC yes 54219333
chr17 38666657 38666671 JUN JASPAR yes 21235279
chr17 38666657 38666671 JUN JASPAR yes 54219334
chr17 38666659 38666670 BATF JASPAR yes 21235280
chr17 38666659 38666670 BATF JASPAR yes 54219335
chr17 38666660 38666671 JUNB JASPAR yes 21235281
chr17 38666660 38666671 JUNB JASPAR yes 54219336
chr17 38666661 38666672 NFE2 JASPAR yes 21235282
chr17 38666661 38666672 NFE2 JASPAR yes 54219337
chr17 38666662 38666671 JDP2 JASPAR yes 21235283
chr17 38666662 38666671 JDP2 JASPAR yes 54219338
chr17 38666670 38666684 ZIC1 JASPAR yes 21235284
chr17 38666670 38666684 ZIC1 JASPAR yes 54219339
chr17 38666670 38666685 ZIC3 JASPAR yes 21235285
chr17 38666670 38666685 ZIC4 JASPAR yes 21235286
chr17 38666670 38666685 ZIC3 JASPAR yes 54219340
chr17 38666670 38666685 ZIC4 JASPAR yes 54219341
chr17 38666681 38666694 SMAD2 JASPAR yes 21235287
chr17 38666681 38666694 SMAD2 JASPAR yes 54219342
chr17 38666686 38666698 NHLH1 JASPAR yes 21235288
chr17 38666686 38666698 NHLH1 JASPAR yes 54219343
chr17 38666687 38666697 NHLH1 JASPAR yes 21235289
chr17 38666687 38666697 NHLH1 JASPAR yes 54219344
chr17 38666693 38666699 JUN TRANSFAC yes 21235290
chr17 38666693 38666699 JUN TRANSFAC yes 54219345
chr17 38666700 38666715 AR JASPAR yes 21235291
chr17 38666700 38666715 AR JASPAR yes 54219346
chr17 38666700 38666717 NR3C1 JASPAR yes 21235292
chr17 38666700 38666717 NR3C2 JASPAR yes 21235293
chr17 38666700 38666717 NR3C1 JASPAR yes 54219347
chr17 38666700 38666717 NR3C2 JASPAR yes 54219348
chr17 38666702 38666717 AR JASPAR yes 21235294
chr17 38666702 38666717 AR JASPAR yes 54219349
chr17 38666713 38666726 EOMES JASPAR yes 21235295
chr17 38666713 38666726 EOMES JASPAR yes 54219350
chr17 38666715 38666725 TBR1 JASPAR yes 21235296
chr17 38666715 38666725 TBR1 JASPAR yes 54219351
chr17 38666715 38666726 TBX20 JASPAR yes 21235297
chr17 38666715 38666726 TBX2 JASPAR yes 21235298
chr17 38666715 38666726 TBX20 JASPAR yes 54219352
chr17 38666715 38666726 TBX2 JASPAR yes 54219353
chr17 38666716 38666726 TBX21 JASPAR yes 21235299
chr17 38666716 38666726 TBX21 JASPAR yes 54219354
chr17 38666717 38666725 MGA JASPAR yes 21235300
chr17 38666717 38666725 TBX15 JASPAR yes 21235301
chr17 38666717 38666725 TBX1 JASPAR yes 21235302
chr17 38666717 38666725 TBX4 JASPAR yes 21235303
chr17 38666717 38666725 TBX5 JASPAR yes 21235304
chr17 38666717 38666725 MGA JASPAR yes 54219355
chr17 38666717 38666725 TBX15 JASPAR yes 54219356
chr17 38666717 38666725 TBX1 JASPAR yes 54219357
chr17 38666717 38666725 TBX4 JASPAR yes 54219358
chr17 38666717 38666725 TBX5 JASPAR yes 54219359
chr17 38666723 38666738 RFX5 JASPAR yes 21235305
chr17 38666723 38666738 RFX5 JASPAR yes 54219360
chr17 38666743 38666752 HIC2 JASPAR yes 21235306
chr17 38666743 38666752 HIC2 JASPAR yes 54219361
chr17 38666751 38666757 SOX10 JASPAR yes 21235307
chr17 38666751 38666757 SOX10 JASPAR yes 54219362
chr17 38666772 38666786 TLX1 JASPAR yes 21235308
chr17 38666772 38666786 TLX1 JASPAR yes 54219363
chr17 38666797 38666801 LFA1 TRANSFAC yes 21235309
chr17 38666797 38666801 LFA1 TRANSFAC yes 54219364
