EnhancerDB
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  3. vista24772[chr17:39653134-39653351]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24772[chr17:39653134-39653351]
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Tissue distribution of vista24772
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Transcription factor that possibly regulate vista24772[chr17:39653134-39653351]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39652963 39653297 SMC3 UCSC Txn Factor no Conserved 108258235
chr17 39652974 39653377 CTCF UCSC Txn Factor no Conserved 108258236
chr17 39652978 39653782 POLR2A UCSC Txn Factor no Conserved 108258238
chr17 39653018 39653286 RAD21 UCSC Txn Factor no Conserved 108258248
chr17 39653138 39653158 ESR1 JASPAR yes 21237881
chr17 39653138 39653158 ESR1 JASPAR yes 54261560
chr17 39653140 39653150 SREBF1 JASPAR yes 21237882
chr17 39653140 39653150 SREBF2 JASPAR yes 21237883
chr17 39653140 39653150 SREBF1 JASPAR yes 54261561
chr17 39653140 39653150 SREBF2 JASPAR yes 54261562
chr17 39653141 39653159 ESR1 JASPAR yes 21237884
chr17 39653141 39653159 ESR1 JASPAR yes 54261563
chr17 39653142 39653160 ESR2 JASPAR yes 21237885
chr17 39653142 39653160 ESR2 JASPAR yes 54261564
chr17 39653143 39653158 ESR2 JASPAR yes 21237886
chr17 39653143 39653158 ESR2 JASPAR yes 54261565
chr17 39653147 39653158 NRF1 JASPAR yes 21237887
chr17 39653147 39653158 NRF1 JASPAR yes 54261566
chr17 39653149 39653168 CTCF JASPAR yes 21237888
chr17 39653149 39653168 CTCF JASPAR yes 54261567
chr17 39653151 39653157 NFE2 TRANSFAC yes 21237889
chr17 39653151 39653157 NFE2 TRANSFAC yes 54261568
chr17 39653152 39653166 GLIS2 JASPAR yes 21237890
chr17 39653152 39653166 ZIC1 JASPAR yes 21237891
chr17 39653152 39653166 GLIS2 JASPAR yes 54261569
chr17 39653152 39653166 ZIC1 JASPAR yes 54261570
chr17 39653152 39653167 ZIC3 JASPAR yes 21237892
chr17 39653152 39653167 ZIC4 JASPAR yes 21237893
chr17 39653152 39653167 ZIC3 JASPAR yes 54261571
chr17 39653152 39653167 ZIC4 JASPAR yes 54261572
chr17 39653152 39653169 RARA JASPAR yes 21237894
chr17 39653152 39653169 RARA JASPAR yes 54261573
chr17 39653169 39653173 LFA1 TRANSFAC yes 21237895
chr17 39653169 39653173 LFA1 TRANSFAC yes 54261574
chr17 39653179 39653185 YY1 JASPAR yes 21237896
chr17 39653179 39653185 YY1 JASPAR yes 54261575
chr17 39653190 39653197 CEBPA TRANSFAC yes 21237897
chr17 39653190 39653197 CEBPA TRANSFAC yes 54261576
chr17 39653195 39653199 LFA1 TRANSFAC yes 21237898
chr17 39653195 39653199 LFA1 TRANSFAC yes 54261577
chr17 39653212 39653226 EBF1 JASPAR yes 21237899
chr17 39653212 39653226 EBF1 JASPAR yes 54261578
chr17 39653213 39653224 EBF1 JASPAR yes 21237900
chr17 39653213 39653224 EBF1 JASPAR yes 54261579
chr17 39653214 39653220 MZF1 JASPAR yes 21237901
chr17 39653214 39653220 MZF1 JASPAR yes 54261580
chr17 39653221 39653242 ZNF263 JASPAR yes 21237902
chr17 39653221 39653242 ZNF263 JASPAR yes 54261581
chr17 39653224 39653245 ZNF263 JASPAR yes 21237903
chr17 39653224 39653245 ZNF263 JASPAR yes 54261582
chr17 39653225 39653238 ELF1 JASPAR yes 21237904
chr17 39653225 39653238 ELF1 JASPAR yes 54261583
chr17 39653228 39653235 ETS1 TRANSFAC yes 21237905
chr17 39653228 39653235 ETS1 TRANSFAC yes 54261584
chr17 39653228 39653238 GABPA JASPAR yes 21237906
chr17 39653228 39653238 GABPA JASPAR yes 54261585
chr17 39653235 39653246 E2F6 JASPAR yes 21237907
chr17 39653235 39653246 E2F6 JASPAR yes 54261586
chr17 39653261 39653274 ELF1 JASPAR yes 21237908
