EnhancerDB
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  3. vista24742[chr17:38734014-38734293]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24742[chr17:38734014-38734293]
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Tissue distribution of vista24742
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Transcription factor that possibly regulate vista24742[chr17:38734014-38734293]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38733752 38734206 EBF1 UCSC Txn Factor no Conserved 108257004
chr17 38733922 38734292 NFIC UCSC Txn Factor no Conserved 108257041
chr17 38733984 38734336 RUNX3 UCSC Txn Factor no Conserved 108257059
chr17 38734040 38734051 EBF1 JASPAR yes 21236450
chr17 38734040 38734051 EBF1 JASPAR yes 54227411
chr17 38734050 38734071 IRF1 JASPAR yes 21236451
chr17 38734050 38734071 IRF1 JASPAR yes 54227412
chr17 38734052 38734067 STAT2 JASPAR yes 21236452
chr17 38734052 38734067 STAT2 JASPAR yes 54227413
chr17 38734053 38734067 STAT1 JASPAR yes 21236453
chr17 38734053 38734067 STAT1 JASPAR yes 54227414
chr17 38734054 38734066 IRF1 JASPAR yes 21236454
chr17 38734054 38734066 IRF1 JASPAR yes 54227415
chr17 38734054 38734068 IRF7 JASPAR yes 21236455
chr17 38734054 38734068 IRF8 JASPAR yes 21236456
chr17 38734054 38734068 IRF7 JASPAR yes 54227416
chr17 38734054 38734068 IRF8 JASPAR yes 54227417
chr17 38734054 38734069 IRF9 JASPAR yes 21236457
chr17 38734054 38734069 IRF9 JASPAR yes 54227418
chr17 38734082 38734092 SREBF1 JASPAR yes 21236458
chr17 38734082 38734092 SREBF2 JASPAR yes 21236459
chr17 38734082 38734092 SREBF1 JASPAR yes 54227419
chr17 38734082 38734092 SREBF2 JASPAR yes 54227420
chr17 38734088 38734098 MZF1 JASPAR yes 21236460
chr17 38734088 38734098 MZF1 JASPAR yes 54227421
chr17 38734091 38734096 TFAP2A TRANSFAC yes 21236461
chr17 38734091 38734096 TFAP2A TRANSFAC yes 54227422
chr17 38734091 38734097 MZF1 JASPAR yes 21236462
chr17 38734091 38734097 MZF1 JASPAR yes 54227423
chr17 38734091 38734104 NFKB1 JASPAR yes 21236463
chr17 38734091 38734104 NFKB2 JASPAR yes 21236464
chr17 38734091 38734104 NFKB1 JASPAR yes 54227424
chr17 38734091 38734104 NFKB2 JASPAR yes 54227425
chr17 38734092 38734102 NFKB1 JASPAR yes 21236465
chr17 38734092 38734102 RELA JASPAR yes 21236466
chr17 38734092 38734102 NFKB1 JASPAR yes 54227426
chr17 38734092 38734102 RELA JASPAR yes 54227427
chr17 38734092 38734103 NFKB1 JASPAR yes 21236467
chr17 38734092 38734103 NFKB1 JASPAR yes 54227428
chr17 38734105 38734109 YY1 TRANSFAC yes 21236468
chr17 38734105 38734109 YY1 TRANSFAC yes 54227429
chr17 38734184 38734205 ZNF263 JASPAR yes 21236469
chr17 38734184 38734205 ZNF263 JASPAR yes 54227430
chr17 38734186 38734197 E2F6 JASPAR yes 21236470
chr17 38734186 38734197 E2F6 JASPAR yes 54227431
chr17 38734188 38734209 ZNF263 JASPAR yes 21236471
chr17 38734188 38734209 ZNF263 JASPAR yes 54227432
chr17 38734201 38734212 NFKB1 JASPAR yes 21236472
chr17 38734201 38734212 NFKB1 JASPAR yes 54227433
chr17 38734206 38734224 IRF2 JASPAR yes 21236473
chr17 38734206 38734224 IRF2 JASPAR yes 54227434
chr17 38734209 38734224 STAT2 JASPAR yes 21236474
chr17 38734209 38734224 STAT2 JASPAR yes 54227435
chr17 38734210 38734224 STAT1 JASPAR yes 21236475
chr17 38734210 38734224 STAT1 JASPAR yes 54227436
chr17 38734211 38734225 IRF8 JASPAR yes 21236476
chr17 38734211 38734225 IRF8 JASPAR yes 54227437
chr17 38734211 38734226 IRF9 JASPAR yes 21236477
chr17 38734211 38734226 IRF9 JASPAR yes 54227438
chr17 38734221 38734242 ZNF263 JASPAR yes 21236478
chr17 38734221 38734242 ZNF263 JASPAR yes 54227439
chr17 38734264 38734275 RUNX1 JASPAR yes 21236479
chr17 38734264 38734275 RUNX1 JASPAR yes 54227440
chr17 38734274 38734289 HNF4A JASPAR yes 21236480
chr17 38734274 38734289 HNF4A JASPAR yes 54227441
chr17 38734275 38734289 RXRB JASPAR yes 21236481
chr17 38734275 38734289 RXRG JASPAR yes 21236482
chr17 38734275 38734289 RXRB JASPAR yes 54227442
chr17 38734275 38734289 RXRG JASPAR yes 54227443
chr17 38734275 38734290 HNF4G JASPAR yes 21236483
chr17 38734275 38734290 HNF4G JASPAR yes 54227444
chr17 38734293 38734302 NKX3-2 JASPAR yes 21236484
chr17 38734293 38734302 NKX3-2 JASPAR yes 54227445
chr17 38734293 38734303 NKX2-3 JASPAR yes 21236485
chr17 38734293 38734303 NKX2-3 JASPAR yes 54227446
SNP sites on vista24742[chr17:38734014-38734293]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38734162 rs16965957 C T
EBF1 NFIC RUNX3
4868455
chr17 38734224 rs115332657 C T
IRF2 IRF8 IRF9 NFIC RUNX3 STAT1 STAT2 ZNF263
4868456
chr17 38734265 rs118179127 A G
NFIC RUNX1 RUNX3
4868457
Genes possibly regulated by vista24742[chr17:38734014-38734293]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 23835
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 87710
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 29533
chr17 38785049 38821393 - KRT222 ENSG00000264058.1 38821393 0.92 1.0 15772 12900
chr17 38810917 38821433 - KRT222 ENSG00000213424.4 38821433 0.82 0.98 15773 12860
Expression level of Genes
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miRNAs possibly regulated by vista24742[chr17:38734014-38734293]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results