EnhancerDB
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  3. vista24800[chr17:39835188-39835696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24800[chr17:39835188-39835696]
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Tissue distribution of vista24800
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Transcription factor that possibly regulate vista24800[chr17:39835188-39835696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39834001 39835444 POLR2A UCSC Txn Factor no Conserved 108259514
chr17 39834508 39835231 PML UCSC Txn Factor no Conserved 108259519
chr17 39834530 39835205 TAF7 UCSC Txn Factor no Conserved 108259521
chr17 39834576 39835188 BCLAF1 UCSC Txn Factor no Conserved 108259523
chr17 39834800 39835256 GTF2F1 UCSC Txn Factor no Conserved 108259543
chr17 39834858 39835234 TBP UCSC Txn Factor no Conserved 108259550
chr17 39835069 39835613 IRF1 UCSC Txn Factor no Conserved 108259574
chr17 39835096 39835347 POU2F2 UCSC Txn Factor no Conserved 108259575
chr17 39835230 39835612 STAT1 UCSC Txn Factor no Conserved 108259586
chr17 39835273 39835555 STAT3 UCSC Txn Factor no Conserved 108259593
chr17 39835308 39835743 RUNX3 UCSC Txn Factor no Conserved 108259598
chr17 39835310 39835705 EP300 UCSC Txn Factor no Conserved 108259601
chr17 39835399 39835829 CTCF UCSC Txn Factor no Conserved 108259615
chr17 39835428 39835765 NR2F2 UCSC Txn Factor no Conserved 108259623
chr17 39835516 39835745 TEAD4 UCSC Txn Factor no Conserved 108259645
chr17 39835182 39835199 BCL6B JASPAR yes 21239426
chr17 39835182 39835199 BCL6B JASPAR yes 54272528
chr17 39835184 39835188 H4TF2 TRANSFAC yes 21239427
chr17 39835184 39835188 H4TF2 TRANSFAC yes 54272529
chr17 39835186 39835192 MZF1 JASPAR yes 21239428
chr17 39835186 39835192 MZF1 JASPAR yes 54272530
chr17 39835192 39835204 YY1 JASPAR yes 21239429
chr17 39835192 39835204 YY1 JASPAR yes 54272531
chr17 39835220 39835234 ONECUT1 JASPAR yes 21239430
chr17 39835220 39835234 ONECUT2 JASPAR yes 21239431
chr17 39835220 39835234 ONECUT3 JASPAR yes 21239432
chr17 39835220 39835234 ONECUT1 JASPAR yes 54272532
chr17 39835220 39835234 ONECUT2 JASPAR yes 54272533
chr17 39835220 39835234 ONECUT3 JASPAR yes 54272534
chr17 39835223 39835233 CUX1 JASPAR yes 21239433
chr17 39835223 39835233 CUX2 JASPAR yes 21239434
chr17 39835223 39835233 CUX1 JASPAR yes 54272535
chr17 39835223 39835233 CUX2 JASPAR yes 54272536
chr17 39835228 39835240 POU2F1 JASPAR yes 21239435
chr17 39835228 39835240 POU2F1 JASPAR yes 54272537
chr17 39835228 39835241 POU3F3 JASPAR yes 21239436
chr17 39835228 39835241 POU3F3 JASPAR yes 54272538
chr17 39835228 39835242 POU1F1 JASPAR yes 21239437
chr17 39835228 39835242 POU1F1 JASPAR yes 54272539
chr17 39835229 39835241 POU3F1 JASPAR yes 21239438
chr17 39835229 39835241 POU3F2 JASPAR yes 21239439
chr17 39835229 39835241 POU3F1 JASPAR yes 54272540
chr17 39835229 39835241 POU3F2 JASPAR yes 54272541
chr17 39835229 39835242 POU2F2 JASPAR yes 21239440
chr17 39835229 39835242 POU2F2 JASPAR yes 54272542
chr17 39835230 39835239 POU3F4 JASPAR yes 21239441
chr17 39835230 39835239 POU5F1B JASPAR yes 21239442
chr17 39835230 39835239 POU3F4 JASPAR yes 54272543
