EnhancerDB
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  3. vista24804[chr17:39956975-39957353]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24804[chr17:39956975-39957353]
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Tissue distribution of vista24804
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Transcription factor that possibly regulate vista24804[chr17:39956975-39957353]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39956989 39957000 NRF1 JASPAR yes 21239665
chr17 39956989 39957000 NRF1 JASPAR yes 54277601
chr17 39957000 39957018 TP53 JASPAR yes 21239666
chr17 39957000 39957018 TP53 JASPAR yes 54277602
chr17 39957002 39957017 RUNX2 JASPAR yes 21239667
chr17 39957002 39957017 RUNX2 JASPAR yes 54277603
chr17 39957022 39957028 MZF1 JASPAR yes 21239668
chr17 39957022 39957028 MZF1 JASPAR yes 54277604
chr17 39957044 39957050 SP1 TRANSFAC yes 21239669
chr17 39957044 39957050 SP1 TRANSFAC yes 54277605
chr17 39957044 39957054 SP1 JASPAR yes 21239670
chr17 39957044 39957054 SP1 JASPAR yes 54277606
chr17 39957064 39957081 RARA JASPAR yes 21239671
chr17 39957064 39957081 RARA JASPAR yes 54277607
chr17 39957084 39957100 SOX8 JASPAR yes 21239672
chr17 39957084 39957100 SOX8 JASPAR yes 54277608
chr17 39957086 39957100 PAX6 JASPAR yes 21239673
chr17 39957086 39957100 PAX6 JASPAR yes 54277609
chr17 39957100 39957120 RREB1 JASPAR yes 21239674
chr17 39957100 39957120 RREB1 JASPAR yes 54277610
chr17 39957101 39957111 SP1 JASPAR yes 21239675
chr17 39957101 39957111 SP1 JASPAR yes 54277611
chr17 39957103 39957108 SP1 TRANSFAC yes 21239676
chr17 39957103 39957108 SP1 TRANSFAC yes 54277612
chr17 39957108 39957113 SP1 TRANSFAC yes 21239677
chr17 39957108 39957113 SP1 TRANSFAC yes 54277613
chr17 39957110 39957120 SP1 JASPAR yes 21239678
chr17 39957110 39957120 SP1 JASPAR yes 54277614
chr17 39957110 39957128 ESR1 JASPAR yes 21239679
chr17 39957110 39957128 ESR1 JASPAR yes 54277615
chr17 39957111 39957119 SP1 TRANSFAC yes 21239680
chr17 39957111 39957119 SP1 TRANSFAC yes 54277616
chr17 39957111 39957120 SP1 TRANSFAC yes 21239681
chr17 39957111 39957120 SP1 TRANSFAC yes 54277617
chr17 39957112 39957117 SP1 TRANSFAC yes 21239682
chr17 39957112 39957117 SP1 TRANSFAC yes 54277618
chr17 39957112 39957132 ESR1 JASPAR yes 21239683
chr17 39957112 39957132 ESR1 JASPAR yes 54277619
chr17 39957113 39957118 SP1 TRANSFAC yes 21239684
chr17 39957113 39957118 SP1 TRANSFAC yes 54277620
chr17 39957113 39957119 SP1 TRANSFAC yes 21239685
chr17 39957113 39957119 SP1 TRANSFAC yes 54277621
chr17 39957116 39957121 SP1 TRANSFAC yes 21239686
chr17 39957116 39957121 SP1 TRANSFAC yes 54277622
chr17 39957126 39957136 ID4 JASPAR yes 21239687
chr17 39957126 39957136 TCF3 JASPAR yes 21239688
chr17 39957126 39957136 TCF4 JASPAR yes 21239689
chr17 39957126 39957136 ID4 JASPAR yes 54277623
chr17 39957126 39957136 TCF3 JASPAR yes 54277624
chr17 39957126 39957136 TCF4 JASPAR yes 54277625
chr17 39957128 39957133 USF2 TRANSFAC yes 21239690
chr17 39957128 39957133 USF2 TRANSFAC yes 54277626
chr17 39957135 39957140 SP1 TRANSFAC yes 21239691
chr17 39957135 39957140 SP1 TRANSFAC yes 54277627
chr17 39957139 39957143 ESR1 TRANSFAC yes 21239692
chr17 39957139 39957143 ESR1 TRANSFAC yes 54277628
chr17 39957156 39957169 ZBTB18 JASPAR yes 21239693
chr17 39957156 39957169 ZBTB18 JASPAR yes 54277629
chr17 39957172 39957182 GABPA JASPAR yes 21239694
chr17 39957172 39957182 GABPA JASPAR yes 54277630
chr17 39957174 39957180 ETS1 JASPAR yes 21239695
chr17 39957174 39957180 SPI1 JASPAR yes 21239696
chr17 39957174 39957180 ETS1 JASPAR yes 54277631
chr17 39957174 39957180 SPI1 JASPAR yes 54277632
chr17 39957191 39957197 PEA3 TRANSFAC yes 21239697
chr17 39957191 39957197 PEA3 TRANSFAC yes 54277633
chr17 39957192 39957200 EHF JASPAR yes 21239698
chr17 39957192 39957200 EHF JASPAR yes 54277634
chr17 39957197 39957212 JUND JASPAR yes 21239699
chr17 39957197 39957212 JUND JASPAR yes 54277635
chr17 39957198 39957211 JUN JASPAR yes 21239700
chr17 39957198 39957211 JUN JASPAR yes 54277636
chr17 39957199 39957219 ESR1 JASPAR yes 21239701
chr17 39957199 39957219 ESR1 JASPAR yes 54277637
chr17 39957202 39957210 CREB1 JASPAR yes 21239702
