EnhancerDB
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  3. vista24761[chr17:39069125-39069341]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24761[chr17:39069125-39069341]
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Tissue distribution of vista24761
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Transcription factor that possibly regulate vista24761[chr17:39069125-39069341]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39069112 39069126 ONECUT1 JASPAR yes 21237347
chr17 39069112 39069126 ONECUT2 JASPAR yes 21237348
chr17 39069112 39069126 ONECUT1 JASPAR yes 54243690
chr17 39069112 39069126 ONECUT2 JASPAR yes 54243691
chr17 39069115 39069125 PAX3 JASPAR yes 21237349
chr17 39069115 39069125 PAX7 JASPAR yes 21237350
chr17 39069115 39069125 PAX3 JASPAR yes 54243692
chr17 39069115 39069125 PAX7 JASPAR yes 54243693
chr17 39069121 39069129 FEV JASPAR yes 21237351
chr17 39069121 39069129 FEV JASPAR yes 54243694
chr17 39069123 39069128 ETS2 TRANSFAC yes 21237352
chr17 39069123 39069128 ETS2 TRANSFAC yes 54243695
chr17 39069125 39069133 GATA5 JASPAR yes 21237353
chr17 39069125 39069133 GATA5 JASPAR yes 54243696
chr17 39069131 39069142 DMRT3 JASPAR yes 21237354
chr17 39069131 39069142 DMRT3 JASPAR yes 54243697
chr17 39069145 39069160 HNF1A JASPAR yes 21237355
chr17 39069145 39069160 HNF1A JASPAR yes 54243698
chr17 39069146 39069159 HNF1B JASPAR yes 21237356
chr17 39069146 39069159 HNF1B JASPAR yes 54243699
chr17 39069149 39069159 POU6F1 JASPAR yes 21237357
chr17 39069149 39069159 POU6F1 JASPAR yes 54243700
chr17 39069159 39069167 OTX2 JASPAR yes 21237358
chr17 39069159 39069167 OTX2 JASPAR yes 54243701
chr17 39069162 39069176 FOXF2 JASPAR yes 21237359
chr17 39069162 39069176 FOXF2 JASPAR yes 54243702
chr17 39069164 39069168 YY1 TRANSFAC yes 21237360
chr17 39069164 39069168 YY1 TRANSFAC yes 54243703
chr17 39069180 39069197 RXRA JASPAR yes 21237361
chr17 39069180 39069197 RXRA JASPAR yes 54243704
chr17 39069182 39069190 MEIS3 JASPAR yes 21237362
chr17 39069182 39069190 MEIS3 JASPAR yes 54243705
chr17 39069195 39069200 MYC TRANSFAC yes 21237363
chr17 39069195 39069200 MYC TRANSFAC yes 54243706
chr17 39069200 39069204 LFA1 TRANSFAC yes 21237364
chr17 39069200 39069204 LFA1 TRANSFAC yes 54243707
chr17 39069211 39069225 POU1F1 JASPAR yes 21237365
chr17 39069211 39069225 POU1F1 JASPAR yes 54243708
chr17 39069219 39069232 POU3F3 JASPAR yes 21237366
chr17 39069219 39069232 POU3F3 JASPAR yes 54243709
chr17 39069228 39069236 FEV JASPAR yes 21237367
chr17 39069228 39069236 FEV JASPAR yes 54243710
chr17 39069230 39069235 ETS2 TRANSFAC yes 21237368
chr17 39069230 39069235 ETS2 TRANSFAC yes 54243711
chr17 39069248 39069262 SPI1 JASPAR yes 21237369
chr17 39069248 39069262 SPIC JASPAR yes 21237370
chr17 39069248 39069262 SPI1 JASPAR yes 54243712
chr17 39069248 39069262 SPIC JASPAR yes 54243713
chr17 39069251 39069256 ETS2 TRANSFAC yes 21237371
chr17 39069251 39069256 ETS2 TRANSFAC yes 54243714
chr17 39069253 39069265 SRF JASPAR yes 21237372
chr17 39069253 39069265 SRF JASPAR yes 54243715
chr17 39069256 39069260 YY1 TRANSFAC yes 21237373
chr17 39069256 39069260 YY1 TRANSFAC yes 54243716
chr17 39069269 39069283 JUN JASPAR yes 21237374
chr17 39069269 39069283 JUN JASPAR yes 54243717
chr17 39069272 39069283 FOSL2 JASPAR yes 21237375
chr17 39069272 39069283 JUNB JASPAR yes 21237376
chr17 39069272 39069283 FOSL2 JASPAR yes 54243718
chr17 39069272 39069283 JUNB JASPAR yes 54243719
