EnhancerDB
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  3. vista2479[chr1:93694062-93694249]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2479[chr1:93694062-93694249]
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Tissue distribution of vista2479
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Transcription factor that possibly regulate vista2479[chr1:93694062-93694249]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 93694059 93694074 MEF2C JASPAR yes 30795044
chr1 93694059 93694074 MEF2C JASPAR yes 118329771
chr1 93694061 93694076 FOXP1 JASPAR yes 30795045
chr1 93694061 93694076 FOXP1 JASPAR yes 118329772
chr1 93694062 93694077 FOXP1 JASPAR yes 30795046
chr1 93694062 93694077 FOXP1 JASPAR yes 118329773
chr1 93694063 93694069 TBP TRANSFAC yes 30795047
chr1 93694063 93694069 TBP TRANSFAC yes 118329774
chr1 93694063 93694078 FOXP1 JASPAR yes 30795048
chr1 93694063 93694078 FOXP1 JASPAR yes 118329775
chr1 93694064 93694079 FOXP1 JASPAR yes 30795049
chr1 93694064 93694079 FOXP1 JASPAR yes 118329776
chr1 93694065 93694080 FOXP1 JASPAR yes 30795050
chr1 93694065 93694080 FOXP1 JASPAR yes 118329777
chr1 93694066 93694081 FOXP1 JASPAR yes 30795051
chr1 93694066 93694081 FOXP1 JASPAR yes 118329778
chr1 93694066 93694087 IRF1 JASPAR yes 30795052
chr1 93694066 93694087 IRF1 JASPAR yes 118329779
chr1 93694067 93694082 FOXP1 JASPAR yes 30795053
chr1 93694067 93694082 FOXP1 JASPAR yes 118329780
chr1 93694070 93694085 STAT2 JASPAR yes 30795054
chr1 93694070 93694085 STAT2 JASPAR yes 118329781
chr1 93694086 93694104 RARA JASPAR yes 30795055
chr1 93694086 93694104 RARA JASPAR yes 118329782
chr1 93694096 93694100 ESR1 TRANSFAC yes 30795056
chr1 93694096 93694100 ESR1 TRANSFAC yes 118329783
chr1 93694110 93694114 NFE TRANSFAC yes 30795057
chr1 93694110 93694114 NFE TRANSFAC yes 118329784
chr1 93694131 93694147 RFX2 JASPAR yes 30795058
chr1 93694131 93694147 RFX3 JASPAR yes 30795059
chr1 93694131 93694147 RFX4 JASPAR yes 30795060
chr1 93694131 93694147 RFX2 JASPAR yes 118329785
chr1 93694131 93694147 RFX3 JASPAR yes 118329786
chr1 93694131 93694147 RFX4 JASPAR yes 118329787
chr1 93694133 93694143 HOXA13 JASPAR yes 30795061
chr1 93694133 93694143 HOXB13 JASPAR yes 30795062
chr1 93694133 93694143 HOXD13 JASPAR yes 30795063
chr1 93694133 93694143 HOXA13 JASPAR yes 118329788
chr1 93694133 93694143 HOXB13 JASPAR yes 118329789
chr1 93694133 93694143 HOXD13 JASPAR yes 118329790
chr1 93694134 93694143 CDX1 JASPAR yes 30795064
chr1 93694134 93694143 CDX1 JASPAR yes 118329791
chr1 93694134 93694145 CDX2 JASPAR yes 30795065
chr1 93694134 93694145 CDX2 JASPAR yes 118329792
chr1 93694147 93694154 MEIS1 JASPAR yes 30795066
chr1 93694147 93694154 MEIS1 JASPAR yes 118329793
chr1 93694147 93694155 MEIS2 JASPAR yes 30795067
chr1 93694147 93694155 MEIS3 JASPAR yes 30795068
chr1 93694147 93694155 MEIS2 JASPAR yes 118329794
chr1 93694147 93694155 MEIS3 JASPAR yes 118329795
chr1 93694153 93694163 NEUROG2 JASPAR yes 30795069
