EnhancerDB
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  3. vista24727[chr17:38677736-38678132]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24727[chr17:38677736-38678132]
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Tissue distribution of vista24727
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Transcription factor that possibly regulate vista24727[chr17:38677736-38678132]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38677554 38678000 GABPA UCSC Txn Factor no Conserved 108255512
chr17 38677682 38678263 EP300 UCSC Txn Factor no Conserved 108255520
chr17 38677695 38678301 POLR2A UCSC Txn Factor no Conserved 108255523
chr17 38677752 38678215 TCF12 UCSC Txn Factor no Conserved 108255528
chr17 38677755 38678190 NR3C1 UCSC Txn Factor no Conserved 108255530
chr17 38677847 38678182 FOSL2 UCSC Txn Factor no Conserved 108255539
chr17 38677729 38677743 PLAG1 JASPAR yes 21235400
chr17 38677729 38677743 PLAG1 JASPAR yes 54220921
chr17 38677740 38677750 ELK1 JASPAR yes 21235401
chr17 38677740 38677750 ELK1 JASPAR yes 54220922
chr17 38677744 38677750 ETS1 JASPAR yes 21235402
chr17 38677744 38677750 SPI1 JASPAR yes 21235403
chr17 38677744 38677750 ETS1 JASPAR yes 54220923
chr17 38677744 38677750 SPI1 JASPAR yes 54220924
chr17 38677747 38677758 FLI1 JASPAR yes 21235404
chr17 38677747 38677758 FLI1 JASPAR yes 54220925
chr17 38677747 38677762 AR JASPAR yes 21235405
chr17 38677747 38677762 AR JASPAR yes 54220926
chr17 38677748 38677758 GABPA JASPAR yes 21235406
chr17 38677748 38677758 GABPA JASPAR yes 54220927
chr17 38677748 38677759 ELF5 JASPAR yes 21235407
chr17 38677748 38677759 ETV2 JASPAR yes 21235408
chr17 38677748 38677759 ELF5 JASPAR yes 54220928
chr17 38677748 38677759 ETV2 JASPAR yes 54220929
chr17 38677748 38677761 ELF1 JASPAR yes 21235409
chr17 38677748 38677761 ELF1 JASPAR yes 54220930
chr17 38677756 38677767 STAT1 JASPAR yes 21235410
chr17 38677756 38677767 STAT1 JASPAR yes 54220931
chr17 38677763 38677766 MYB TRANSFAC yes 21235411
chr17 38677763 38677766 MYB TRANSFAC yes 54220932
chr17 38677814 38677833 REST JASPAR yes 21235412
chr17 38677814 38677833 REST JASPAR yes 54220933
chr17 38677816 38677828 TFAP2A JASPAR yes 21235413
chr17 38677816 38677828 TFAP2B JASPAR yes 21235414
chr17 38677816 38677828 TFAP2C JASPAR yes 21235415
chr17 38677816 38677828 TFAP2A JASPAR yes 54220934
chr17 38677816 38677828 TFAP2B JASPAR yes 54220935
chr17 38677816 38677828 TFAP2C JASPAR yes 54220936
chr17 38677830 38677840 RELA JASPAR yes 21235416
chr17 38677830 38677840 RELA JASPAR yes 54220937
chr17 38677830 38677841 NFKB1 JASPAR yes 21235417
chr17 38677830 38677841 NFKB1 JASPAR yes 54220938
chr17 38677839 38677859 PPARG JASPAR yes 21235418
chr17 38677839 38677859 PPARG JASPAR yes 54220939
chr17 38677843 38677857 RXRB JASPAR yes 21235419
chr17 38677843 38677857 RXRG JASPAR yes 21235420
chr17 38677843 38677857 RXRB JASPAR yes 54220940
chr17 38677843 38677857 RXRG JASPAR yes 54220941
chr17 38677843 38677858 NR2C2 JASPAR yes 21235421
chr17 38677843 38677858 NR2C2 JASPAR yes 54220942
chr17 38677849 38677864 TFAP2C JASPAR yes 21235422
chr17 38677849 38677864 TFAP2C JASPAR yes 54220943
chr17 38677851 38677865 EBF1 JASPAR yes 21235423
chr17 38677851 38677865 EBF1 JASPAR yes 54220944
chr17 38677852 38677863 EBF1 JASPAR yes 21235424
chr17 38677852 38677863 EBF1 JASPAR yes 54220945
chr17 38677858 38677871 NFKB2 JASPAR yes 21235425
chr17 38677858 38677871 NFKB2 JASPAR yes 54220946
chr17 38677859 38677870 NFKB1 JASPAR yes 21235426
chr17 38677859 38677870 NFKB1 JASPAR yes 54220947
chr17 38677860 38677870 NFKB1 JASPAR yes 21235427
chr17 38677860 38677870 NFKB1 JASPAR yes 54220948
chr17 38677862 38677878 GLIS1 JASPAR yes 21235428
chr17 38677862 38677878 GLIS1 JASPAR yes 54220949
chr17 38677866 38677872 MZF1 JASPAR yes 21235429
chr17 38677866 38677872 MZF1 JASPAR yes 54220950
chr17 38677874 38677879 GATA2 JASPAR yes 21235430
chr17 38677874 38677879 GATA2 JASPAR yes 54220951
chr17 38677876 38677890 ZIC1 JASPAR yes 21235431
chr17 38677876 38677890 ZIC1 JASPAR yes 54220952
chr17 38677876 38677891 ZIC3 JASPAR yes 21235432
chr17 38677876 38677891 ZIC4 JASPAR yes 21235433
chr17 38677876 38677891 ZIC3 JASPAR yes 54220953
chr17 38677876 38677891 ZIC4 JASPAR yes 54220954