chr17 39069273 39069284 FOS JASPAR yes 21237377
chr17 39069273 39069284 FOSL1 JASPAR yes 21237378
chr17 39069273 39069284 JUND JASPAR yes 21237379
chr17 39069273 39069284 NFE2 JASPAR yes 21237380
chr17 39069273 39069284 FOS JASPAR yes 54243720
chr17 39069273 39069284 FOSL1 JASPAR yes 54243721
chr17 39069273 39069284 JUND JASPAR yes 54243722
chr17 39069273 39069284 NFE2 JASPAR yes 54243723
chr17 39069274 39069281 JUN TRANSFAC yes 21237381
chr17 39069274 39069281 JUN TRANSFAC yes 54243724
chr17 39069274 39069283 JDP2 JASPAR yes 21237382
chr17 39069274 39069283 JDP2 JASPAR yes 54243725
chr17 39069274 39069285 FOSL2 JASPAR yes 21237383
chr17 39069274 39069285 JUNB JASPAR yes 21237384
chr17 39069274 39069285 FOSL2 JASPAR yes 54243726
chr17 39069274 39069285 JUNB JASPAR yes 54243727
chr17 39069274 39069288 JUN JASPAR yes 21237385
chr17 39069274 39069288 JUN JASPAR yes 54243728
chr17 39069290 39069303 ELF1 JASPAR yes 21237386
chr17 39069290 39069303 ELF1 JASPAR yes 54243729
chr17 39069293 39069304 ELK4 JASPAR yes 21237387
chr17 39069293 39069304 FLI1 JASPAR yes 21237388
chr17 39069293 39069304 ELK4 JASPAR yes 54243730
chr17 39069293 39069304 FLI1 JASPAR yes 54243731
chr17 39069305 39069309 YY1 TRANSFAC yes 21237389
chr17 39069305 39069309 YY1 TRANSFAC yes 54243732
chr17 39069306 39069316 HOXC10 JASPAR yes 21237390
chr17 39069306 39069316 HOXD11 JASPAR yes 21237391
chr17 39069306 39069316 HOXC10 JASPAR yes 54243733
chr17 39069306 39069316 HOXD11 JASPAR yes 54243734
chr17 39069306 39069317 HOXA10 JASPAR yes 21237392
chr17 39069306 39069317 HOXC11 JASPAR yes 21237393
chr17 39069306 39069317 HOXC12 JASPAR yes 21237394
chr17 39069306 39069317 HOXD12 JASPAR yes 21237395
chr17 39069306 39069317 HOXA10 JASPAR yes 54243735
chr17 39069306 39069317 HOXC11 JASPAR yes 54243736
chr17 39069306 39069317 HOXC12 JASPAR yes 54243737
chr17 39069306 39069317 HOXD12 JASPAR yes 54243738
chr17 39069307 39069317 MEOX2 JASPAR yes 21237396
chr17 39069307 39069317 MNX1 JASPAR yes 21237397
chr17 39069307 39069317 MEOX2 JASPAR yes 54243739
chr17 39069307 39069317 MNX1 JASPAR yes 54243740
chr17 39069308 39069316 NKX6-1 JASPAR yes 21237398
chr17 39069308 39069316 NKX6-1 JASPAR yes 54243741
SNP sites on vista24761[chr17:39069125-39069341]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39069174 rs112141785 T C
FOXF2
4870346
chr17 39069221 rs11653734 A G
POU1F1 POU3F3
4870347
chr17 39069224 rs11654753 T G
POU1F1 POU3F3
4870348
Genes possibly regulated by vista24761[chr17:39069125-39069341]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38974369 38978847 - KRT10 ENSG00000186395.6 38978847 0.63 0.99 15779 9722
chr17 38975358 38992522 + TMEM99 ENSG00000167920.4 38975358 0.74 1.0 15780 6233
chr17 39017555 39023462 - KRT12 ENSG00000187242.4 39023462 0.89 0.97 15781 54337
chr17 39032193 39041479 - KRT20 ENSG00000171431.3 39041479 1.0 1.0 15782 72354
chr17 39078948 39093886 - KRT23 ENSG00000108244.12 39093886 0.98 1.0 15783 75455
chr17 39114669 39123144 - KRT39 ENSG00000196859.3 39123144 0.81 1.0 15784 46197
chr17 39133968 39143387 - KRT40 ENSG00000204889.6 39143387 0.88 1.0 15785 25954
chr17 39149686 39150385 - KRTAP3-3 ENSG00000212899.1 39150385 1.0 0.0 15786 18956
chr17 39155447 39156138 - KRTAP3-2 ENSG00000212900.1 39156138 0.97 1.0 15787 13203
Expression level of Genes
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miRNAs possibly regulated by vista24761[chr17:39069125-39069341]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results