EnhancerDB
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  3. vista24730[chr17:38689625-38689996]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24730[chr17:38689625-38689996]
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Tissue distribution of vista24730
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Transcription factor that possibly regulate vista24730[chr17:38689625-38689996]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38689551 38690162 CTCF UCSC Txn Factor no Conserved 108255581
chr17 38689599 38689895 SMC3 UCSC Txn Factor no Conserved 108255592
chr17 38689602 38690012 EP300 UCSC Txn Factor no Conserved 108255593
chr17 38689603 38689872 RAD21 UCSC Txn Factor no Conserved 108255595
chr17 38689616 38690018 TCF12 UCSC Txn Factor no Conserved 108255607
chr17 38689624 38689634 RELA JASPAR yes 21235519
chr17 38689624 38689634 RELA JASPAR yes 54222675
chr17 38689632 38689639 USF1 JASPAR yes 21235520
chr17 38689632 38689639 USF1 JASPAR yes 54222676
chr17 38689633 38689638 MYC TRANSFAC yes 21235521
chr17 38689633 38689638 USF1 TRANSFAC yes 21235522
chr17 38689633 38689638 USF2 TRANSFAC yes 21235523
chr17 38689633 38689638 MYC TRANSFAC yes 54222677
chr17 38689633 38689638 USF1 TRANSFAC yes 54222678
chr17 38689633 38689638 USF2 TRANSFAC yes 54222679
chr17 38689727 38689731 H4TF2 TRANSFAC yes 21235524
chr17 38689727 38689731 H4TF2 TRANSFAC yes 54222680
chr17 38689734 38689753 CTCF JASPAR yes 21235525
chr17 38689734 38689753 CTCF JASPAR yes 54222681
chr17 38689749 38689759 MSC JASPAR yes 21235526
chr17 38689749 38689759 MSC JASPAR yes 54222682
chr17 38689757 38689778 IRF1 JASPAR yes 21235527
chr17 38689757 38689778 IRF1 JASPAR yes 54222683
chr17 38689759 38689774 PRDM1 JASPAR yes 21235528
chr17 38689759 38689774 PRDM1 JASPAR yes 54222684
chr17 38689781 38689788 SPIB JASPAR yes 21235529
chr17 38689781 38689788 SPIB JASPAR yes 54222685
chr17 38689791 38689811 RREB1 JASPAR yes 21235530
chr17 38689791 38689811 RREB1 JASPAR yes 54222686
chr17 38689793 38689813 RREB1 JASPAR yes 21235531
chr17 38689793 38689813 RREB1 JASPAR yes 54222687
chr17 38689795 38689815 RREB1 JASPAR yes 21235532
chr17 38689795 38689815 RREB1 JASPAR yes 54222688
chr17 38689797 38689817 RREB1 JASPAR yes 21235533
chr17 38689797 38689817 RREB1 JASPAR yes 54222689
chr17 38689799 38689819 RREB1 JASPAR yes 21235534
chr17 38689799 38689819 RREB1 JASPAR yes 54222690
chr17 38689801 38689821 RREB1 JASPAR yes 21235535
chr17 38689801 38689821 RREB1 JASPAR yes 54222691
chr17 38689803 38689823 RREB1 JASPAR yes 21235536
chr17 38689803 38689823 RREB1 JASPAR yes 54222692
chr17 38689805 38689825 RREB1 JASPAR yes 21235537
chr17 38689805 38689825 RREB1 JASPAR yes 54222693
chr17 38689807 38689827 RREB1 JASPAR yes 21235538
chr17 38689807 38689827 RREB1 JASPAR yes 54222694
chr17 38689809 38689829 RREB1 JASPAR yes 21235539
chr17 38689809 38689829 RREB1 JASPAR yes 54222695
