EnhancerDB
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  3. vista24749[chr17:38761647-38761980]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24749[chr17:38761647-38761980]
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Tissue distribution of vista24749
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Transcription factor that possibly regulate vista24749[chr17:38761647-38761980]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38761655 38761670 HNF4A JASPAR yes 21236766
chr17 38761655 38761670 HNF4A JASPAR yes 54231058
chr17 38761656 38761671 HNF4G JASPAR yes 21236767
chr17 38761656 38761671 HNF4G JASPAR yes 54231059
chr17 38761660 38761666 SOX10 JASPAR yes 21236768
chr17 38761660 38761666 SOX10 JASPAR yes 54231060
chr17 38761671 38761675 YY1 TRANSFAC yes 21236769
chr17 38761671 38761675 YY1 TRANSFAC yes 54231061
chr17 38761704 38761708 LFA1 TRANSFAC yes 21236770
chr17 38761704 38761708 LFA1 TRANSFAC yes 54231062
chr17 38761760 38761764 YY1 TRANSFAC yes 21236771
chr17 38761760 38761764 YY1 TRANSFAC yes 54231063
chr17 38761766 38761772 SOX10 JASPAR yes 21236772
chr17 38761766 38761772 SOX10 JASPAR yes 54231064
chr17 38761774 38761784 SREBF2 JASPAR yes 21236773
chr17 38761774 38761784 SREBF2 JASPAR yes 54231065
chr17 38761779 38761794 SOX21 JASPAR yes 21236774
chr17 38761779 38761794 SOX21 JASPAR yes 54231066
chr17 38761786 38761806 RREB1 JASPAR yes 21236775
chr17 38761786 38761806 RREB1 JASPAR yes 54231067
chr17 38761809 38761822 SMAD2 JASPAR yes 21236776
chr17 38761809 38761822 SMAD2 JASPAR yes 54231068
chr17 38761822 38761835 NFKB1 JASPAR yes 21236777
chr17 38761822 38761835 NFKB2 JASPAR yes 21236778
chr17 38761822 38761835 NFKB1 JASPAR yes 54231069
chr17 38761822 38761835 NFKB2 JASPAR yes 54231070
chr17 38761827 38761836 ZEB1 JASPAR yes 21236779
chr17 38761827 38761836 ZEB1 JASPAR yes 54231071
chr17 38761830 38761835 USF2 TRANSFAC yes 21236780
chr17 38761830 38761835 USF2 TRANSFAC yes 54231072
chr17 38761877 38761892 STAT1 JASPAR yes 21236781
chr17 38761877 38761892 STAT1 JASPAR yes 54231073
chr17 38761879 38761890 STAT3 JASPAR yes 21236782
chr17 38761879 38761890 STAT3 JASPAR yes 54231074
chr17 38761891 38761895 NFE TRANSFAC yes 21236783
chr17 38761891 38761895 NFE TRANSFAC yes 54231075
chr17 38761891 38761904 SMAD2 JASPAR yes 21236784
chr17 38761891 38761904 SMAD2 JASPAR yes 54231076
chr17 38761956 38761964 SP1 TRANSFAC yes 21236785
chr17 38761956 38761964 SP1 TRANSFAC yes 54231077
chr17 38761961 38761972 EBF1 JASPAR yes 21236786
chr17 38761961 38761972 EBF1 JASPAR yes 54231078
SNP sites on vista24749[chr17:38761647-38761980]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38761711 rs117996577 A G no 4868740
chr17 38761724 rs542245883 C T no 4868741
chr17 38761774 rs150256201 C T
SREBF2
4868742
Genes possibly regulated by vista24749[chr17:38761647-38761980]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 60077
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 57220
chr17 38785049 38821393 - KRT222 ENSG00000264058.1 38821393 0.92 1.0 15772 40587
chr17 38810917 38821433 - KRT222 ENSG00000213424.4 38821433 0.82 0.98 15773 40547
chr17 38854243 38860002 - KRT24 ENSG00000167916.4 38860002 0.99 0.98 15774 1978
Expression level of Genes
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miRNAs possibly regulated by vista24749[chr17:38761647-38761980]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results