EnhancerDB
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  3. vista2476[chr1:93634565-93634982]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2476[chr1:93634565-93634982]
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Tissue distribution of vista2476
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Transcription factor that possibly regulate vista2476[chr1:93634565-93634982]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 93634574 93634578 NFE TRANSFAC yes 30793930
chr1 93634574 93634578 NFE TRANSFAC yes 118329608
chr1 93634577 93634589 HNF1B JASPAR yes 30793931
chr1 93634577 93634589 HNF1B JASPAR yes 118329609
chr1 93634578 93634586 HOXA5 JASPAR yes 30793932
chr1 93634578 93634586 HOXA5 JASPAR yes 118329610
chr1 93634602 93634616 ONECUT3 JASPAR yes 30793933
chr1 93634602 93634616 ONECUT3 JASPAR yes 118329611
chr1 93634604 93634618 SPIC JASPAR yes 30793934
chr1 93634604 93634618 SPIC JASPAR yes 118329612
chr1 93634615 93634620 GATA2 JASPAR yes 30793935
chr1 93634615 93634620 GATA2 JASPAR yes 118329613
chr1 93634638 93634650 PBX1 JASPAR yes 30793936
chr1 93634638 93634650 PBX1 JASPAR yes 118329614
chr1 93634654 93634664 ALX3 JASPAR yes 30793937
chr1 93634654 93634664 MIXL1 JASPAR yes 30793938
chr1 93634654 93634664 ALX3 JASPAR yes 118329615
chr1 93634654 93634664 MIXL1 JASPAR yes 118329616
chr1 93634655 93634663 LHX9 JASPAR yes 30793939
chr1 93634655 93634663 SHOX JASPAR yes 30793940
chr1 93634655 93634663 LHX9 JASPAR yes 118329617
chr1 93634655 93634663 SHOX JASPAR yes 118329618
chr1 93634655 93634668 DUXA JASPAR yes 30793941
chr1 93634655 93634668 DUXA JASPAR yes 118329619
chr1 93634656 93634667 DUX4 JASPAR yes 30793942
chr1 93634656 93634667 PHOX2A JASPAR yes 30793943
chr1 93634656 93634667 DUX4 JASPAR yes 118329620
chr1 93634656 93634667 PHOX2A JASPAR yes 118329621
chr1 93634658 93634663 MYB TRANSFAC yes 30793944
chr1 93634658 93634663 MYB TRANSFAC yes 118329622
chr1 93634668 93634681 DUXA JASPAR yes 30793945
chr1 93634668 93634681 DUXA JASPAR yes 118329623
chr1 93634669 93634680 DUX4 JASPAR yes 30793946
chr1 93634669 93634680 DUX4 JASPAR yes 118329624
chr1 93634671 93634685 ONECUT1 JASPAR yes 30793947
chr1 93634671 93634685 ONECUT2 JASPAR yes 30793948
chr1 93634671 93634685 ONECUT1 JASPAR yes 118329625
chr1 93634671 93634685 ONECUT2 JASPAR yes 118329626
chr1 93634672 93634682 LHX6 JASPAR yes 30793949
chr1 93634672 93634682 LHX6 JASPAR yes 118329627
chr1 93634674 93634684 CUX1 JASPAR yes 30793950
chr1 93634674 93634684 CUX2 JASPAR yes 30793951
chr1 93634674 93634684 CUX1 JASPAR yes 118329628
chr1 93634674 93634684 CUX2 JASPAR yes 118329629
chr1 93634674 93634686 PBX1 JASPAR yes 30793952
chr1 93634674 93634686 PBX1 JASPAR yes 118329630
chr1 93634682 93634686 H1TF2 TRANSFAC yes 30793953
chr1 93634682 93634686 NFE TRANSFAC yes 30793954
chr1 93634682 93634686 SRF TRANSFAC yes 30793955
chr1 93634682 93634686 H1TF2 TRANSFAC yes 118329631
chr1 93634682 93634686 NFE TRANSFAC yes 118329632
chr1 93634682 93634686 SRF TRANSFAC yes 118329633
chr1 93634686 93634695 THAP1 JASPAR yes 30793956
chr1 93634686 93634695 THAP1 JASPAR yes 118329634
chr1 93634687 93634693 YY1 JASPAR yes 30793957
chr1 93634687 93634693 YY1 JASPAR yes 118329635
chr1 93634697 93634700 MYB TRANSFAC yes 30793958
chr1 93634697 93634700 MYB TRANSFAC yes 118329636
chr1 93634698 93634710 TEAD1 JASPAR yes 30793959
chr1 93634698 93634710 TEAD1 JASPAR yes 118329637
chr1 93634708 93634719 ESRRB JASPAR yes 30793960
chr1 93634708 93634719 ESRRB JASPAR yes 118329638
chr1 93634716 93634729 HSF1 JASPAR yes 30793961
chr1 93634716 93634729 HSF1 JASPAR yes 118329639
chr1 93634749 93634760 CDX2 JASPAR yes 30793962
chr1 93634749 93634760 CDX2 JASPAR yes 118329640
chr1 93634750 93634761 HOXA10 JASPAR yes 30793963
chr1 93634750 93634761 HOXD12 JASPAR yes 30793964
chr1 93634750 93634761 HOXA10 JASPAR yes 118329641