chr1 93694153 93694163 NEUROG2 JASPAR yes 118329796
chr1 93694159 93694163 YY1 TRANSFAC yes 30795070
chr1 93694159 93694163 YY1 TRANSFAC yes 118329797
chr1 93694171 93694175 H1TF2 TRANSFAC yes 30795071
chr1 93694171 93694175 NFE TRANSFAC yes 30795072
chr1 93694171 93694175 SRF TRANSFAC yes 30795073
chr1 93694171 93694175 H1TF2 TRANSFAC yes 118329798
chr1 93694171 93694175 NFE TRANSFAC yes 118329799
chr1 93694171 93694175 SRF TRANSFAC yes 118329800
chr1 93694173 93694181 FOXL1 JASPAR yes 30795074
chr1 93694173 93694181 FOXL1 JASPAR yes 118329801
chr1 93694196 93694211 AR JASPAR yes 30795075
chr1 93694196 93694211 AR JASPAR yes 118329802
chr1 93694214 93694229 MEF2C JASPAR yes 30795076
chr1 93694214 93694229 MEF2C JASPAR yes 118329803
chr1 93694215 93694230 MEF2A JASPAR yes 30795077
chr1 93694215 93694230 MEF2A JASPAR yes 118329804
chr1 93694216 93694228 MEF2A JASPAR yes 30795078
chr1 93694216 93694228 MEF2B JASPAR yes 30795079
chr1 93694216 93694228 MEF2D JASPAR yes 30795080
chr1 93694216 93694228 MEF2A JASPAR yes 118329805
chr1 93694216 93694228 MEF2B JASPAR yes 118329806
chr1 93694216 93694228 MEF2D JASPAR yes 118329807
chr1 93694217 93694227 MEF2A JASPAR yes 30795081
chr1 93694217 93694227 MEF2A JASPAR yes 118329808
chr1 93694222 93694234 TEAD1 JASPAR yes 30795082
chr1 93694222 93694234 TEAD1 JASPAR yes 118329809
chr1 93694224 93694234 TEAD1 JASPAR yes 30795083
chr1 93694224 93694234 TEAD4 JASPAR yes 30795084
chr1 93694224 93694234 TEAD1 JASPAR yes 118329810
chr1 93694224 93694234 TEAD4 JASPAR yes 118329811
chr1 93694225 93694233 TEAD3 JASPAR yes 30795085
chr1 93694225 93694233 TEAD3 JASPAR yes 118329812
chr1 93694229 93694250 IRF1 JASPAR yes 30795086
chr1 93694229 93694250 IRF1 JASPAR yes 118329813
chr1 93694231 93694252 IRF1 JASPAR yes 30795087
chr1 93694231 93694252 IRF1 JASPAR yes 118329814
chr1 93694234 93694249 FOXP1 JASPAR yes 30795088
chr1 93694234 93694249 FOXP1 JASPAR yes 118329815
chr1 93694235 93694250 FOXP1 JASPAR yes 30795089
chr1 93694235 93694250 FOXP1 JASPAR yes 118329816
chr1 93694239 93694254 FOXP1 JASPAR yes 30795090
chr1 93694239 93694254 FOXP1 JASPAR yes 118329817
chr1 93694242 93694252 HOXD11 JASPAR yes 30795091
chr1 93694242 93694252 HOXD11 JASPAR yes 118329818
SNP sites on vista2479[chr1:93694062-93694249]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 93694064 rs34585083 TA T
FOXP1 MEF2C TBP
487197
chr1 93694078 rs114476081 A C
FOXP1 IRF1 STAT2
487198
chr1 93694172 rs545281988 C G
H1TF2 NFE SRF
487199
chr1 93694235 rs35733080 C CT,CTT
FOXP1 IRF1
487200
Genes possibly regulated by vista2479[chr1:93694062-93694249]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 93615299 93646285 - TMED5 ENSG00000117500.8 93646285 0.8 0.99 903 52223
chr1 93645476 93744287 + CCDC18 ENSG00000122483.13 93645476 0.87 0.99 904 51414
Expression level of Genes
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miRNAs possibly regulated by vista2479[chr1:93694062-93694249]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results