chr17 39957202 39957210 CREB1 JASPAR yes 54277638
chr17 39957202 39957220 ESR1 JASPAR yes 21239703
chr17 39957202 39957220 ESR2 JASPAR yes 21239704
chr17 39957202 39957220 ESR1 JASPAR yes 54277639
chr17 39957202 39957220 ESR2 JASPAR yes 54277640
chr17 39957203 39957211 NR4A2 JASPAR yes 21239705
chr17 39957203 39957211 NR4A2 JASPAR yes 54277641
chr17 39957203 39957221 ESR2 JASPAR yes 21239706
chr17 39957203 39957221 ESR2 JASPAR yes 54277642
chr17 39957204 39957219 ESR2 JASPAR yes 21239707
chr17 39957204 39957219 ESR2 JASPAR yes 54277643
chr17 39957204 39957224 ESR1 JASPAR yes 21239708
chr17 39957204 39957224 ESR1 JASPAR yes 54277644
chr17 39957205 39957209 ESR1 TRANSFAC yes 21239709
chr17 39957205 39957209 ESR1 TRANSFAC yes 54277645
chr17 39957227 39957237 SP1 JASPAR yes 21239710
chr17 39957227 39957237 SP1 JASPAR yes 54277646
chr17 39957236 39957246 NFATC3 JASPAR yes 21239711
chr17 39957236 39957246 NFATC3 JASPAR yes 54277647
chr17 39957237 39957244 NFATC2 JASPAR yes 21239712
chr17 39957237 39957244 NFATC2 JASPAR yes 54277648
chr17 39957255 39957270 NR2C2 JASPAR yes 21239713
chr17 39957255 39957270 NR2C2 JASPAR yes 54277649
chr17 39957273 39957287 TCF7L2 JASPAR yes 21239714
chr17 39957273 39957287 TCF7L2 JASPAR yes 54277650
chr17 39957282 39957297 TFAP2C JASPAR yes 21239715
chr17 39957282 39957297 TFAP2C JASPAR yes 54277651
chr17 39957288 39957298 SP1 JASPAR yes 21239716
chr17 39957288 39957298 SP1 JASPAR yes 54277652
chr17 39957288 39957309 ZNF263 JASPAR yes 21239717
chr17 39957288 39957309 ZNF263 JASPAR yes 54277653
chr17 39957290 39957296 MAZ TRANSFAC yes 21239718
chr17 39957290 39957296 MAZ TRANSFAC yes 54277654
chr17 39957304 39957322 ESR2 JASPAR yes 21239719
chr17 39957304 39957322 ESR2 JASPAR yes 54277655
chr17 39957305 39957320 AR JASPAR yes 21239720
chr17 39957305 39957320 AR JASPAR yes 54277656
chr17 39957305 39957322 NR3C1 JASPAR yes 21239721
chr17 39957305 39957322 NR3C2 JASPAR yes 21239722
chr17 39957305 39957322 NR3C1 JASPAR yes 54277657
chr17 39957305 39957322 NR3C2 JASPAR yes 54277658
chr17 39957312 39957323 NFKB1 JASPAR yes 21239723
chr17 39957312 39957323 NFKB1 JASPAR yes 54277659
chr17 39957318 39957333 RFX5 JASPAR yes 21239724
chr17 39957318 39957333 RFX5 JASPAR yes 54277660
chr17 39957330 39957348 ESR1 JASPAR yes 21239725
chr17 39957330 39957348 ESR1 JASPAR yes 54277661
chr17 39957337 39957358 REST JASPAR yes 21239726
chr17 39957337 39957358 REST JASPAR yes 54277662
chr17 39957338 39957357 REST JASPAR yes 21239727
chr17 39957338 39957357 REST JASPAR yes 54277663
chr17 39957352 39957366 CREB3L1 JASPAR yes 21239728
chr17 39957352 39957366 CREB3L1 JASPAR yes 54277664
chr17 39957353 39957364 USF1 JASPAR yes 21239729
chr17 39957353 39957364 USF2 JASPAR yes 21239730
chr17 39957353 39957364 USF1 JASPAR yes 54277665
chr17 39957353 39957364 USF2 JASPAR yes 54277666
SNP sites on vista24804[chr17:39956975-39957353]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39957005 rs75451837 C A,T
RUNX2 TP53
4875440
chr17 39957022 rs78139258 C T
MZF1
4875441
chr17 39957098 rs117989980 G C
PAX6 SOX8
4875442
chr17 39957151 rs116770791 G A no 4875443
chr17 39957231 rs73305748 C T
SP1
4875444
chr17 39957304 rs74964075 A G
ESR2 ZNF263
4875445
Genes possibly regulated by vista24804[chr17:39956975-39957353]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39775692 39943183 - JUP ENSG00000173801.12 39943183 0.82 1.0 15836 86208
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 11603
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 33921
chr17 39958199 39968856 - LEPREL4 ENSG00000141696.8 39968856 0.82 1.0 15840 88497
chr17 39968932 39979465 + FKBP10 ENSG00000141756.14 39968932 0.87 1.0 15841 88421
chr17 39981335 39992523 - NT5C3B ENSG00000141698.12 39992523 0.7 1.0 15842 64830
chr17 39991937 40004636 + KLHL10 ENSG00000161594.6 39991937 0.81 0.99 15843 65416
chr17 40009797 40021684 - KLHL11 ENSG00000178502.5 40021684 0.65 0.99 15844 35669
Expression level of Genes
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miRNAs possibly regulated by vista24804[chr17:39956975-39957353]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results