EnhancerDB
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  3. vista24745[chr17:38754802-38755132]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24745[chr17:38754802-38755132]
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Tissue distribution of vista24745
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Transcription factor that possibly regulate vista24745[chr17:38754802-38755132]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38754852 38755767 NFIC UCSC Txn Factor no Conserved 108257399
chr17 38754852 38755767 NFIC UCSC Txn Factor no Conserved 108257400
chr17 38754857 38755153 BHLHE40 UCSC Txn Factor no Conserved 108257403
chr17 38754880 38755141 EBF1 UCSC Txn Factor no Conserved 108257407
chr17 38754897 38755712 RUNX3 UCSC Txn Factor no Conserved 108257412
chr17 38754897 38755712 RUNX3 UCSC Txn Factor no Conserved 108257413
chr17 38754907 38755707 MTA3 UCSC Txn Factor no Conserved 108257417
chr17 38754907 38755707 MTA3 UCSC Txn Factor no Conserved 108257418
chr17 38754915 38755714 ATF2 UCSC Txn Factor no Conserved 108257422
chr17 38754915 38755714 ATF2 UCSC Txn Factor no Conserved 108257423
chr17 38754935 38755137 EGR1 UCSC Txn Factor no Conserved 108257427
chr17 38754953 38755190 BATF UCSC Txn Factor no Conserved 108257432
chr17 38754807 38754821 PLAG1 JASPAR yes 21236567
chr17 38754807 38754821 PLAG1 JASPAR yes 54230126
chr17 38754828 38754835 NKX3-1 JASPAR yes 21236568
chr17 38754828 38754835 NKX3-1 JASPAR yes 54230127
chr17 38754864 38754876 E2F8 JASPAR yes 21236569
chr17 38754864 38754876 E2F8 JASPAR yes 54230128
chr17 38754866 38754871 TFAP2A TRANSFAC yes 21236570
chr17 38754866 38754871 TFAP2A TRANSFAC yes 54230129
chr17 38754866 38754872 MZF1 JASPAR yes 21236571
chr17 38754866 38754872 MZF1 JASPAR yes 54230130
chr17 38754866 38754887 IRF1 JASPAR yes 21236572
chr17 38754866 38754887 IRF1 JASPAR yes 54230131
chr17 38754870 38754884 STAT1 JASPAR yes 21236573
chr17 38754870 38754884 STAT1 JASPAR yes 54230132
chr17 38754870 38754885 STAT2 JASPAR yes 21236574
chr17 38754870 38754885 STAT2 JASPAR yes 54230133
chr17 38754870 38754888 IRF2 JASPAR yes 21236575
chr17 38754870 38754888 IRF2 JASPAR yes 54230134
chr17 38754871 38754883 IRF1 JASPAR yes 21236576
chr17 38754871 38754883 IRF1 JASPAR yes 54230135
chr17 38754874 38754894 RREB1 JASPAR yes 21236577
chr17 38754874 38754894 RREB1 JASPAR yes 54230136
chr17 38754876 38754888 IRF1 JASPAR yes 21236578
chr17 38754876 38754888 IRF1 JASPAR yes 54230137
chr17 38754880 38754897 ZNF410 JASPAR yes 21236579
chr17 38754880 38754897 ZNF410 JASPAR yes 54230138
chr17 38754883 38754894 CDX2 JASPAR yes 21236580
chr17 38754883 38754894 RUNX1 JASPAR yes 21236581
chr17 38754883 38754894 CDX2 JASPAR yes 54230139
chr17 38754883 38754894 RUNX1 JASPAR yes 54230140
chr17 38754892 38754900 FEV JASPAR yes 21236582
chr17 38754892 38754900 FEV JASPAR yes 54230141
chr17 38754893 38754908 HSF1 JASPAR yes 21236583
chr17 38754893 38754908 HSF1 JASPAR yes 54230142
chr17 38754894 38754907 HSF1 JASPAR yes 21236584
chr17 38754894 38754907 HSF2 JASPAR yes 21236585
chr17 38754894 38754907 HSF4 JASPAR yes 21236586
chr17 38754894 38754907 HSF1 JASPAR yes 54230143
chr17 38754894 38754907 HSF2 JASPAR yes 54230144
chr17 38754894 38754907 HSF4 JASPAR yes 54230145
chr17 38754922 38754928 TCF4 TRANSFAC yes 21236587
chr17 38754922 38754928 TCF4 TRANSFAC yes 54230146
chr17 38754939 38754954 HNF4G JASPAR yes 21236588
chr17 38754939 38754954 HNF4G JASPAR yes 54230147
chr17 38754940 38754954 RXRB JASPAR yes 21236589
chr17 38754940 38754954 RXRB JASPAR yes 54230148
chr17 38754940 38754955 HNF4A JASPAR yes 21236590
chr17 38754940 38754955 HNF4A JASPAR yes 54230149
chr17 38754942 38754946 LFA1 TRANSFAC yes 21236591
chr17 38754942 38754946 LFA1 TRANSFAC yes 54230150
chr17 38754957 38754967 SP1 JASPAR yes 21236592
chr17 38754957 38754967 SP1 JASPAR yes 54230151
chr17 38754964 38754981 RXRA JASPAR yes 21236593
chr17 38754964 38754981 RXRA JASPAR yes 54230152
chr17 38754965 38754969 LFA1 TRANSFAC yes 21236594
chr17 38754965 38754969 LFA1 TRANSFAC yes 54230153
chr17 38754965 38754980 PRDM1 JASPAR yes 21236595
chr17 38754965 38754980 PRDM1 JASPAR yes 54230154
chr17 38754974 38754985 FOXA1 JASPAR yes 21236596
chr17 38754974 38754985 FOXA1 JASPAR yes 54230155
