EnhancerDB
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  3. vista24746[chr17:38755372-38755931]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24746[chr17:38755372-38755931]
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Tissue distribution of vista24746
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Transcription factor that possibly regulate vista24746[chr17:38755372-38755931]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38754852 38755767 NFIC UCSC Txn Factor no Conserved 108257399
chr17 38754852 38755767 NFIC UCSC Txn Factor no Conserved 108257400
chr17 38754897 38755712 RUNX3 UCSC Txn Factor no Conserved 108257412
chr17 38754897 38755712 RUNX3 UCSC Txn Factor no Conserved 108257413
chr17 38754907 38755707 MTA3 UCSC Txn Factor no Conserved 108257417
chr17 38754907 38755707 MTA3 UCSC Txn Factor no Conserved 108257418
chr17 38754915 38755714 ATF2 UCSC Txn Factor no Conserved 108257422
chr17 38754915 38755714 ATF2 UCSC Txn Factor no Conserved 108257423
chr17 38755163 38755690 FOXM1 UCSC Txn Factor no Conserved 108257459
chr17 38755207 38755665 STAT5A UCSC Txn Factor no Conserved 108257462
chr17 38755209 38755619 TBL1XR1 UCSC Txn Factor no Conserved 108257465
chr17 38755213 38755586 MEF2A UCSC Txn Factor no Conserved 108257467
chr17 38755216 38755574 MEF2C UCSC Txn Factor no Conserved 108257469
chr17 38755238 38755628 PAX5 UCSC Txn Factor no Conserved 108257471
chr17 38755244 38755660 NFATC1 UCSC Txn Factor no Conserved 108257474
chr17 38755301 38755566 SPI1 UCSC Txn Factor no Conserved 108257476
chr17 38755319 38755792 EBF1 UCSC Txn Factor no Conserved 108257480
chr17 38755350 38755740 EP300 UCSC Txn Factor no Conserved 108257486
chr17 38755351 38755622 BATF UCSC Txn Factor no Conserved 108257487
chr17 38755369 38755384 MEF2C JASPAR yes 21236631
chr17 38755369 38755384 MEF2C JASPAR yes 54230230
chr17 38755370 38755385 MEF2A JASPAR yes 21236632
chr17 38755370 38755385 MEF2A JASPAR yes 54230231
chr17 38755371 38755383 MEF2A JASPAR yes 21236633
chr17 38755371 38755383 MEF2B JASPAR yes 21236634
chr17 38755371 38755383 MEF2D JASPAR yes 21236635
chr17 38755371 38755383 MEF2A JASPAR yes 54230232
chr17 38755371 38755383 MEF2B JASPAR yes 54230233
chr17 38755371 38755383 MEF2D JASPAR yes 54230234
chr17 38755372 38755382 MEF2A JASPAR yes 21236636
chr17 38755372 38755382 MEF2A JASPAR yes 54230235
chr17 38755393 38755398 SP1 TRANSFAC yes 21236637
chr17 38755393 38755398 SP1 TRANSFAC yes 54230236
chr17 38755417 38755428 FOXA1 JASPAR yes 21236638
chr17 38755417 38755428 FOXA1 JASPAR yes 54230237
chr17 38755417 38755432 FOXA1 JASPAR yes 21236639
chr17 38755417 38755432 FOXA1 JASPAR yes 54230238
chr17 38755418 38755429 FOXB1 JASPAR yes 21236640
chr17 38755418 38755429 FOXC1 JASPAR yes 21236641
chr17 38755418 38755429 FOXB1 JASPAR yes 54230239
chr17 38755418 38755429 FOXC1 JASPAR yes 54230240
chr17 38755423 38755437 SPI1 JASPAR yes 21236642
chr17 38755423 38755437 SPI1 JASPAR yes 54230241
chr17 38755425 38755446 IRF1 JASPAR yes 21236643
chr17 38755425 38755446 IRF1 JASPAR yes 54230242
chr17 38755429 38755444 PRDM1 JASPAR yes 21236644
