EnhancerDB
  1. Home
  2. Enhancers
  3. vista24767[chr17:39218168-39218609]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24767[chr17:39218168-39218609]
Back to top
Tissue distribution of vista24767
Back to top
Transcription factor that possibly regulate vista24767[chr17:39218168-39218609]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39218182 39218192 NEUROG2 JASPAR yes 21237702
chr17 39218213 39218228 HNF1A JASPAR yes 21237703
chr17 39218214 39218224 ESX1 JASPAR yes 21237704
chr17 39218214 39218224 GSX2 JASPAR yes 21237705
chr17 39218214 39218224 HOXB2 JASPAR yes 21237706
chr17 39218214 39218224 HOXB3 JASPAR yes 21237707
chr17 39218214 39218224 LHX6 JASPAR yes 21237708
chr17 39218214 39218224 MEOX2 JASPAR yes 21237709
chr17 39218214 39218224 MNX1 JASPAR yes 21237710
chr17 39218214 39218224 POU6F1 JASPAR yes 21237711
chr17 39218214 39218224 RAX JASPAR yes 21237712
chr17 39218214 39218227 HNF1B JASPAR yes 21237713
chr17 39218215 39218223 LMX1A JASPAR yes 21237714
chr17 39218215 39218223 LMX1B JASPAR yes 21237715
chr17 39218215 39218223 NKX6-1 JASPAR yes 21237716
chr17 39218215 39218223 NKX6-2 JASPAR yes 21237717
chr17 39218215 39218223 VAX1 JASPAR yes 21237718
chr17 39218215 39218223 VAX2 JASPAR yes 21237719
chr17 39218215 39218223 VSX1 JASPAR yes 21237720
chr17 39218215 39218223 VSX2 JASPAR yes 21237721
chr17 39218220 39218224 YY1 TRANSFAC yes 21237722
chr17 39218252 39218267 FOXP1 JASPAR yes 21237723
chr17 39218253 39218264 FOXA1 JASPAR yes 21237724
chr17 39218255 39218266 FOXP2 JASPAR yes 21237725
chr17 39218256 39218264 FOXO3 JASPAR yes 21237726
chr17 39218265 39218279 XBP1 JASPAR yes 21237727
chr17 39218266 39218280 CREB3 JASPAR yes 21237728
chr17 39218268 39218278 MLX JASPAR yes 21237729
chr17 39218298 39218302 YY1 TRANSFAC yes 21237730
chr17 39218303 39218307 TEAD2 TRANSFAC yes 21237731
chr17 39218308 39218311 MYB TRANSFAC yes 21237732
chr17 39218311 39218315 YY1 TRANSFAC yes 21237733
chr17 39218322 39218328 LEF1 TRANSFAC yes 21237734
chr17 39218322 39218328 SOX10 JASPAR yes 21237735
chr17 39218345 39218349 H4TF2 TRANSFAC yes 21237736
chr17 39218353 39218364 USF1 JASPAR yes 21237737
chr17 39218353 39218364 USF2 JASPAR yes 21237738
chr17 39218354 39218364 MAX JASPAR yes 21237739
chr17 39218354 39218366 GLI2 JASPAR yes 21237740
chr17 39218379 39218383 YY1 TRANSFAC yes 21237741
chr17 39218412 39218417 GATA2 JASPAR yes 21237742
chr17 39218425 39218435 MAX JASPAR yes 21237743
chr17 39218464 39218474 TEAD1 JASPAR yes 21237744
chr17 39218464 39218474 TEAD4 JASPAR yes 21237745
chr17 39218471 39218480 NKX2-8 JASPAR yes 21237746
chr17 39218471 39218481 NKX2-3 JASPAR yes 21237747
chr17 39218477 39218488 NFE2L2 JASPAR yes 21237748
chr17 39218491 39218501 NFATC3 JASPAR yes 21237749
chr17 39218493 39218501 FOXO3 JASPAR yes 21237750
chr17 39218513 39218528 PRDM1 JASPAR yes 21237751
chr17 39218525 39218528 MYB TRANSFAC yes 21237752
chr17 39218548 39218553 GATA2 JASPAR yes 21237753
chr17 39218552 39218560 GATA3 JASPAR yes 21237754