chr1 93634750 93634761 HOXD12 JASPAR yes 118329642
chr1 93634751 93634760 CDX1 JASPAR yes 30793965
chr1 93634751 93634760 CDX1 JASPAR yes 118329643
chr1 93634751 93634761 HOXA13 JASPAR yes 30793966
chr1 93634751 93634761 HOXB13 JASPAR yes 30793967
chr1 93634751 93634761 HOXD13 JASPAR yes 30793968
chr1 93634751 93634761 HOXA13 JASPAR yes 118329644
chr1 93634751 93634761 HOXB13 JASPAR yes 118329645
chr1 93634751 93634761 HOXD13 JASPAR yes 118329646
chr1 93634757 93634763 HiNF-A TRANSFAC yes 30793969
chr1 93634757 93634763 HiNF-A TRANSFAC yes 118329647
chr1 93634759 93634767 TBX5 JASPAR yes 30793970
chr1 93634759 93634767 TBX5 JASPAR yes 118329648
chr1 93634776 93634780 NFE TRANSFAC yes 30793971
chr1 93634776 93634780 NFE TRANSFAC yes 118329649
chr1 93634778 93634788 SREBF2 JASPAR yes 30793972
chr1 93634778 93634788 SREBF2 JASPAR yes 118329650
chr1 93634780 93634795 RUNX2 JASPAR yes 30793973
chr1 93634780 93634795 RUNX2 JASPAR yes 118329651
chr1 93634801 93634816 HNF1A JASPAR yes 30793974
chr1 93634801 93634816 HNF1A JASPAR yes 118329652
chr1 93634802 93634815 HNF1B JASPAR yes 30793975
chr1 93634802 93634815 HNF1B JASPAR yes 118329653
chr1 93634811 93634814 MYB TRANSFAC yes 30793976
chr1 93634811 93634814 MYB TRANSFAC yes 118329654
chr1 93634812 93634827 MEF2C JASPAR yes 30793977
chr1 93634812 93634827 MEF2C JASPAR yes 118329655
chr1 93634813 93634828 MEF2A JASPAR yes 30793978
chr1 93634813 93634828 MEF2A JASPAR yes 118329656
chr1 93634841 93634845 YY1 TRANSFAC yes 30793979
chr1 93634841 93634845 YY1 TRANSFAC yes 118329657
chr1 93634852 93634867 RUNX2 JASPAR yes 30793980
chr1 93634852 93634867 RUNX2 JASPAR yes 118329658
chr1 93634853 93634862 RUNX2 JASPAR yes 30793981
chr1 93634853 93634862 RUNX2 JASPAR yes 118329659
chr1 93634853 93634863 RUNX3 JASPAR yes 30793982
chr1 93634853 93634863 RUNX3 JASPAR yes 118329660
chr1 93634853 93634864 RUNX1 JASPAR yes 30793983
chr1 93634853 93634864 RUNX1 JASPAR yes 118329661
chr1 93634861 93634865 YY1 TRANSFAC yes 30793984
chr1 93634861 93634865 YY1 TRANSFAC yes 118329662
chr1 93634865 93634869 TEAD2 TRANSFAC yes 30793985
chr1 93634865 93634869 TEAD2 TRANSFAC yes 118329663
chr1 93634865 93634870 TBP TRANSFAC yes 30793986
chr1 93634865 93634870 TBP TRANSFAC yes 118329664
chr1 93634882 93634888 SOX10 JASPAR yes 30793987
chr1 93634882 93634888 SOX10 JASPAR yes 118329665
chr1 93634896 93634904 GATA3 JASPAR yes 30793988
chr1 93634896 93634904 GATA3 JASPAR yes 118329666
chr1 93634911 93634914 MYB TRANSFAC yes 30793989
chr1 93634911 93634914 MYB TRANSFAC yes 118329667
chr1 93634921 93634936 FOXP1 JASPAR yes 30793990
chr1 93634921 93634936 FOXP1 JASPAR yes 118329668
chr1 93634921 93634942 IRF1 JASPAR yes 30793991
chr1 93634921 93634942 IRF1 JASPAR yes 118329669
chr1 93634922 93634935 POU2F2 JASPAR yes 30793992
chr1 93634922 93634935 POU2F2 JASPAR yes 118329670
chr1 93634938 93634941 MYB TRANSFAC yes 30793993
chr1 93634938 93634941 MYB TRANSFAC yes 118329671
chr1 93634945 93634953 HOXA5 JASPAR yes 30793994
chr1 93634945 93634953 HOXA5 JASPAR yes 118329672
chr1 93634953 93634958 GATA2 JASPAR yes 30793995
chr1 93634953 93634958 GATA2 JASPAR yes 118329673
SNP sites on vista2476[chr1:93634565-93634982]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 93634590 rs6685271 C A no 487041
chr1 93634591 rs6697683 A G no 487042
chr1 93634624 rs532470292 T C no 487043
Genes possibly regulated by vista2476[chr1:93634565-93634982]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 93544792 93604638 + MTF2 ENSG00000143033.13 93544792 0.84 0.99 902 10227
chr1 93615299 93646285 - TMED5 ENSG00000117500.8 93646285 0.8 0.99 903 88697
chr1 93645476 93744287 + CCDC18 ENSG00000122483.13 93645476 0.87 0.99 904 89506
Expression level of Genes
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miRNAs possibly regulated by vista2476[chr1:93634565-93634982]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results