chr17 39653261 39653274 ELF1 JASPAR yes 54261587
chr17 39653261 39653282 ZNF263 JASPAR yes 21237909
chr17 39653261 39653282 ZNF263 JASPAR yes 54261588
chr17 39653262 39653274 EHF JASPAR yes 21237910
chr17 39653262 39653274 EHF JASPAR yes 54261589
chr17 39653262 39653275 ELF3 JASPAR yes 21237911
chr17 39653262 39653275 ELF3 JASPAR yes 54261590
chr17 39653263 39653274 ELF5 JASPAR yes 21237912
chr17 39653263 39653274 ELF5 JASPAR yes 54261591
chr17 39653264 39653270 PEA3 TRANSFAC yes 21237913
chr17 39653264 39653270 PEA3 TRANSFAC yes 54261592
chr17 39653264 39653274 ETV6 JASPAR yes 21237914
chr17 39653264 39653274 ETV6 JASPAR yes 54261593
chr17 39653264 39653275 ELK4 JASPAR yes 21237915
chr17 39653264 39653275 FLI1 JASPAR yes 21237916
chr17 39653264 39653275 ELK4 JASPAR yes 54261594
chr17 39653264 39653275 FLI1 JASPAR yes 54261595
chr17 39653265 39653273 EHF JASPAR yes 21237917
chr17 39653265 39653273 EHF JASPAR yes 54261596
chr17 39653266 39653273 SPI1 JASPAR yes 21237918
chr17 39653266 39653273 SPI1 JASPAR yes 54261597
chr17 39653300 39653314 CREB3 JASPAR yes 21237919
chr17 39653300 39653314 CREB3L1 JASPAR yes 21237920
chr17 39653300 39653314 CREB3 JASPAR yes 54261598
chr17 39653300 39653314 CREB3L1 JASPAR yes 54261599
chr17 39653321 39653340 CTCF JASPAR yes 21237921
chr17 39653321 39653340 CTCF JASPAR yes 54261600
chr17 39653324 39653338 ZIC1 JASPAR yes 21237922
chr17 39653324 39653338 ZIC1 JASPAR yes 54261601
chr17 39653324 39653339 ZIC3 JASPAR yes 21237923
chr17 39653324 39653339 ZIC4 JASPAR yes 21237924
chr17 39653324 39653339 ZIC3 JASPAR yes 54261602
chr17 39653324 39653339 ZIC4 JASPAR yes 54261603
chr17 39653324 39653345 ZNF263 JASPAR yes 21237925
chr17 39653324 39653345 ZNF263 JASPAR yes 54261604
chr17 39653334 39653349 NR2C2 JASPAR yes 21237926
chr17 39653334 39653349 NR2C2 JASPAR yes 54261605
chr17 39653339 39653350 E2F6 JASPAR yes 21237927
chr17 39653339 39653350 E2F6 JASPAR yes 54261606
chr17 39653347 39653366 REST JASPAR yes 21237928
chr17 39653347 39653366 REST JASPAR yes 54261607
SNP sites on vista24772[chr17:39653134-39653351]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39653212 rs57333321 C T
CTCF EBF1 POLR2A RAD21 SMC3
4872889
chr17 39653215 rs73983500 T C
CTCF EBF1 MZF1 POLR2A RAD21 SMC3
4872890
Genes possibly regulated by vista24772[chr17:39653134-39653351]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39549976 39553844 - KRT31 ENSG00000094796.4 39553844 0.99 1.0 15823 710
chr17 39577005 39580775 - KRT37 ENSG00000108417.3 39580775 0.98 1.0 15824 27641
chr17 39592698 39597173 - KRT38 ENSG00000171360.3 39597173 0.99 1.0 15825 44039
chr17 39616063 39623681 - KRT32 ENSG00000108759.3 39623681 0.96 1.0 15826 70547
chr17 39632941 39637392 - KRT35 ENSG00000197079.4 39637392 0.93 1.0 15827 84258
chr17 39642388 39648798 - KRT36 ENSG00000126337.9 39648798 0.97 1.0 15828 95664
chr17 39657233 39661957 - KRT13 ENSG00000171401.10 39661957 1.0 1.0 15829 91394
chr17 39669995 39678781 - KRT15 ENSG00000171346.9 39678781 0.94 1.0 15830 74570
chr17 39679869 39684560 - KRT19 ENSG00000171345.9 39684560 0.79 1.0 15831 68791
chr17 39722096 39728310 - KRT9 ENSG00000171403.5 39728310 0.99 1.0 15832 25041
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 10178
Expression level of Genes
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miRNAs possibly regulated by vista24772[chr17:39653134-39653351]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results