chr17 38755429 38755444 PRDM1 JASPAR yes 54230243
chr17 38755431 38755446 FOXP1 JASPAR yes 21236645
chr17 38755431 38755446 FOXP1 JASPAR yes 54230244
chr17 38755431 38755452 IRF1 JASPAR yes 21236646
chr17 38755431 38755452 IRF1 JASPAR yes 54230245
chr17 38755436 38755451 FOXP1 JASPAR yes 21236647
chr17 38755436 38755451 FOXP1 JASPAR yes 54230246
chr17 38755451 38755457 YY1 JASPAR yes 21236648
chr17 38755451 38755457 YY1 JASPAR yes 54230247
chr17 38755458 38755462 YY1 TRANSFAC yes 21236649
chr17 38755458 38755462 YY1 TRANSFAC yes 54230248
chr17 38755467 38755471 YY1 TRANSFAC yes 21236650
chr17 38755467 38755471 YY1 TRANSFAC yes 54230249
chr17 38755480 38755491 GCM1 JASPAR yes 21236651
chr17 38755480 38755491 GCM1 JASPAR yes 54230250
chr17 38755489 38755501 GLI2 JASPAR yes 21236652
chr17 38755489 38755501 GLI2 JASPAR yes 54230251
chr17 38755511 38755526 NR2C2 JASPAR yes 21236653
chr17 38755511 38755526 NR2C2 JASPAR yes 54230252
chr17 38755512 38755522 SP1 JASPAR yes 21236654
chr17 38755512 38755522 SP1 JASPAR yes 54230253
chr17 38755513 38755523 SP1 JASPAR yes 21236655
chr17 38755513 38755523 SP1 JASPAR yes 54230254
chr17 38755514 38755518 LFA1 TRANSFAC yes 21236656
chr17 38755514 38755518 LFA1 TRANSFAC yes 54230255
chr17 38755514 38755526 INSM1 JASPAR yes 21236657
chr17 38755514 38755526 INSM1 JASPAR yes 54230256
chr17 38755532 38755538 NFIC JASPAR yes 21236658
chr17 38755532 38755538 NFIC JASPAR yes 54230257
chr17 38755536 38755540 YY1 TRANSFAC yes 21236659
chr17 38755536 38755540 YY1 TRANSFAC yes 54230258
chr17 38755546 38755566 RREB1 JASPAR yes 21236660
chr17 38755546 38755566 RREB1 JASPAR yes 54230259
chr17 38755546 38755567 IRF1 JASPAR yes 21236661
chr17 38755546 38755567 IRF1 JASPAR yes 54230260
chr17 38755547 38755562 MEF2C JASPAR yes 21236662
chr17 38755547 38755562 MEF2C JASPAR yes 54230261
chr17 38755547 38755568 IRF1 JASPAR yes 21236663
chr17 38755547 38755568 IRF1 JASPAR yes 54230262
chr17 38755551 38755563 IRF1 JASPAR yes 21236664
chr17 38755551 38755563 IRF1 JASPAR yes 54230263
chr17 38755551 38755565 IRF7 JASPAR yes 21236665
chr17 38755551 38755565 IRF7 JASPAR yes 54230264
chr17 38755553 38755559 TCF4 TRANSFAC yes 21236666
chr17 38755553 38755559 TCF4 TRANSFAC yes 54230265
chr17 38755553 38755568 FOXP1 JASPAR yes 21236667
chr17 38755553 38755568 FOXP1 JASPAR yes 54230266
chr17 38755559 38755565 TCF4 TRANSFAC yes 21236668
chr17 38755559 38755565 TCF4 TRANSFAC yes 54230267
chr17 38755562 38755582 RREB1 JASPAR yes 21236669
chr17 38755562 38755582 RREB1 JASPAR yes 54230268
chr17 38755580 38755590 NFKB1 JASPAR yes 21236670
chr17 38755580 38755590 NFKB1 JASPAR yes 54230269
chr17 38755583 38755597 EBF1 JASPAR yes 21236671
chr17 38755583 38755597 EBF1 JASPAR yes 54230270
chr17 38755584 38755595 EBF1 JASPAR yes 21236672
chr17 38755584 38755595 EBF1 JASPAR yes 54230271
chr17 38755600 38755606 ATF1 TRANSFAC yes 21236673
chr17 38755600 38755606 ATF1 TRANSFAC yes 54230272
chr17 38755608 38755629 ZNF263 JASPAR yes 21236674
chr17 38755608 38755629 ZNF263 JASPAR yes 54230273
chr17 38755613 38755634 ZNF263 JASPAR yes 21236675
