EnhancerDB
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  3. vista24777[chr17:39682585-39682843]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24777[chr17:39682585-39682843]
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Tissue distribution of vista24777
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Transcription factor that possibly regulate vista24777[chr17:39682585-39682843]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39680759 39682635 POLR2A UCSC Txn Factor no Conserved 108258481
chr17 39682596 39682608 HLF JASPAR yes 21238106
chr17 39682608 39682612 YY1 TRANSFAC yes 21238107
chr17 39682628 39682648 RREB1 JASPAR yes 21238108
chr17 39682637 39682657 TBX19 JASPAR yes 21238109
chr17 39682639 39682655 T JASPAR yes 21238110
chr17 39682646 39682656 TBX21 JASPAR yes 21238111
chr17 39682646 39682657 TBX20 JASPAR yes 21238112
chr17 39682646 39682657 TBX2 JASPAR yes 21238113
chr17 39682646 39682659 EOMES JASPAR yes 21238114
chr17 39682647 39682657 TBR1 JASPAR yes 21238115
chr17 39682674 39682685 HOXC12 JASPAR yes 21238116
chr17 39682675 39682685 HOXC10 JASPAR yes 21238117
chr17 39682675 39682685 HOXD11 JASPAR yes 21238118
chr17 39682685 39682692 NKX3-1 JASPAR yes 21238119
chr17 39682689 39682705 E2F2 JASPAR yes 21238120
chr17 39682695 39682716 IRF1 JASPAR yes 21238121
chr17 39682700 39682715 FOXP1 JASPAR yes 21238122
chr17 39682701 39682716 FOXP1 JASPAR yes 21238123
chr17 39682702 39682717 FOXP1 JASPAR yes 21238124
chr17 39682703 39682718 FOXP1 JASPAR yes 21238125
chr17 39682704 39682719 FOXP1 JASPAR yes 21238126
chr17 39682713 39682724 DMRT3 JASPAR yes 21238127
chr17 39682724 39682743 PAX5 JASPAR yes 21238128
chr17 39682733 39682748 TFAP2C JASPAR yes 21238129
chr17 39682735 39682750 TFAP2A JASPAR yes 21238130
chr17 39682736 39682747 TFAP2A JASPAR yes 21238131
chr17 39682736 39682747 TFAP2B JASPAR yes 21238132
chr17 39682736 39682747 TFAP2C JASPAR yes 21238133
chr17 39682737 39682746 TFAP2A JASPAR yes 21238134
chr17 39682751 39682769 ESR1 JASPAR yes 21238135
chr17 39682797 39682806 NFIX JASPAR yes 21238136
chr17 39682799 39682805 NFIC JASPAR yes 21238137
chr17 39682804 39682825 IRF1 JASPAR yes 21238138
chr17 39682807 39682821 SPI1 JASPAR yes 21238139
chr17 39682808 39682829 IRF1 JASPAR yes 21238140
chr17 39682809 39682830 IRF1 JASPAR yes 21238141
chr17 39682810 39682815 ETS2 TRANSFAC yes 21238142
chr17 39682810 39682831 IRF1 JASPAR yes 21238143
chr17 39682811 39682832 IRF1 JASPAR yes 21238144
chr17 39682812 39682827 FOXP1 JASPAR yes 21238145
chr17 39682812 39682833 IRF1 JASPAR yes 21238146
chr17 39682813 39682828 FOXP1 JASPAR yes 21238147
chr17 39682813 39682834 IRF1 JASPAR yes 21238148
chr17 39682814 39682829 FOXP1 JASPAR yes 21238149
chr17 39682814 39682835 IRF1 JASPAR yes 21238150
chr17 39682815 39682830 FOXP1 JASPAR yes 21238151
chr17 39682815 39682836 IRF1 JASPAR yes 21238152
chr17 39682816 39682831 FOXP1 JASPAR yes 21238153
chr17 39682816 39682837 IRF1 JASPAR yes 21238154
chr17 39682817 39682832 FOXP1 JASPAR yes 21238155
chr17 39682817 39682838 IRF1 JASPAR yes 21238156
chr17 39682818 39682833 FOXP1 JASPAR yes 21238157
chr17 39682818 39682839 IRF1 JASPAR yes 21238158
chr17 39682819 39682834 FOXP1 JASPAR yes 21238159
chr17 39682819 39682840 IRF1 JASPAR yes 21238160
chr17 39682820 39682835 FOXP1 JASPAR yes 21238161
chr17 39682820 39682841 IRF1 JASPAR yes 21238162
chr17 39682821 39682836 FOXP1 JASPAR yes 21238163
chr17 39682821 39682842 IRF1 JASPAR yes 21238164
chr17 39682822 39682837 FOXP1 JASPAR yes 21238165
chr17 39682823 39682838 FOXP1 JASPAR yes 21238166
chr17 39682824 39682839 FOXP1 JASPAR yes 21238167
chr17 39682825 39682840 FOXP1 JASPAR yes 21238168
chr17 39682826 39682841 FOXP1 JASPAR yes 21238169
chr17 39682827 39682842 FOXP1 JASPAR yes 21238170
chr17 39682828 39682843 FOXP1 JASPAR yes 21238171
SNP sites on vista24777[chr17:39682585-39682843]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39682603 rs8065433 G T
HLF POLR2A
4873211
chr17 39682624 rs78714899 A G
POLR2A
4873212
chr17 39682693 rs575320857 T C
E2F2
4873213
chr17 39682701 rs35664318 ATT A
E2F2 FOXP1 IRF1
4873214
chr17 39682701 rs775282255 ATT A
E2F2 FOXP1 IRF1
4873215
chr17 39682701 rs796562237 ATT A
E2F2 FOXP1 IRF1
4873216
chr17 39682740 rs184293635 C T
PAX5 TFAP2A TFAP2B TFAP2C
4873217
chr17 39682770 rs540967977 G A no 4873218
Genes possibly regulated by vista24777[chr17:39682585-39682843]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39592698 39597173 - KRT38 ENSG00000171360.3 39597173 0.99 1.0 15825 14588
chr17 39616063 39623681 - KRT32 ENSG00000108759.3 39623681 0.96 1.0 15826 41096
chr17 39632941 39637392 - KRT35 ENSG00000197079.4 39637392 0.93 1.0 15827 54807
chr17 39642388 39648798 - KRT36 ENSG00000126337.9 39648798 0.97 1.0 15828 66213
chr17 39657233 39661957 - KRT13 ENSG00000171401.10 39661957 1.0 1.0 15829 79372
chr17 39669995 39678781 - KRT15 ENSG00000171346.9 39678781 0.94 1.0 15830 96196
chr17 39679869 39684560 - KRT19 ENSG00000171345.9 39684560 0.79 1.0 15831 98283
chr17 39722096 39728310 - KRT9 ENSG00000171403.5 39728310 0.99 1.0 15832 54533
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 39670
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 0.99 1.0 15834 10692
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 1.0 1.0 15835 1749
Expression level of Genes
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miRNAs possibly regulated by vista24777[chr17:39682585-39682843]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 39673418 39673438 - hsa-miR-6510-3p MIMAT0025477 39675141 0.008590264367050677 0.0 0.0 704
Expression level of miRNAs
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