EnhancerDB
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  3. vista24802[chr17:39949116-39949497]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24802[chr17:39949116-39949497]
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Tissue distribution of vista24802
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Transcription factor that possibly regulate vista24802[chr17:39949116-39949497]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39949119 39949374 EGR1 UCSC Txn Factor no Conserved 108259690
chr17 39949214 39949335 TEAD4 UCSC Txn Factor no Conserved 108259705
chr17 39949105 39949116 E2F6 JASPAR yes 21239565
chr17 39949105 39949116 E2F6 JASPAR yes 54276370
chr17 39949107 39949128 ZNF263 JASPAR yes 21239566
chr17 39949107 39949128 ZNF263 JASPAR yes 54276371
chr17 39949118 39949123 TFAP2A TRANSFAC yes 21239567
chr17 39949118 39949123 TFAP2A TRANSFAC yes 54276372
chr17 39949118 39949124 MZF1 JASPAR yes 21239568
chr17 39949118 39949124 MZF1 JASPAR yes 54276373
chr17 39949158 39949168 SP1 JASPAR yes 21239569
chr17 39949158 39949168 SP1 JASPAR yes 54276374
chr17 39949160 39949166 MAZ TRANSFAC yes 21239570
chr17 39949160 39949166 MAZ TRANSFAC yes 54276375
chr17 39949164 39949169 SP1 TRANSFAC yes 21239571
chr17 39949164 39949169 SP1 TRANSFAC yes 54276376
chr17 39949166 39949181 TFAP2A JASPAR yes 21239572
chr17 39949166 39949181 TFAP2A JASPAR yes 54276377
chr17 39949183 39949192 THAP1 JASPAR yes 21239573
chr17 39949183 39949192 THAP1 JASPAR yes 54276378
chr17 39949196 39949200 H4TF2 TRANSFAC yes 21239574
chr17 39949196 39949200 H4TF2 TRANSFAC yes 54276379
chr17 39949215 39949225 HOXD13 JASPAR yes 21239575
chr17 39949215 39949225 HOXD13 JASPAR yes 54276380
chr17 39949215 39949226 HOXA10 JASPAR yes 21239576
chr17 39949215 39949226 HOXA10 JASPAR yes 54276381
chr17 39949216 39949226 ALX3 JASPAR yes 21239577
chr17 39949216 39949226 GSX1 JASPAR yes 21239578
chr17 39949216 39949226 GSX2 JASPAR yes 21239579
chr17 39949216 39949226 HOXB2 JASPAR yes 21239580
chr17 39949216 39949226 HOXB3 JASPAR yes 21239581
chr17 39949216 39949226 MEOX2 JASPAR yes 21239582
chr17 39949216 39949226 MIXL1 JASPAR yes 21239583
chr17 39949216 39949226 MNX1 JASPAR yes 21239584
chr17 39949216 39949226 ALX3 JASPAR yes 54276382
chr17 39949216 39949226 GSX1 JASPAR yes 54276383
chr17 39949216 39949226 GSX2 JASPAR yes 54276384
chr17 39949216 39949226 HOXB2 JASPAR yes 54276385
chr17 39949216 39949226 HOXB3 JASPAR yes 54276386
chr17 39949216 39949226 MEOX2 JASPAR yes 54276387
chr17 39949216 39949226 MIXL1 JASPAR yes 54276388
chr17 39949216 39949226 MNX1 JASPAR yes 54276389
chr17 39949217 39949225 LMX1A JASPAR yes 21239585
chr17 39949217 39949225 LMX1B JASPAR yes 21239586
chr17 39949217 39949225 NKX6-1 JASPAR yes 21239587
chr17 39949217 39949225 NKX6-2 JASPAR yes 21239588
chr17 39949217 39949225 PDX1 JASPAR yes 21239589
chr17 39949217 39949225 VAX1 JASPAR yes 21239590
chr17 39949217 39949225 VAX2 JASPAR yes 21239591
chr17 39949217 39949225 VSX1 JASPAR yes 21239592
chr17 39949217 39949225 LMX1A JASPAR yes 54276390
chr17 39949217 39949225 LMX1B JASPAR yes 54276391
chr17 39949217 39949225 NKX6-1 JASPAR yes 54276392
chr17 39949217 39949225 NKX6-2 JASPAR yes 54276393
chr17 39949217 39949225 PDX1 JASPAR yes 54276394
chr17 39949217 39949225 VAX1 JASPAR yes 54276395
chr17 39949217 39949225 VAX2 JASPAR yes 54276396
chr17 39949217 39949225 VSX1 JASPAR yes 54276397
chr17 39949220 39949233 ZBTB18 JASPAR yes 21239593
chr17 39949220 39949233 ZBTB18 JASPAR yes 54276398
chr17 39949251 39949271 RREB1 JASPAR yes 21239594
chr17 39949251 39949271 RREB1 JASPAR yes 54276399
chr17 39949260 39949270 SP1 JASPAR yes 21239595
chr17 39949260 39949270 SP1 JASPAR yes 54276400
chr17 39949263 39949268 SP1 TRANSFAC yes 21239596
chr17 39949263 39949268 SP1 TRANSFAC yes 54276401
chr17 39949265 39949270 TFAP2A TRANSFAC yes 21239597
chr17 39949265 39949270 TFAP2A TRANSFAC yes 54276402
chr17 39949265 39949271 MZF1 JASPAR yes 21239598