chr17 38755613 38755634 ZNF263 JASPAR yes 54230274
chr17 38755614 38755628 PLAG1 JASPAR yes 21236676
chr17 38755614 38755628 PLAG1 JASPAR yes 54230275
chr17 38755615 38755636 ZNF263 JASPAR yes 21236677
chr17 38755615 38755636 ZNF263 JASPAR yes 54230276
chr17 38755616 38755637 ZNF263 JASPAR yes 21236678
chr17 38755616 38755637 ZNF263 JASPAR yes 54230277
chr17 38755618 38755632 SPI1 JASPAR yes 21236679
chr17 38755618 38755632 SPIC JASPAR yes 21236680
chr17 38755618 38755632 SPI1 JASPAR yes 54230278
chr17 38755618 38755632 SPIC JASPAR yes 54230279
chr17 38755622 38755643 ZNF263 JASPAR yes 21236681
chr17 38755622 38755643 ZNF263 JASPAR yes 54230280
chr17 38755667 38755672 ATF1 TRANSFAC yes 21236682
chr17 38755667 38755672 ATF1 TRANSFAC yes 54230281
chr17 38755677 38755681 LFA1 TRANSFAC yes 21236683
chr17 38755677 38755681 LFA1 TRANSFAC yes 54230282
chr17 38755686 38755691 TFAP2A TRANSFAC yes 21236684
chr17 38755686 38755691 TFAP2A TRANSFAC yes 54230283
chr17 38755686 38755692 MZF1 JASPAR yes 21236685
chr17 38755686 38755692 MZF1 JASPAR yes 54230284
chr17 38755705 38755709 ESR1 TRANSFAC yes 21236686
chr17 38755705 38755709 ESR1 TRANSFAC yes 54230285
chr17 38755712 38755730 RARA JASPAR yes 21236687
chr17 38755712 38755730 RARA JASPAR yes 54230286
chr17 38755715 38755722 NFATC2 JASPAR yes 21236688
chr17 38755715 38755722 NFATC2 JASPAR yes 54230287
chr17 38755721 38755738 RARA JASPAR yes 21236689
chr17 38755721 38755738 RARA JASPAR yes 54230288
chr17 38755722 38755726 H4TF2 TRANSFAC yes 21236690
chr17 38755722 38755726 H4TF2 TRANSFAC yes 54230289
chr17 38755731 38755739 MEIS2 JASPAR yes 21236691
chr17 38755731 38755739 MEIS3 JASPAR yes 21236692
chr17 38755731 38755739 MEIS2 JASPAR yes 54230290
chr17 38755731 38755739 MEIS3 JASPAR yes 54230291
chr17 38755732 38755736 NFE TRANSFAC yes 21236693
chr17 38755732 38755736 NFE TRANSFAC yes 54230292
chr17 38755739 38755760 ZNF263 JASPAR yes 21236694
chr17 38755739 38755760 ZNF263 JASPAR yes 54230293
chr17 38755753 38755759 NFE2 TRANSFAC yes 21236695
chr17 38755753 38755759 NFE2 TRANSFAC yes 54230294
chr17 38755766 38755771 MYC TRANSFAC yes 21236696
chr17 38755766 38755771 MYC TRANSFAC yes 54230295
chr17 38755771 38755775 LFA1 TRANSFAC yes 21236697
chr17 38755771 38755775 LFA1 TRANSFAC yes 54230296
chr17 38755777 38755793 ZNF143 JASPAR yes 21236698
chr17 38755777 38755793 ZNF143 JASPAR yes 54230297
chr17 38755783 38755793 PAX7 JASPAR yes 21236699
chr17 38755783 38755793 PAX7 JASPAR yes 54230298
chr17 38755783 38755794 PROP1 JASPAR yes 21236700
chr17 38755783 38755794 PROP1 JASPAR yes 54230299
chr17 38755788 38755792 YY1 TRANSFAC yes 21236701
chr17 38755788 38755792 YY1 TRANSFAC yes 54230300
chr17 38755797 38755807 RELA JASPAR yes 21236702
chr17 38755797 38755807 RELA JASPAR yes 54230301
chr17 38755801 38755819 SRF JASPAR yes 21236703
chr17 38755801 38755819 SRF JASPAR yes 54230302
chr17 38755820 38755826 ETS1 JASPAR yes 21236704
chr17 38755820 38755826 SPI1 JASPAR yes 21236705
chr17 38755820 38755826 ETS1 JASPAR yes 54230303
chr17 38755820 38755826 SPI1 JASPAR yes 54230304
chr17 38755820 38755830 ELK1 JASPAR yes 21236706
