EnhancerDB
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  3. vista24748[chr17:38759098-38759390]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24748[chr17:38759098-38759390]
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Tissue distribution of vista24748
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Transcription factor that possibly regulate vista24748[chr17:38759098-38759390]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38759120 38759563 RUNX3 UCSC Txn Factor no Conserved 108257537
chr17 38759140 38759617 EBF1 UCSC Txn Factor no Conserved 108257542
chr17 38759149 38759582 ATF2 UCSC Txn Factor no Conserved 108257543
chr17 38759160 38759530 EP300 UCSC Txn Factor no Conserved 108257549
chr17 38759195 38759541 FOXM1 UCSC Txn Factor no Conserved 108257553
chr17 38759198 38759560 BCL3 UCSC Txn Factor no Conserved 108257555
chr17 38759210 38759431 BATF UCSC Txn Factor no Conserved 108257558
chr17 38759238 38759574 TCF12 UCSC Txn Factor no Conserved 108257568
chr17 38759082 38759099 BCL6B JASPAR yes 21236741
chr17 38759082 38759099 BCL6B JASPAR yes 54230753
chr17 38759131 38759139 FOXO3 JASPAR yes 21236742
chr17 38759131 38759139 FOXO3 JASPAR yes 54230754
chr17 38759133 38759140 NFATC2 JASPAR yes 21236743
chr17 38759133 38759140 NFATC2 JASPAR yes 54230755
chr17 38759143 38759154 STAT3 JASPAR yes 21236744
chr17 38759143 38759154 STAT3 JASPAR yes 54230756
chr17 38759150 38759171 ZNF263 JASPAR yes 21236745
chr17 38759150 38759171 ZNF263 JASPAR yes 54230757
chr17 38759175 38759178 MYB TRANSFAC yes 21236746
chr17 38759175 38759178 MYB TRANSFAC yes 54230758
chr17 38759184 38759194 NKX2-3 JASPAR yes 21236747
chr17 38759184 38759194 NKX2-3 JASPAR yes 54230759
chr17 38759185 38759194 NKX2-8 JASPAR yes 21236748
chr17 38759185 38759194 NKX2-8 JASPAR yes 54230760
chr17 38759185 38759199 TCF7L2 JASPAR yes 21236749
chr17 38759185 38759199 TCF7L2 JASPAR yes 54230761
chr17 38759191 38759211 RREB1 JASPAR yes 21236750
chr17 38759191 38759211 RREB1 JASPAR yes 54230762
chr17 38759194 38759200 HiNF-A TRANSFAC yes 21236751
chr17 38759194 38759200 HiNF-A TRANSFAC yes 54230763
chr17 38759213 38759219 SOX10 JASPAR yes 21236752
chr17 38759213 38759219 SOX10 JASPAR yes 54230764
chr17 38759243 38759263 RREB1 JASPAR yes 21236753
chr17 38759243 38759263 RREB1 JASPAR yes 54230765
chr17 38759245 38759265 RREB1 JASPAR yes 21236754
chr17 38759245 38759265 RREB1 JASPAR yes 54230766
chr17 38759247 38759267 RREB1 JASPAR yes 21236755
chr17 38759247 38759267 RREB1 JASPAR yes 54230767
chr17 38759248 38759260 INSM1 JASPAR yes 21236756
chr17 38759248 38759260 INSM1 JASPAR yes 54230768
chr17 38759263 38759284 IRF1 JASPAR yes 21236757
chr17 38759263 38759284 IRF1 JASPAR yes 54230769
chr17 38759340 38759344 NFE TRANSFAC yes 21236758
chr17 38759340 38759344 NFE TRANSFAC yes 54230770
chr17 38759374 38759389 ZIC4 JASPAR yes 21236759
chr17 38759374 38759389 ZIC4 JASPAR yes 54230771
chr17 38759374 38759390 GLIS1 JASPAR yes 21236760
chr17 38759374 38759390 GLIS1 JASPAR yes 54230772
chr17 38759375 38759389 GLIS2 JASPAR yes 21236761
chr17 38759375 38759389 GLIS3 JASPAR yes 21236762
chr17 38759375 38759389 ZIC1 JASPAR yes 21236763
chr17 38759375 38759389 GLIS2 JASPAR yes 54230773
chr17 38759375 38759389 GLIS3 JASPAR yes 54230774
chr17 38759375 38759389 ZIC1 JASPAR yes 54230775
chr17 38759379 38759389 ZNF740 JASPAR yes 21236764
chr17 38759379 38759389 ZNF740 JASPAR yes 54230776
chr17 38759385 38759389 ESR1 TRANSFAC yes 21236765
chr17 38759385 38759389 ESR1 TRANSFAC yes 54230777
SNP sites on vista24748[chr17:38759098-38759390]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38759371 rs531549034 G C
ATF2 BATF BCL3 EBF1 EP300 FOXM1 RUNX3 TCF12
4868709
Genes possibly regulated by vista24748[chr17:38759098-38759390]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 62626
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 54630
chr17 38785049 38821393 - KRT222 ENSG00000264058.1 38821393 0.92 1.0 15772 37997
chr17 38810917 38821433 - KRT222 ENSG00000213424.4 38821433 0.82 0.98 15773 37957
Expression level of Genes
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miRNAs possibly regulated by vista24748[chr17:38759098-38759390]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results