EnhancerDB
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  3. vista2477[chr1:93660433-93660767]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2477[chr1:93660433-93660767]
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Tissue distribution of vista2477
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Transcription factor that possibly regulate vista2477[chr1:93660433-93660767]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 93660461 93660465 NFE TRANSFAC yes 118329674
chr1 93660461 93660474 SMAD2 JASPAR yes 118329675
chr1 93660483 93660493 SREBF1 JASPAR yes 118329676
chr1 93660483 93660493 SREBF2 JASPAR yes 118329677
chr1 93660483 93660496 EOMES JASPAR yes 118329678
chr1 93660484 93660492 MGA JASPAR yes 118329679
chr1 93660488 93660496 NR4A2 JASPAR yes 118329680
chr1 93660491 93660510 PAX5 JASPAR yes 118329681
chr1 93660498 93660519 ZNF263 JASPAR yes 118329682
chr1 93660509 93660519 SP1 JASPAR yes 118329683
chr1 93660511 93660516 SP1 TRANSFAC yes 118329684
chr1 93660511 93660517 SP1 TRANSFAC yes 118329685
chr1 93660511 93660518 SP1 TRANSFAC yes 118329686
chr1 93660513 93660524 EBF1 JASPAR yes 118329687
chr1 93660522 93660537 AR JASPAR yes 118329688
chr1 93660529 93660543 SPI1 JASPAR yes 118329689
chr1 93660588 93660598 POU6F2 JASPAR yes 118329690
chr1 93660589 93660599 EMX1 JASPAR yes 118329691
chr1 93660589 93660599 EMX2 JASPAR yes 118329692
chr1 93660589 93660599 ESX1 JASPAR yes 118329693
chr1 93660589 93660599 EVX1 JASPAR yes 118329694
chr1 93660589 93660599 EVX2 JASPAR yes 118329695
chr1 93660589 93660599 GBX2 JASPAR yes 118329696
chr1 93660589 93660599 HESX1 JASPAR yes 118329697
chr1 93660589 93660599 HOXA2 JASPAR yes 118329698
chr1 93660589 93660599 HOXB2 JASPAR yes 118329699
chr1 93660589 93660599 HOXB3 JASPAR yes 118329700
chr1 93660589 93660599 LHX2 JASPAR yes 118329701
chr1 93660589 93660599 LHX6 JASPAR yes 118329702
chr1 93660589 93660599 MEOX1 JASPAR yes 118329703
chr1 93660589 93660599 MEOX2 JASPAR yes 118329704
chr1 93660589 93660599 POU6F1 JASPAR yes 118329705
chr1 93660589 93660599 RAX JASPAR yes 118329706
chr1 93660590 93660598 LBX1 JASPAR yes 118329707
chr1 93660590 93660598 PDX1 JASPAR yes 118329708
chr1 93660590 93660598 VAX1 JASPAR yes 118329709
chr1 93660590 93660598 VAX2 JASPAR yes 118329710
chr1 93660590 93660598 VSX1 JASPAR yes 118329711
chr1 93660590 93660598 VSX2 JASPAR yes 118329712
chr1 93660596 93660611 MEF2A JASPAR yes 118329713
chr1 93660597 93660612 MEF2C JASPAR yes 118329714
chr1 93660598 93660610 MEF2A JASPAR yes 118329715
chr1 93660598 93660610 MEF2B JASPAR yes 118329716
chr1 93660598 93660610 MEF2D JASPAR yes 118329717
chr1 93660600 93660604 YY1 TRANSFAC yes 118329718
chr1 93660618 93660629 CEBPB JASPAR yes 118329719
chr1 93660632 93660636 ESR1 TRANSFAC yes 118329720
chr1 93660650 93660663 NR2F1 JASPAR yes 118329721
chr1 93660654 93660662 CREB1 JASPAR yes 118329722
chr1 93660666 93660672 ZNF354C JASPAR yes 118329723
chr1 93660671 93660685 PLAG1 JASPAR yes 118329724
chr1 93660676 93660683 E2F1 TRANSFAC yes 118329725
chr1 93660723 93660738 HNF1A JASPAR yes 118329726
chr1 93660724 93660736 HNF1B JASPAR yes 118329727
chr1 93660724 93660736 MEF2B JASPAR yes 118329728
chr1 93660724 93660737 HNF1B JASPAR yes 118329729
chr1 93660726 93660741 FOXA1 JASPAR yes 118329730
chr1 93660728 93660740 FOXC2 JASPAR yes 118329731
chr1 93660728 93660742 ONECUT2 JASPAR yes 118329732
chr1 93660728 93660742 ONECUT3 JASPAR yes 118329733
chr1 93660729 93660740 FOXB1 JASPAR yes 118329734
chr1 93660729 93660740 FOXC1 JASPAR yes 118329735
chr1 93660730 93660741 FOXA1 JASPAR yes 118329736
chr1 93660732 93660747 HNF4G JASPAR yes 118329737
chr1 93660746 93660752 SOX10 JASPAR yes 118329738
chr1 93660746 93660760 JUN JASPAR yes 118329739
chr1 93660749 93660760 JUNB JASPAR yes 118329740
chr1 93660752 93660758 JUN TRANSFAC yes 118329741
SNP sites on vista2477[chr1:93660433-93660767]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 93660460 rs75904444 C T no 487146
chr1 93660703 rs148099054 C T no 487147
chr1 93660738 rs17131710 T G
FOXA1 FOXB1 FOXC1 FOXC2 HNF1A HNF4G ONECUT2 ONECUT3
487148
Genes possibly regulated by vista2477[chr1:93660433-93660767]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 93615299 93646285 - TMED5 ENSG00000117500.8 93646285 0.8 0.99 903 85852
chr1 93645476 93744287 + CCDC18 ENSG00000122483.13 93645476 0.87 0.99 904 85043
Expression level of Genes
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miRNAs possibly regulated by vista2477[chr1:93660433-93660767]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results