chr17 38755820 38755830 ELK1 JASPAR yes 54230305
chr17 38755821 38755834 HSF2 JASPAR yes 21236707
chr17 38755821 38755834 HSF2 JASPAR yes 54230306
chr17 38755827 38755837 CLOCK JASPAR yes 21236708
chr17 38755827 38755837 MYF6 JASPAR yes 21236709
chr17 38755827 38755837 NEUROG2 JASPAR yes 21236710
chr17 38755827 38755837 CLOCK JASPAR yes 54230307
chr17 38755827 38755837 MYF6 JASPAR yes 54230308
chr17 38755827 38755837 NEUROG2 JASPAR yes 54230309
chr17 38755828 38755838 MAX JASPAR yes 21236711
chr17 38755828 38755838 MAX JASPAR yes 54230310
chr17 38755864 38755884 RREB1 JASPAR yes 21236712
chr17 38755864 38755884 RREB1 JASPAR yes 54230311
chr17 38755880 38755900 PPARG JASPAR yes 21236713
chr17 38755880 38755900 PPARG JASPAR yes 54230312
chr17 38755881 38755901 PPARG JASPAR yes 21236714
chr17 38755881 38755901 PPARG JASPAR yes 54230313
chr17 38755882 38755888 ESR1 TRANSFAC yes 21236715
chr17 38755882 38755888 ESR1 TRANSFAC yes 54230314
chr17 38755882 38755900 ESR1 JASPAR yes 21236716
chr17 38755882 38755900 ESR2 JASPAR yes 21236717
chr17 38755882 38755900 ESR1 JASPAR yes 54230315
chr17 38755882 38755900 ESR2 JASPAR yes 54230316
chr17 38755883 38755898 ESR2 JASPAR yes 21236718
chr17 38755883 38755898 ESR2 JASPAR yes 54230317
chr17 38755884 38755888 ESR1 TRANSFAC yes 21236719
chr17 38755884 38755888 ESR1 TRANSFAC yes 54230318
chr17 38755910 38755922 INSM1 JASPAR yes 21236720
chr17 38755910 38755922 INSM1 JASPAR yes 54230319
chr17 38755924 38755936 CREB1 JASPAR yes 21236721
chr17 38755924 38755936 CREB1 JASPAR yes 54230320
chr17 38755929 38755934 ATF1 TRANSFAC yes 21236722
chr17 38755929 38755934 ATF1 TRANSFAC yes 54230321
SNP sites on vista24746[chr17:38755372-38755931]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38755409 rs36056428 G A,T
ATF2 BATF EBF1 EP300 FOXM1 MEF2A MEF2C MTA3 NFATC1 NFIC PAX5 RUNX3 SPI1 STAT5A TBL1XR1
4868661
chr17 38755486 rs150606889 C G
ATF2 BATF EBF1 EP300 FOXM1 GCM1 MEF2A MEF2C MTA3 NFATC1 NFIC PAX5 RUNX3 SPI1 STAT5A TBL1XR1
4868662
chr17 38755632 rs138728247 G A
ATF2 EBF1 EP300 FOXM1 MTA3 NFATC1 NFIC RUNX3 SPI1 SPIC STAT5A ZNF263
4868663
chr17 38755661 rs117714834 C T
ATF2 EBF1 EP300 FOXM1 MTA3 NFIC RUNX3 STAT5A
4868664
chr17 38755665 rs11656173 C T
ATF2 EBF1 EP300 FOXM1 MTA3 NFIC RUNX3 STAT5A
4868665
chr17 38755686 rs149365281 T C
ATF2 EBF1 EP300 FOXM1 MTA3 MZF1 NFIC RUNX3 TFAP2A
4868666
chr17 38755694 rs182439597 A G
ATF2 EBF1 EP300 MTA3 NFIC RUNX3
4868667
chr17 38755844 rs147483110 G A no 4868668
Genes possibly regulated by vista24746[chr17:38755372-38755931]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 2477
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 66352
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 51171
chr17 38785049 38821393 - KRT222 ENSG00000264058.1 38821393 0.92 1.0 15772 34538
chr17 38810917 38821433 - KRT222 ENSG00000213424.4 38821433 0.82 0.98 15773 34498
Expression level of Genes
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miRNAs possibly regulated by vista24746[chr17:38755372-38755931]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results