chr17 39835230 39835239 POU5F1B JASPAR yes 54272544
chr17 39835230 39835251 IRF1 JASPAR yes 21239443
chr17 39835230 39835251 IRF1 JASPAR yes 54272545
chr17 39835232 39835247 IRF9 JASPAR yes 21239444
chr17 39835232 39835247 IRF9 JASPAR yes 54272546
chr17 39835233 39835247 IRF7 JASPAR yes 21239445
chr17 39835233 39835247 IRF8 JASPAR yes 21239446
chr17 39835233 39835247 IRF7 JASPAR yes 54272547
chr17 39835233 39835247 IRF8 JASPAR yes 54272548
chr17 39835234 39835248 STAT1 JASPAR yes 21239447
chr17 39835234 39835248 STAT1 JASPAR yes 54272549
chr17 39835234 39835249 STAT2 JASPAR yes 21239448
chr17 39835234 39835249 STAT2 JASPAR yes 54272550
chr17 39835234 39835252 IRF2 JASPAR yes 21239449
chr17 39835234 39835252 IRF2 JASPAR yes 54272551
chr17 39835235 39835247 IRF1 JASPAR yes 21239450
chr17 39835235 39835247 IRF1 JASPAR yes 54272552
chr17 39835236 39835257 IRF1 JASPAR yes 21239451
chr17 39835236 39835257 IRF1 JASPAR yes 54272553
chr17 39835238 39835253 IRF9 JASPAR yes 21239452
chr17 39835238 39835253 IRF9 JASPAR yes 54272554
chr17 39835239 39835253 IRF7 JASPAR yes 21239453
chr17 39835239 39835253 IRF7 JASPAR yes 54272555
chr17 39835240 39835255 PRDM1 JASPAR yes 21239454
chr17 39835240 39835255 PRDM1 JASPAR yes 54272556
chr17 39835240 39835258 IRF2 JASPAR yes 21239455
chr17 39835240 39835258 IRF2 JASPAR yes 54272557
chr17 39835279 39835283 ESR1 TRANSFAC yes 21239456
chr17 39835279 39835283 ESR1 TRANSFAC yes 54272558
chr17 39835321 39835334 ELF1 JASPAR yes 21239457
chr17 39835321 39835334 ELF1 JASPAR yes 54272559
chr17 39835322 39835334 EHF JASPAR yes 21239458
chr17 39835322 39835334 ELF1 JASPAR yes 21239459
chr17 39835322 39835334 ELF4 JASPAR yes 21239460
chr17 39835322 39835334 EHF JASPAR yes 54272560
chr17 39835322 39835334 ELF1 JASPAR yes 54272561
chr17 39835322 39835334 ELF4 JASPAR yes 54272562
chr17 39835324 39835331 ETS1 TRANSFAC yes 21239461
chr17 39835324 39835331 ETS1 TRANSFAC yes 54272563
chr17 39835324 39835335 ELK4 JASPAR yes 21239462
chr17 39835324 39835335 ELK4 JASPAR yes 54272564
chr17 39835325 39835333 EHF JASPAR yes 21239463
chr17 39835325 39835333 FEV JASPAR yes 21239464
chr17 39835325 39835333 EHF JASPAR yes 54272565
chr17 39835325 39835333 FEV JASPAR yes 54272566
chr17 39835326 39835333 SPI1 JASPAR yes 21239465
chr17 39835326 39835333 SPI1 JASPAR yes 54272567
chr17 39835339 39835355 E2F2 JASPAR yes 21239466
chr17 39835339 39835355 E2F2 JASPAR yes 54272568
chr17 39835343 39835347 LFA1 TRANSFAC yes 21239467
chr17 39835343 39835347 LFA1 TRANSFAC yes 54272569
chr17 39835354 39835360 TCF4 TRANSFAC yes 21239468
chr17 39835354 39835360 TCF4 TRANSFAC yes 54272570
chr17 39835365 39835370 GATA2 JASPAR yes 21239469
chr17 39835365 39835370 GATA2 JASPAR yes 54272571
chr17 39835365 39835380 STAT2 JASPAR yes 21239470
chr17 39835365 39835380 STAT2 JASPAR yes 54272572
chr17 39835382 39835388 PEA3 TRANSFAC yes 21239471
chr17 39835382 39835388 PEA3 TRANSFAC yes 54272573
chr17 39835385 39835398 POU2F2 JASPAR yes 21239472
chr17 39835385 39835398 POU2F2 JASPAR yes 54272574
chr17 39835393 39835397 YY1 TRANSFAC yes 21239473
chr17 39835393 39835397 YY1 TRANSFAC yes 54272575
