EnhancerDB
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  3. vista2480[chr1:93773027-93773315]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2480[chr1:93773027-93773315]
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Tissue distribution of vista2480
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Transcription factor that possibly regulate vista2480[chr1:93773027-93773315]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 93773039 93773050 FLI1 JASPAR yes 118329819
chr1 93773040 93773050 ETV6 JASPAR yes 118329820
chr1 93773040 93773053 ELF1 JASPAR yes 118329821
chr1 93773041 93773048 SPI1 JASPAR yes 118329822
chr1 93773041 93773049 EHF JASPAR yes 118329823
chr1 93773043 93773050 SPIB JASPAR yes 118329824
chr1 93773063 93773067 H1TF2 TRANSFAC yes 118329825
chr1 93773063 93773067 NFE TRANSFAC yes 118329826
chr1 93773063 93773067 SRF TRANSFAC yes 118329827
chr1 93773070 93773081 NRL JASPAR yes 118329828
chr1 93773091 93773103 POU2F1 JASPAR yes 118329829
chr1 93773091 93773105 POU1F1 JASPAR yes 118329830
chr1 93773091 93773106 FOXP1 JASPAR yes 118329831
chr1 93773092 93773104 POU3F1 JASPAR yes 118329832
chr1 93773092 93773105 POU2F2 JASPAR yes 118329833
chr1 93773093 93773101 FOXL1 JASPAR yes 118329834
chr1 93773093 93773102 POU5F1B JASPAR yes 118329835
chr1 93773097 93773103 TBP TRANSFAC yes 118329836
chr1 93773109 93773115 JUN TRANSFAC yes 118329837
chr1 93773123 93773139 T JASPAR yes 118329838
chr1 93773133 93773141 MEIS2 JASPAR yes 118329839
chr1 93773133 93773141 MEIS3 JASPAR yes 118329840
chr1 93773134 93773146 PKNOX1 JASPAR yes 118329841
chr1 93773134 93773146 PKNOX2 JASPAR yes 118329842
chr1 93773134 93773146 TGIF1 JASPAR yes 118329843
chr1 93773134 93773146 TGIF2 JASPAR yes 118329844
chr1 93773139 93773151 GLI2 JASPAR yes 118329845
chr1 93773139 93773151 ZBTB7B JASPAR yes 118329846
chr1 93773139 93773151 ZBTB7C JASPAR yes 118329847
chr1 93773150 93773170 ESR1 JASPAR yes 118329848
chr1 93773152 93773170 MAFF JASPAR yes 118329849
chr1 93773155 93773170 ESR2 JASPAR yes 118329850
chr1 93773164 93773181 PAX9 JASPAR yes 118329851
chr1 93773165 93773184 PAX5 JASPAR yes 118329852
chr1 93773188 93773194 YY1 JASPAR yes 118329853
chr1 93773191 93773201 POU6F2 JASPAR yes 118329854
chr1 93773192 93773202 HOXB2 JASPAR yes 118329855
chr1 93773192 93773202 HOXB3 JASPAR yes 118329856
chr1 93773192 93773202 MNX1 JASPAR yes 118329857
chr1 93773193 93773201 LBX1 JASPAR yes 118329858
chr1 93773193 93773201 PDX1 JASPAR yes 118329859
chr1 93773193 93773201 VAX1 JASPAR yes 118329860
chr1 93773193 93773201 VAX2 JASPAR yes 118329861
chr1 93773193 93773201 VSX1 JASPAR yes 118329862
chr1 93773193 93773201 VSX2 JASPAR yes 118329863
chr1 93773198 93773202 YY1 TRANSFAC yes 118329864
chr1 93773199 93773209 NFATC3 JASPAR yes 118329865
chr1 93773200 93773207 NFATC2 JASPAR yes 118329866
chr1 93773208 93773216 GATA3 JASPAR yes 118329867
chr1 93773246 93773261 FOXP1 JASPAR yes 118329868
chr1 93773246 93773261 MEF2C JASPAR yes 118329869
chr1 93773246 93773267 IRF1 JASPAR yes 118329870
chr1 93773248 93773260 MEF2A JASPAR yes 118329871
chr1 93773251 93773263 IRF1 JASPAR yes 118329872
chr1 93773257 93773272 RUNX2 JASPAR yes 118329873
chr1 93773269 93773283 RORA JASPAR yes 118329874
chr1 93773277 93773288 TBX20 JASPAR yes 118329875
chr1 93773277 93773288 TBX2 JASPAR yes 118329876
chr1 93773278 93773288 TBX21 JASPAR yes 118329877
chr1 93773279 93773282 MYB TRANSFAC yes 118329878
chr1 93773294 93773304 NFATC3 JASPAR yes 118329879
chr1 93773295 93773302 NFATC2 JASPAR yes 118329880
SNP sites on vista2480[chr1:93773027-93773315]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 93773098 rs200760776 T TA
FOXL1 FOXP1 POU1F1 POU2F1 POU2F2 POU3F1 POU5F1B TBP
487423
chr1 93773174 rs116779173 T C
PAX5 PAX9
487424
chr1 93773223 rs138647453 C T no 487425
chr1 93773292 rs182980860 A G no 487426
Genes possibly regulated by vista2480[chr1:93773027-93773315]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 93811445 93835055 + DR1 ENSG00000117505.8 93811445 0.8 0.99 905 61870
Expression level of Genes
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miRNAs possibly regulated by vista2480[chr1:93773027-93773315]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results