chr17 39218552 39218570 NR3C1 JASPAR yes 21237755
chr17 39218555 39218571 SOX8 JASPAR yes 21237756
chr17 39218556 39218566 TEAD1 JASPAR yes 21237757
chr17 39218562 39218579 RXRA JASPAR yes 21237758
chr17 39218569 39218582 NR2F1 JASPAR yes 21237759
chr17 39218570 39218589 CTCF JASPAR yes 21237760
chr17 39218572 39218580 NR4A2 JASPAR yes 21237761
chr17 39218587 39218592 SP1 TRANSFAC yes 21237762
SNP sites on vista24767[chr17:39218168-39218609]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39218195 rs372937212 T C no 4871174
chr17 39218306 rs76228597 T C
TEAD2
4871175
chr17 39218313 rs74421445 A C,G
YY1
4871176
chr17 39218316 rs534787089 TCTC T no 4871177
chr17 39218372 rs77525318 C T no 4871178
chr17 39218410 rs7223620 A G no 4871179
chr17 39218429 rs149792688 C T
MAX
4871180
chr17 39218517 rs144758714 C T
PRDM1
4871181
chr17 39218549 rs565589180 GGATA G
GATA2
4871182
Genes possibly regulated by vista24767[chr17:39218168-39218609]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39114669 39123144 - KRT39 ENSG00000196859.3 39123144 0.81 1.0 15784 4976
chr17 39133968 39143387 - KRT40 ENSG00000204889.6 39143387 0.88 1.0 15785 25219
chr17 39149686 39150385 - KRTAP3-3 ENSG00000212899.1 39150385 1.0 0.0 15786 32217
chr17 39155447 39156138 - KRTAP3-2 ENSG00000212900.1 39156138 0.97 1.0 15787 37970
chr17 39164773 39175576 - KRTAP3-1 ENSG00000212901.2 39175576 0.97 0.96 15788 57408
chr17 39182278 39183454 - KRTAP1-5 ENSG00000221852.4 39183454 0.98 0.97 15789 65286
chr17 39185949 39186356 - KRTAP1-4 ENSG00000204887.4 39186356 0.0 0.0 15790 68188
chr17 39190142 39191107 - KRTAP1-3 ENSG00000221880.2 39191107 0.98 0.0 15791 72939
chr17 39196811 39197713 - KRTAP1-1 ENSG00000188581.8 39197713 0.99 1.0 15792 79545
chr17 39202793 39203568 - KRTAP2-1 ENSG00000212725.3 39203568 0.96 1.0 15793 85400
chr17 39210750 39211482 - KRTAP2-2 ENSG00000214518.3 39211482 0.0 1.0 15794 93314
chr17 39215495 39216344 - KRTAP2-3 ENSG00000212724.2 39216344 1.0 1.0 15795 98176
chr17 39221369 39222131 - KRTAP2-4 ENSG00000213417.2 39222131 1.0 1.0 15796 96478
chr17 39240459 39241396 + KRTAP4-7 ENSG00000240871.3 39240459 1.0 1.0 15797 78150
chr17 39253233 39254393 - KRTAP4-8 ENSG00000204880.6 39254393 1.0 0.0 15798 64216
chr17 39257754 39258461 - KRTAP4-16P ENSG00000241241.1 39258461 0.0 1.0 15799 60148
chr17 39261584 39262740 + KRTAP4-9 ENSG00000212722.6 39261584 1.0 1.0 15800 57025
chr17 39273433 39274606 - KRTAP4-11 ENSG00000212721.2 39274606 1.0 1.0 15801 44003
chr17 39279343 39280419 - KRTAP4-12 ENSG00000213416.3 39280419 0.0 1.0 15802 38190
chr17 39295685 39296739 - KRTAP4-6 ENSG00000198090.3 39296739 0.0 1.0 15803 21870
chr17 39305178 39306054 - KRTAP4-5 ENSG00000198271.3 39306054 0.0 0.0 15804 12555
chr17 39315910 39316983 - KRTAP4-4 ENSG00000171396.10 39316983 1.0 0.0 15805 1626
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24767[chr17:39218168-39218609]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results