chr17 38677883 38677897 GLIS3 JASPAR yes 21235434
chr17 38677883 38677897 GLIS3 JASPAR yes 54220955
chr17 38677893 38677904 ESRRA JASPAR yes 21235435
chr17 38677893 38677904 ESRRA JASPAR yes 54220956
chr17 38677917 38677923 NFE2 TRANSFAC yes 21235436
chr17 38677917 38677923 NFE2 TRANSFAC yes 54220957
chr17 38677942 38677952 NFKB1 JASPAR yes 21235437
chr17 38677942 38677952 NFKB1 JASPAR yes 54220958
chr17 38677942 38677953 NFKB1 JASPAR yes 21235438
chr17 38677942 38677953 NFKB1 JASPAR yes 54220959
chr17 38677961 38677980 PAX5 JASPAR yes 21235439
chr17 38677961 38677980 PAX5 JASPAR yes 54220960
chr17 38677963 38677970 SPI1 JASPAR yes 21235440
chr17 38677963 38677970 SPI1 JASPAR yes 54220961
chr17 38677964 38677981 PAX1 JASPAR yes 21235441
chr17 38677964 38677981 PAX9 JASPAR yes 21235442
chr17 38677964 38677981 PAX1 JASPAR yes 54220962
chr17 38677964 38677981 PAX9 JASPAR yes 54220963
chr17 38677997 38678001 ESR1 TRANSFAC yes 21235443
chr17 38677997 38678001 ESR1 TRANSFAC yes 54220964
chr17 38677999 38678017 ESR1 JASPAR yes 21235444
chr17 38677999 38678017 ESR1 JASPAR yes 54220965
chr17 38678001 38678016 ESR2 JASPAR yes 21235445
chr17 38678001 38678016 ESR2 JASPAR yes 54220966
chr17 38678002 38678006 ESR1 TRANSFAC yes 21235446
chr17 38678002 38678006 ESR1 TRANSFAC yes 54220967
chr17 38678005 38678015 GCM2 JASPAR yes 21235447
chr17 38678005 38678015 GCM2 JASPAR yes 54220968
chr17 38678005 38678017 INSM1 JASPAR yes 21235448
chr17 38678005 38678017 INSM1 JASPAR yes 54220969
chr17 38678006 38678026 RREB1 JASPAR yes 21235449
chr17 38678006 38678026 RREB1 JASPAR yes 54220970
chr17 38678008 38678018 SP1 JASPAR yes 21235450
chr17 38678008 38678018 SP1 JASPAR yes 54220971
chr17 38678013 38678019 MZF1 JASPAR yes 21235451
chr17 38678013 38678019 MZF1 JASPAR yes 54220972
chr17 38678014 38678028 PLAG1 JASPAR yes 21235452
chr17 38678014 38678028 PLAG1 JASPAR yes 54220973
chr17 38678030 38678042 FOXI1 JASPAR yes 21235453
chr17 38678030 38678042 FOXI1 JASPAR yes 54220974
chr17 38678034 38678040 HiNF-A TRANSFAC yes 21235454
chr17 38678034 38678040 HiNF-A TRANSFAC yes 54220975
chr17 38678045 38678050 GATA2 JASPAR yes 21235455
chr17 38678045 38678050 GATA2 JASPAR yes 54220976
chr17 38678056 38678061 MYB TRANSFAC yes 21235456
chr17 38678056 38678061 MYB TRANSFAC yes 54220977
chr17 38678075 38678091 SOX8 JASPAR yes 21235457
chr17 38678075 38678091 SOX8 JASPAR yes 54220978
chr17 38678087 38678104 BCL6B JASPAR yes 21235458
chr17 38678087 38678104 BCL6B JASPAR yes 54220979
chr17 38678090 38678106 ZNF143 JASPAR yes 21235459
chr17 38678090 38678106 ZNF143 JASPAR yes 54220980
chr17 38678095 38678101 SOX10 JASPAR yes 21235460
chr17 38678095 38678101 SOX10 JASPAR yes 54220981
chr17 38678115 38678126 FOS JASPAR yes 21235461
chr17 38678115 38678126 FOSL1 JASPAR yes 21235462
chr17 38678115 38678126 JUND JASPAR yes 21235463
chr17 38678115 38678126 FOS JASPAR yes 54220982
chr17 38678115 38678126 FOSL1 JASPAR yes 54220983
chr17 38678115 38678126 JUND JASPAR yes 54220984
chr17 38678116 38678127 FOSL2 JASPAR yes 21235464
chr17 38678116 38678127 JUNB JASPAR yes 21235465
chr17 38678116 38678127 FOSL2 JASPAR yes 54220985
chr17 38678116 38678127 JUNB JASPAR yes 54220986
chr17 38678116 38678130 JUN JASPAR yes 21235466
chr17 38678116 38678130 JUN JASPAR yes 54220987
chr17 38678120 38678130 SREBF1 JASPAR yes 21235467
chr17 38678120 38678130 SREBF1 JASPAR yes 54220988
SNP sites on vista24727[chr17:38677736-38678132]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38678028 rs73983072 C A
EP300 FOSL2 NR3C1 PLAG1 POLR2A TCF12
4867838
chr17 38678043 rs73310959 A G
EP300 FOSL2 NR3C1 POLR2A TCF12
4867839
chr17 38678059 rs555979151 T C
EP300 FOSL2 MYB NR3C1 POLR2A TCF12
4867840
chr17 38678106 rs8077724 C T
EP300 FOSL2 NR3C1 POLR2A TCF12 ZNF143
4867841
Genes possibly regulated by vista24727[chr17:38677736-38678132]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 21966
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 80113
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 56408
Expression level of Genes
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miRNAs possibly regulated by vista24727[chr17:38677736-38678132]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results