chr17 38689811 38689831 RREB1 JASPAR yes 21235540
chr17 38689811 38689831 RREB1 JASPAR yes 54222696
chr17 38689813 38689833 RREB1 JASPAR yes 21235541
chr17 38689813 38689833 RREB1 JASPAR yes 54222697
chr17 38689815 38689835 RREB1 JASPAR yes 21235542
chr17 38689815 38689835 RREB1 JASPAR yes 54222698
chr17 38689817 38689837 RREB1 JASPAR yes 21235543
chr17 38689817 38689837 RREB1 JASPAR yes 54222699
chr17 38689819 38689839 RREB1 JASPAR yes 21235544
chr17 38689819 38689839 RREB1 JASPAR yes 54222700
chr17 38689821 38689841 RREB1 JASPAR yes 21235545
chr17 38689821 38689841 RREB1 JASPAR yes 54222701
chr17 38689829 38689849 RREB1 JASPAR yes 21235546
chr17 38689829 38689849 RREB1 JASPAR yes 54222702
chr17 38689844 38689865 ZNF263 JASPAR yes 21235547
chr17 38689844 38689865 ZNF263 JASPAR yes 54222703
chr17 38689847 38689852 SP1 TRANSFAC yes 21235548
chr17 38689847 38689852 SP1 TRANSFAC yes 54222704
chr17 38689847 38689868 ZNF263 JASPAR yes 21235549
chr17 38689847 38689868 ZNF263 JASPAR yes 54222705
chr17 38689849 38689854 TFAP2A TRANSFAC yes 21235550
chr17 38689849 38689854 TFAP2A TRANSFAC yes 54222706
chr17 38689849 38689855 MZF1 JASPAR yes 21235551
chr17 38689849 38689855 MZF1 JASPAR yes 54222707
chr17 38689849 38689870 ZNF263 JASPAR yes 21235552
chr17 38689849 38689870 ZNF263 JASPAR yes 54222708
chr17 38689850 38689871 ZNF263 JASPAR yes 21235553
chr17 38689850 38689871 ZNF263 JASPAR yes 54222709
chr17 38689851 38689856 ETS2 TRANSFAC yes 21235554
chr17 38689851 38689856 ETS2 TRANSFAC yes 54222710
chr17 38689856 38689874 ESR1 JASPAR yes 21235555
chr17 38689856 38689874 ESR1 JASPAR yes 54222711
chr17 38689859 38689864 SP1 TRANSFAC yes 21235556
chr17 38689859 38689864 SP1 TRANSFAC yes 54222712
chr17 38689860 38689870 ZNF740 JASPAR yes 21235557
chr17 38689860 38689870 ZNF740 JASPAR yes 54222713
chr17 38689869 38689881 YY1 JASPAR yes 21235558
chr17 38689869 38689881 YY1 JASPAR yes 54222714
chr17 38689872 38689887 FOXA1 JASPAR yes 21235559
chr17 38689872 38689887 FOXA1 JASPAR yes 54222715
chr17 38689876 38689887 FOXA1 JASPAR yes 21235560
chr17 38689876 38689887 FOXA1 JASPAR yes 54222716
chr17 38689886 38689900 SPIC JASPAR yes 21235561
chr17 38689886 38689900 SPIC JASPAR yes 54222717
chr17 38689887 38689900 ELF1 JASPAR yes 21235562
chr17 38689887 38689900 ELF1 JASPAR yes 54222718
chr17 38689888 38689900 EHF JASPAR yes 21235563
chr17 38689888 38689900 ELF1 JASPAR yes 21235564
chr17 38689888 38689900 ELF4 JASPAR yes 21235565
chr17 38689888 38689900 EHF JASPAR yes 54222719
chr17 38689888 38689900 ELF1 JASPAR yes 54222720
chr17 38689888 38689900 ELF4 JASPAR yes 54222721
chr17 38689888 38689901 ELF3 JASPAR yes 21235566
chr17 38689888 38689901 ELF3 JASPAR yes 54222722
chr17 38689889 38689900 ELF5 JASPAR yes 21235567
chr17 38689889 38689900 ETV2 JASPAR yes 21235568
chr17 38689889 38689900 ELF5 JASPAR yes 54222723
chr17 38689889 38689900 ETV2 JASPAR yes 54222724