chr17 38666807 38666821 MTF1 JASPAR yes 21235310
chr17 38666807 38666821 MTF1 JASPAR yes 54219365
chr17 38666819 38666834 TFAP2C JASPAR yes 21235311
chr17 38666819 38666834 TFAP2C JASPAR yes 54219366
chr17 38666820 38666831 EBF1 JASPAR yes 21235312
chr17 38666820 38666831 EBF1 JASPAR yes 54219367
chr17 38666827 38666837 MAX JASPAR yes 21235313
chr17 38666827 38666837 MAX JASPAR yes 54219368
chr17 38666827 38666838 USF2 JASPAR yes 21235314
chr17 38666827 38666838 USF2 JASPAR yes 54219369
chr17 38666827 38666839 HES5 JASPAR yes 21235315
chr17 38666827 38666839 HES5 JASPAR yes 54219370
chr17 38666828 38666838 CLOCK JASPAR yes 21235316
chr17 38666828 38666838 HEY1 JASPAR yes 21235317
chr17 38666828 38666838 HEY2 JASPAR yes 21235318
chr17 38666828 38666838 MAX JASPAR yes 21235319
chr17 38666828 38666838 MLXIPL JASPAR yes 21235320
chr17 38666828 38666838 MNT JASPAR yes 21235321
chr17 38666828 38666838 TFE3 JASPAR yes 21235322
chr17 38666828 38666838 TFEC JASPAR yes 21235323
chr17 38666828 38666838 CLOCK JASPAR yes 54219371
chr17 38666828 38666838 HEY1 JASPAR yes 54219372
chr17 38666828 38666838 HEY2 JASPAR yes 54219373
chr17 38666828 38666838 MAX JASPAR yes 54219374
chr17 38666828 38666838 MLXIPL JASPAR yes 54219375
chr17 38666828 38666838 MNT JASPAR yes 54219376
chr17 38666828 38666838 TFE3 JASPAR yes 54219377
chr17 38666828 38666838 TFEC JASPAR yes 54219378
chr17 38666829 38666836 USF1 JASPAR yes 21235324
chr17 38666829 38666836 USF1 JASPAR yes 54219379
chr17 38666829 38666839 MAX JASPAR yes 21235325
chr17 38666829 38666839 MAX JASPAR yes 54219380
chr17 38666830 38666835 MYC TRANSFAC yes 21235326
chr17 38666830 38666835 USF1 TRANSFAC yes 21235327
chr17 38666830 38666835 USF2 TRANSFAC yes 21235328
chr17 38666830 38666835 MYC TRANSFAC yes 54219381
chr17 38666830 38666835 USF1 TRANSFAC yes 54219382
chr17 38666830 38666835 USF2 TRANSFAC yes 54219383
chr17 38666837 38666840 MYB TRANSFAC yes 21235329
chr17 38666837 38666840 MYB TRANSFAC yes 54219384
chr17 38666875 38666890 RUNX2 JASPAR yes 21235330
chr17 38666875 38666890 RUNX2 JASPAR yes 54219385
chr17 38666878 38666889 RUNX1 JASPAR yes 21235331
chr17 38666878 38666889 RUNX1 JASPAR yes 54219386
SNP sites on vista24725[chr17:38666550-38666883]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38666762 rs189303249 C T
EP300 FOS FOSL2 MYC NR3C1 TFAP2C
4867653
chr17 38666806 rs141259531 C G,T
EP300 FOS FOSL2 MYC NR3C1 TFAP2C
4867654
chr17 38666832 rs566249591 A G
CLOCK EP300 HES5 HEY1 HEY2 MAX MLXIPL MNT MYC NR3C1 TFAP2C TFE3 TFEC USF1 USF2
4867655
Genes possibly regulated by vista24725[chr17:38666550-38666883]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 7652
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 33152
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 91299
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 45159
Expression level of Genes
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miRNAs possibly regulated by vista24725[chr17:38666550-38666883]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results