chr17 38754974 38754989 FOXA1 JASPAR yes 21236597
chr17 38754974 38754989 FOXA1 JASPAR yes 54230156
chr17 38754980 38754986 HiNF-A TRANSFAC yes 21236598
chr17 38754980 38754986 HiNF-A TRANSFAC yes 54230157
chr17 38754980 38754990 MAX JASPAR yes 21236599
chr17 38754980 38754990 MAX JASPAR yes 54230158
chr17 38754997 38755007 MAX JASPAR yes 21236600
chr17 38754997 38755007 MAX JASPAR yes 54230159
chr17 38754997 38755008 USF2 JASPAR yes 21236601
chr17 38754997 38755008 USF2 JASPAR yes 54230160
chr17 38754997 38755009 HES7 JASPAR yes 21236602
chr17 38754997 38755009 HES7 JASPAR yes 54230161
chr17 38754998 38755008 BHLHE40 JASPAR yes 21236603
chr17 38754998 38755008 BHLHE41 JASPAR yes 21236604
chr17 38754998 38755008 MAX JASPAR yes 21236605
chr17 38754998 38755008 MLXIPL JASPAR yes 21236606
chr17 38754998 38755008 MLX JASPAR yes 21236607
chr17 38754998 38755008 MNT JASPAR yes 21236608
chr17 38754998 38755008 SREBF2 JASPAR yes 21236609
chr17 38754998 38755008 TFE3 JASPAR yes 21236610
chr17 38754998 38755008 TFEB JASPAR yes 21236611
chr17 38754998 38755008 TFEC JASPAR yes 21236612
chr17 38754998 38755008 BHLHE40 JASPAR yes 54230162
chr17 38754998 38755008 BHLHE41 JASPAR yes 54230163
chr17 38754998 38755008 MAX JASPAR yes 54230164
chr17 38754998 38755008 MLXIPL JASPAR yes 54230165
chr17 38754998 38755008 MLX JASPAR yes 54230166
chr17 38754998 38755008 MNT JASPAR yes 54230167
chr17 38754998 38755008 SREBF2 JASPAR yes 54230168
chr17 38754998 38755008 TFE3 JASPAR yes 54230169
chr17 38754998 38755008 TFEB JASPAR yes 54230170
chr17 38754998 38755008 TFEC JASPAR yes 54230171
chr17 38754998 38755009 USF1 JASPAR yes 21236613
chr17 38754998 38755009 USF2 JASPAR yes 21236614
chr17 38754998 38755009 USF1 JASPAR yes 54230172
chr17 38754998 38755009 USF2 JASPAR yes 54230173
chr17 38754999 38755009 MAX JASPAR yes 21236615
chr17 38754999 38755009 MAX JASPAR yes 54230174
chr17 38755000 38755005 MYC TRANSFAC yes 21236616
chr17 38755000 38755005 USF1 TRANSFAC yes 21236617
chr17 38755000 38755005 USF2 TRANSFAC yes 21236618
chr17 38755000 38755005 MYC TRANSFAC yes 54230175
chr17 38755000 38755005 USF1 TRANSFAC yes 54230176
chr17 38755000 38755005 USF2 TRANSFAC yes 54230177
chr17 38755008 38755029 MAFG JASPAR yes 21236619
chr17 38755008 38755029 MAFG JASPAR yes 54230178
chr17 38755033 38755038 SP1 TRANSFAC yes 21236620
chr17 38755033 38755038 SP1 TRANSFAC yes 54230179
chr17 38755038 38755050 HINFP JASPAR yes 21236621
chr17 38755038 38755050 HINFP JASPAR yes 54230180
chr17 38755040 38755050 HINFP JASPAR yes 21236622
chr17 38755040 38755050 HINFP JASPAR yes 54230181
chr17 38755049 38755054 SP1 TRANSFAC yes 21236623
chr17 38755049 38755054 SP1 TRANSFAC yes 54230182
chr17 38755075 38755087 IRF1 JASPAR yes 21236624
chr17 38755075 38755087 IRF1 JASPAR yes 54230183
chr17 38755075 38755089 IRF7 JASPAR yes 21236625
chr17 38755075 38755089 IRF7 JASPAR yes 54230184
chr17 38755086 38755093 JUN TRANSFAC yes 21236626
chr17 38755086 38755093 JUN TRANSFAC yes 54230185
chr17 38755086 38755097 BATF JASPAR yes 21236627
chr17 38755086 38755097 BATF JASPAR yes 54230186
chr17 38755103 38755117 RORA JASPAR yes 21236628
chr17 38755103 38755117 RORA JASPAR yes 54230187
chr17 38755111 38755115 H4TF2 TRANSFAC yes 21236629
chr17 38755111 38755115 H4TF2 TRANSFAC yes 54230188
chr17 38755117 38755126 NKX3-2 JASPAR yes 21236630
chr17 38755117 38755126 NKX3-2 JASPAR yes 54230189
SNP sites on vista24745[chr17:38754802-38755132]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38754859 rs138467188 C T
BHLHE40 NFIC
4868659
chr17 38755021 rs9893132 A G
ATF2 BATF BHLHE40 EBF1 EGR1 MAFG MTA3 NFIC RUNX3
4868660
Genes possibly regulated by vista24745[chr17:38754802-38755132]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 3047
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 66922
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 50372
chr17 38785049 38821393 - KRT222 ENSG00000264058.1 38821393 0.92 1.0 15772 33739
chr17 38810917 38821433 - KRT222 ENSG00000213424.4 38821433 0.82 0.98 15773 33699
Expression level of Genes
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miRNAs possibly regulated by vista24745[chr17:38754802-38755132]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results