chr17 39835398 39835413 STAT1 JASPAR yes 21239474
chr17 39835398 39835413 STAT1 JASPAR yes 54272576
chr17 39835400 39835411 STAT1 JASPAR yes 21239475
chr17 39835400 39835411 STAT3 JASPAR yes 21239476
chr17 39835400 39835411 STAT1 JASPAR yes 54272577
chr17 39835400 39835411 STAT3 JASPAR yes 54272578
chr17 39835401 39835409 STAT6 TRANSFAC yes 21239477
chr17 39835401 39835409 STAT6 TRANSFAC yes 54272579
chr17 39835441 39835451 GABPA JASPAR yes 21239478
chr17 39835441 39835451 GABPA JASPAR yes 54272580
chr17 39835441 39835455 SPIC JASPAR yes 21239479
chr17 39835441 39835455 SPIC JASPAR yes 54272581
chr17 39835444 39835449 ETS2 TRANSFAC yes 21239480
chr17 39835444 39835449 ETS2 TRANSFAC yes 54272582
chr17 39835447 39835467 RREB1 JASPAR yes 21239481
chr17 39835447 39835467 RREB1 JASPAR yes 54272583
chr17 39835448 39835468 RREB1 JASPAR yes 21239482
chr17 39835448 39835468 RREB1 JASPAR yes 54272584
chr17 39835454 39835469 RUNX2 JASPAR yes 21239483
chr17 39835454 39835469 RUNX2 JASPAR yes 54272585
chr17 39835457 39835468 RUNX1 JASPAR yes 21239484
chr17 39835457 39835468 RUNX1 JASPAR yes 54272586
chr17 39835458 39835468 RUNX3 JASPAR yes 21239485
chr17 39835458 39835468 RUNX3 JASPAR yes 54272587
chr17 39835459 39835468 RUNX2 JASPAR yes 21239486
chr17 39835459 39835468 RUNX2 JASPAR yes 54272588
chr17 39835465 39835476 ELK4 JASPAR yes 21239487
chr17 39835465 39835476 ELK4 JASPAR yes 54272589
chr17 39835466 39835476 ELK1 JASPAR yes 21239488
chr17 39835466 39835476 ELK3 JASPAR yes 21239489
chr17 39835466 39835476 ETS1 JASPAR yes 21239490
chr17 39835466 39835476 ETV1 JASPAR yes 21239491
chr17 39835466 39835476 ETV4 JASPAR yes 21239492
chr17 39835466 39835476 FEV JASPAR yes 21239493
chr17 39835466 39835476 FLI1 JASPAR yes 21239494
chr17 39835466 39835476 ELK1 JASPAR yes 54272590
chr17 39835466 39835476 ELK3 JASPAR yes 54272591
chr17 39835466 39835476 ETS1 JASPAR yes 54272592
chr17 39835466 39835476 ETV1 JASPAR yes 54272593
chr17 39835466 39835476 ETV4 JASPAR yes 54272594
chr17 39835466 39835476 FEV JASPAR yes 54272595
chr17 39835466 39835476 FLI1 JASPAR yes 54272596
chr17 39835466 39835477 ETV2 JASPAR yes 21239495
chr17 39835466 39835477 ETV2 JASPAR yes 54272597
chr17 39835466 39835479 ELF1 JASPAR yes 21239496
chr17 39835466 39835479 ELF1 JASPAR yes 54272598
chr17 39835467 39835476 ELK4 JASPAR yes 21239497
chr17 39835467 39835476 ELK4 JASPAR yes 54272599
chr17 39835468 39835474 ETS1 JASPAR yes 21239498
chr17 39835468 39835474 SPI1 JASPAR yes 21239499
chr17 39835468 39835474 ETS1 JASPAR yes 54272600
chr17 39835468 39835474 SPI1 JASPAR yes 54272601
chr17 39835468 39835478 ELK1 JASPAR yes 21239500
chr17 39835468 39835478 ELK1 JASPAR yes 54272602
chr17 39835489 39835498 SRY JASPAR yes 21239501
chr17 39835489 39835498 SRY JASPAR yes 54272603
chr17 39835489 39835501 MYBL1 JASPAR yes 21239502
chr17 39835489 39835501 MYBL1 JASPAR yes 54272604
chr17 39835491 39835503 PKNOX1 JASPAR yes 21239503
chr17 39835491 39835503 PKNOX1 JASPAR yes 54272605
chr17 39835494 39835497 MYB TRANSFAC yes 21239504
chr17 39835494 39835497 MYB TRANSFAC yes 54272606
chr17 39835497 39835501 NFE TRANSFAC yes 21239505