chr17 38689890 38689900 ERF JASPAR yes 21235569
chr17 38689890 38689900 ERG JASPAR yes 21235570
chr17 38689890 38689900 ETS1 JASPAR yes 21235571
chr17 38689890 38689900 FEV JASPAR yes 21235572
chr17 38689890 38689900 FLI1 JASPAR yes 21235573
chr17 38689890 38689900 ERF JASPAR yes 54222725
chr17 38689890 38689900 ERG JASPAR yes 54222726
chr17 38689890 38689900 ETS1 JASPAR yes 54222727
chr17 38689890 38689900 FEV JASPAR yes 54222728
chr17 38689890 38689900 FLI1 JASPAR yes 54222729
chr17 38689890 38689901 FLI1 JASPAR yes 21235574
chr17 38689890 38689901 FLI1 JASPAR yes 54222730
chr17 38689891 38689899 FEV JASPAR yes 21235575
chr17 38689891 38689899 FEV JASPAR yes 54222731
chr17 38689896 38689910 XBP1 JASPAR yes 21235576
chr17 38689896 38689910 XBP1 JASPAR yes 54222732
chr17 38689902 38689907 ATF1 TRANSFAC yes 21235577
chr17 38689902 38689907 ATF1 TRANSFAC yes 54222733
chr17 38689927 38689935 EHF JASPAR yes 21235578
chr17 38689927 38689935 EHF JASPAR yes 54222734
chr17 38689957 38689968 NFIL3 JASPAR yes 21235579
chr17 38689957 38689968 NFIL3 JASPAR yes 54222735
chr17 38689958 38689970 HLF JASPAR yes 21235580
chr17 38689958 38689970 HLF JASPAR yes 54222736
chr17 38689959 38689973 FOXF2 JASPAR yes 21235581
chr17 38689959 38689973 FOXF2 JASPAR yes 54222737
chr17 38689961 38689972 FOXC1 JASPAR yes 21235582
chr17 38689961 38689972 FOXC1 JASPAR yes 54222738
chr17 38689961 38689973 FOXC2 JASPAR yes 21235583
chr17 38689961 38689973 FOXC2 JASPAR yes 54222739
chr17 38689964 38689972 FOXG1 JASPAR yes 21235584
chr17 38689964 38689972 FOXG1 JASPAR yes 54222740
chr17 38689996 38690005 SNAI2 JASPAR yes 21235585
chr17 38689996 38690005 SNAI2 JASPAR yes 54222741
chr17 38689996 38690006 ID4 JASPAR yes 21235586
chr17 38689996 38690006 TCF3 JASPAR yes 21235587
chr17 38689996 38690006 TCF4 JASPAR yes 21235588
chr17 38689996 38690006 ID4 JASPAR yes 54222742
chr17 38689996 38690006 TCF3 JASPAR yes 54222743
chr17 38689996 38690006 TCF4 JASPAR yes 54222744
SNP sites on vista24730[chr17:38689625-38689996]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38689654 rs73983080 T G
CTCF EP300 RAD21 SMC3 TCF12
4867961
chr17 38689691 rs142178219 CAAG C
CTCF EP300 RAD21 SMC3 TCF12
4867962
chr17 38689691 rs796515142 CAAG C
CTCF EP300 RAD21 SMC3 TCF12
4867963
chr17 38689817 rs144075212 G A
CTCF EP300 RAD21 RREB1 SMC3 TCF12
4867964
chr17 38689858 rs73983081 A G
CTCF EP300 ESR1 RAD21 SMC3 TCF12 ZNF263
4867965
chr17 38689904 rs75890617 C T
ATF1 CTCF EP300 TCF12 XBP1
4867966
Genes possibly regulated by vista24730[chr17:38689625-38689996]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 10077
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 68224
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 68272
Expression level of Genes
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miRNAs possibly regulated by vista24730[chr17:38689625-38689996]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results