EnhancerDB
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  3. vista24790[chr17:39802138-39802335]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24790[chr17:39802138-39802335]
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Tissue distribution of vista24790
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Transcription factor that possibly regulate vista24790[chr17:39802138-39802335]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39802058 39802378 MAFK UCSC Txn Factor no Conserved 108259178
chr17 39802128 39802430 JUND UCSC Txn Factor no Conserved 108259185
chr17 39802191 39802290 MAFF UCSC Txn Factor no Conserved 108259195
chr17 39802133 39802154 REST JASPAR yes 21238709
chr17 39802133 39802154 REST JASPAR yes 54267727
chr17 39802134 39802153 REST JASPAR yes 21238710
chr17 39802134 39802153 REST JASPAR yes 54267728
chr17 39802136 39802151 TFAP2A JASPAR yes 21238711
chr17 39802136 39802151 TFAP2C JASPAR yes 21238712
chr17 39802136 39802151 TFAP2A JASPAR yes 54267729
chr17 39802136 39802151 TFAP2C JASPAR yes 54267730
chr17 39802138 39802153 TFAP2A JASPAR yes 21238713
chr17 39802138 39802153 TFAP2C JASPAR yes 21238714
chr17 39802138 39802153 TFAP2A JASPAR yes 54267731
chr17 39802138 39802153 TFAP2C JASPAR yes 54267732
chr17 39802139 39802151 TFAP2A JASPAR yes 21238715
chr17 39802139 39802151 TFAP2B JASPAR yes 21238716
chr17 39802139 39802151 TFAP2C JASPAR yes 21238717
chr17 39802139 39802151 TFAP2A JASPAR yes 54267733
chr17 39802139 39802151 TFAP2B JASPAR yes 54267734
chr17 39802139 39802151 TFAP2C JASPAR yes 54267735
chr17 39802149 39802158 NKX2-8 JASPAR yes 21238718
chr17 39802149 39802158 NKX2-8 JASPAR yes 54267736
chr17 39802149 39802159 NKX2-3 JASPAR yes 21238719
chr17 39802149 39802159 NKX2-3 JASPAR yes 54267737
chr17 39802170 39802181 TBX20 JASPAR yes 21238720
chr17 39802170 39802181 TBX20 JASPAR yes 54267738
chr17 39802175 39802185 SREBF1 JASPAR yes 21238721
chr17 39802175 39802185 SREBF1 JASPAR yes 54267739
chr17 39802226 39802239 ZBTB18 JASPAR yes 21238722
chr17 39802226 39802239 ZBTB18 JASPAR yes 54267740
chr17 39802230 39802251 MAFG JASPAR yes 21238723
chr17 39802230 39802251 MAFG JASPAR yes 54267741
chr17 39802235 39802253 MAFF JASPAR yes 21238724
chr17 39802235 39802253 MAFF JASPAR yes 54267742
chr17 39802236 39802247 NFE2L2 JASPAR yes 21238725
chr17 39802236 39802247 NFE2L2 JASPAR yes 54267743
chr17 39802245 39802249 YY1 TRANSFAC yes 21238726
chr17 39802245 39802249 YY1 TRANSFAC yes 54267744
chr17 39802253 39802264 BATF JASPAR yes 21238727
chr17 39802253 39802264 BATF JASPAR yes 54267745
chr17 39802257 39802263 JUN TRANSFAC yes 21238728
chr17 39802257 39802263 JUN TRANSFAC yes 54267746
chr17 39802261 39802264 MYB TRANSFAC yes 21238729
chr17 39802261 39802264 MYB TRANSFAC yes 54267747
chr17 39802267 39802272 SP1 TRANSFAC yes 21238730
chr17 39802267 39802272 SP1 TRANSFAC yes 54267748
chr17 39802269 39802287 RARA JASPAR yes 21238731
chr17 39802269 39802287 RARA JASPAR yes 54267749
chr17 39802271 39802286 JUND JASPAR yes 21238732
chr17 39802271 39802286 JUND JASPAR yes 54267750
chr17 39802272 39802285 JUN JASPAR yes 21238733
chr17 39802272 39802285 JUN JASPAR yes 54267751
chr17 39802273 39802287 ATF7 JASPAR yes 21238734
chr17 39802273 39802287 BATF3 JASPAR yes 21238735
chr17 39802273 39802287 ATF7 JASPAR yes 54267752
chr17 39802273 39802287 BATF3 JASPAR yes 54267753
chr17 39802274 39802286 JDP2 JASPAR yes 21238736
chr17 39802274 39802286 JDP2 JASPAR yes 54267754
chr17 39802274 39802289 JUND JASPAR yes 21238737
chr17 39802274 39802289 JUND JASPAR yes 54267755
chr17 39802291 39802296 GATA2 JASPAR yes 21238738
chr17 39802291 39802296 GATA2 JASPAR yes 54267756
chr17 39802296 39802301 ETS2 TRANSFAC yes 21238739
chr17 39802296 39802301 ETS2 TRANSFAC yes 54267757
chr17 39802304 39802321 RARA JASPAR yes 21238740
chr17 39802304 39802321 RARA JASPAR yes 54267758
chr17 39802321 39802327 ETS1 JASPAR yes 21238741
chr17 39802321 39802327 ETS1 JASPAR yes 54267759
chr17 39802324 39802330 HiNF-A TRANSFAC yes 21238742
chr17 39802324 39802330 HiNF-A TRANSFAC yes 54267760
SNP sites on vista24790[chr17:39802138-39802335]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39802175 rs144202782 T G
JUND MAFK SREBF1 TBX20
4874059
chr17 39802314 rs115403640 G A
JUND MAFK RARA
4874060
Genes possibly regulated by vista24790[chr17:39802138-39802335]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39722096 39728310 - KRT9 ENSG00000171403.5 39728310 0.99 1.0 15832 26172
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 41035
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 0.99 1.0 15834 70013
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 1.0 1.0 15835 78956
chr17 39845137 39848920 + EIF1 ENSG00000173812.6 39845137 0.55 1.0 15837 57198
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 33757
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 11439
Expression level of Genes
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miRNAs possibly regulated by vista24790[chr17:39802138-39802335]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results