chr17 39835497 39835501 NFE TRANSFAC yes 54272607
chr17 39835510 39835515 SP1 TRANSFAC yes 21239506
chr17 39835510 39835515 SP1 TRANSFAC yes 54272608
chr17 39835541 39835545 TEAD2 TRANSFAC yes 21239507
chr17 39835541 39835545 TEAD2 TRANSFAC yes 54272609
chr17 39835542 39835552 POU6F2 JASPAR yes 21239508
chr17 39835542 39835552 POU6F2 JASPAR yes 54272610
chr17 39835543 39835554 PHOX2A JASPAR yes 21239509
chr17 39835543 39835554 PROP1 JASPAR yes 21239510
chr17 39835543 39835554 PHOX2A JASPAR yes 54272611
chr17 39835543 39835554 PROP1 JASPAR yes 54272612
chr17 39835555 39835572 RARA JASPAR yes 21239511
chr17 39835555 39835572 RARA JASPAR yes 54272613
chr17 39835563 39835576 NR2F1 JASPAR yes 21239512
chr17 39835563 39835576 NR2F1 JASPAR yes 54272614
chr17 39835567 39835571 ESR1 TRANSFAC yes 21239513
chr17 39835567 39835571 ESR1 TRANSFAC yes 54272615
chr17 39835591 39835609 TP53 JASPAR yes 21239514
chr17 39835591 39835609 TP53 JASPAR yes 54272616
chr17 39835593 39835608 TP53 JASPAR yes 21239515
chr17 39835593 39835608 TP53 JASPAR yes 54272617
chr17 39835609 39835628 CTCF JASPAR yes 21239516
chr17 39835609 39835628 CTCF JASPAR yes 54272618
chr17 39835610 39835614 ESR1 TRANSFAC yes 21239517
chr17 39835610 39835614 ESR1 TRANSFAC yes 54272619
chr17 39835615 39835625 MZF1 JASPAR yes 21239518
chr17 39835615 39835625 MZF1 JASPAR yes 54272620
chr17 39835625 39835638 NR2F1 JASPAR yes 21239519
chr17 39835625 39835638 NR2F1 JASPAR yes 54272621
chr17 39835629 39835637 CREB1 JASPAR yes 21239520
chr17 39835629 39835637 CREB1 JASPAR yes 54272622
chr17 39835637 39835648 SPDEF JASPAR yes 21239521
chr17 39835637 39835648 SPDEF JASPAR yes 54272623
chr17 39835652 39835666 GATA2 JASPAR yes 21239522
chr17 39835652 39835666 GATA2 JASPAR yes 54272624
chr17 39835654 39835662 GATA3 JASPAR yes 21239523
chr17 39835654 39835662 GATA3 JASPAR yes 54272625
chr17 39835690 39835705 ESR2 JASPAR yes 21239524
chr17 39835690 39835705 ESR2 JASPAR yes 54272626
SNP sites on vista24800[chr17:39835188-39835696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39835233 rs74435760 T A,C,G
CUX1 CUX2 GTF2F1 IRF1 IRF7 IRF8 IRF9 ONECUT1 ONECUT2 ONECUT3 POLR2A POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B STAT1 TBP
4874590
chr17 39835370 rs77451392 A G
EP300 GATA2 IRF1 POLR2A RUNX3 STAT1 STAT2 STAT3
4874591
chr17 39835374 rs537352309 A C
EP300 IRF1 POLR2A RUNX3 STAT1 STAT2 STAT3
4874592
chr17 39835555 rs145021570 G A
CTCF EP300 IRF1 NR2F2 RARA RUNX3 STAT1 STAT3 TEAD4
4874593
Genes possibly regulated by vista24800[chr17:39835188-39835696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 7985
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 0.99 1.0 15834 36963
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 1.0 1.0 15835 45906
chr17 39845137 39848920 + EIF1 ENSG00000173812.6 39845137 0.55 1.0 15837 90559
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 67118
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 44800
Expression level of Genes
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miRNAs possibly regulated by vista24800[chr17:39835188-39835696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results