chr17 39949265 39949271 MZF1 JASPAR yes 54276403
chr17 39949270 39949280 TEAD1 JASPAR yes 21239599
chr17 39949270 39949280 TEAD4 JASPAR yes 21239600
chr17 39949270 39949280 TEAD1 JASPAR yes 54276404
chr17 39949270 39949280 TEAD4 JASPAR yes 54276405
chr17 39949271 39949279 TEAD3 JASPAR yes 21239601
chr17 39949271 39949279 TEAD3 JASPAR yes 54276406
chr17 39949280 39949295 FOXP1 JASPAR yes 21239602
chr17 39949280 39949295 FOXP1 JASPAR yes 54276407
chr17 39949282 39949287 ETS2 TRANSFAC yes 21239603
chr17 39949282 39949287 ETS2 TRANSFAC yes 54276408
chr17 39949283 39949294 FOXP2 JASPAR yes 21239604
chr17 39949283 39949294 FOXP2 JASPAR yes 54276409
chr17 39949284 39949292 FOXO3 JASPAR yes 21239605
chr17 39949284 39949292 FOXO3 JASPAR yes 54276410
chr17 39949295 39949310 FOXP1 JASPAR yes 21239606
chr17 39949295 39949310 FOXP1 JASPAR yes 54276411
chr17 39949298 39949309 FOXP2 JASPAR yes 21239607
chr17 39949298 39949309 FOXP2 JASPAR yes 54276412
chr17 39949308 39949314 GATA3 JASPAR yes 21239608
chr17 39949308 39949314 GATA3 JASPAR yes 54276413
chr17 39949317 39949332 MEF2C JASPAR yes 21239609
chr17 39949317 39949332 MEF2C JASPAR yes 54276414
chr17 39949318 39949333 MEF2A JASPAR yes 21239610
chr17 39949318 39949333 MEF2A JASPAR yes 54276415
chr17 39949328 39949345 RARA JASPAR yes 21239611
chr17 39949328 39949345 RARA JASPAR yes 54276416
chr17 39949332 39949350 ESR2 JASPAR yes 21239612
chr17 39949332 39949350 ESR2 JASPAR yes 54276417
chr17 39949333 39949353 ESR1 JASPAR yes 21239613
chr17 39949333 39949353 ESR1 JASPAR yes 54276418
chr17 39949341 39949352 NFE2L2 JASPAR yes 21239614
chr17 39949341 39949352 NFE2L2 JASPAR yes 54276419
chr17 39949344 39949350 GATA3 JASPAR yes 21239615
chr17 39949344 39949350 GATA3 JASPAR yes 54276420
chr17 39949358 39949379 ZNF263 JASPAR yes 21239616
chr17 39949358 39949379 ZNF263 JASPAR yes 54276421
chr17 39949364 39949385 ZNF263 JASPAR yes 21239617
chr17 39949364 39949385 ZNF263 JASPAR yes 54276422
chr17 39949366 39949377 E2F6 JASPAR yes 21239618
chr17 39949366 39949377 E2F6 JASPAR yes 54276423
chr17 39949368 39949389 ZNF263 JASPAR yes 21239619
chr17 39949368 39949389 ZNF263 JASPAR yes 54276424
chr17 39949381 39949388 CEBPA TRANSFAC yes 21239620
chr17 39949381 39949388 CEBPA TRANSFAC yes 54276425
chr17 39949390 39949394 NFE TRANSFAC yes 21239621
chr17 39949390 39949394 NFE TRANSFAC yes 54276426
chr17 39949400 39949411 EBF1 JASPAR yes 21239622
chr17 39949400 39949411 EBF1 JASPAR yes 54276427
chr17 39949415 39949419 NFE TRANSFAC yes 21239623
chr17 39949415 39949419 NFE TRANSFAC yes 54276428
chr17 39949425 39949431 NFE2 TRANSFAC yes 21239624
chr17 39949425 39949431 NFE2 TRANSFAC yes 54276429
chr17 39949428 39949434 SP1 TRANSFAC yes 21239625
chr17 39949428 39949434 SP1 TRANSFAC yes 54276430
SNP sites on vista24802[chr17:39949116-39949497]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39949130 rs546606674 A T
EGR1
4875335
chr17 39949407 rs182350003 A G
EBF1
4875336
chr17 39949413 rs566924642 T C no 4875337
Genes possibly regulated by vista24802[chr17:39949116-39949497]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39775692 39943183 - JUP ENSG00000173801.12 39943183 0.82 1.0 15836 94067
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 19462
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 41780
chr17 39958199 39968856 - LEPREL4 ENSG00000141696.8 39968856 0.82 1.0 15840 80641
chr17 39968932 39979465 + FKBP10 ENSG00000141756.14 39968932 0.87 1.0 15841 80565
chr17 39981335 39992523 - NT5C3B ENSG00000141698.12 39992523 0.7 1.0 15842 56974
chr17 39991937 40004636 + KLHL10 ENSG00000161594.6 39991937 0.81 0.99 15843 57560
chr17 40009797 40021684 - KLHL11 ENSG00000178502.5 40021684 0.65 0.99 15844 27813
Expression level of Genes
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miRNAs possibly regulated by vista24802[chr17:39949116-39949497]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results