EnhancerDB
  1. Home
  2. Enhancers
  3. vista24821[chr17:40608913-40609089]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24821[chr17:40608913-40609089]
Back to top
Tissue distribution of vista24821
Back to top
Transcription factor that possibly regulate vista24821[chr17:40608913-40609089]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 40608563 40609384 POLR2A UCSC Txn Factor no Conserved 108260900
chr17 40608820 40609153 RUNX3 UCSC Txn Factor no Conserved 108260916
chr17 40608881 40609146 CEBPB UCSC Txn Factor no Conserved 108260925
chr17 40608935 40608939 NFE TRANSFAC yes 21240545
chr17 40608957 40608972 RUNX2 JASPAR yes 21240546
chr17 40608959 40608967 HOXA5 JASPAR yes 21240547
chr17 40608960 40608971 RUNX1 JASPAR yes 21240548
chr17 40608961 40608971 RUNX3 JASPAR yes 21240549
chr17 40608962 40608971 RUNX2 JASPAR yes 21240550
chr17 40608973 40608985 NHLH1 JASPAR yes 21240551
chr17 40608974 40608984 NHLH1 JASPAR yes 21240552
chr17 40608987 40609002 HNF1A JASPAR yes 21240553
chr17 40609009 40609016 SPIB JASPAR yes 21240554
chr17 40609010 40609018 EHF JASPAR yes 21240555
chr17 40609013 40609024 FLI1 JASPAR yes 21240556
chr17 40609014 40609019 ETS2 TRANSFAC yes 21240557
chr17 40609014 40609022 FEV JASPAR yes 21240558
chr17 40609024 40609035 CEBPA JASPAR yes 21240559
chr17 40609024 40609036 DBP JASPAR yes 21240560
chr17 40609024 40609036 HLF JASPAR yes 21240561
chr17 40609024 40609036 TEF JASPAR yes 21240562
chr17 40609025 40609035 CEBPB JASPAR yes 21240563
chr17 40609025 40609035 CEBPD JASPAR yes 21240564
chr17 40609025 40609035 CEBPE JASPAR yes 21240565
chr17 40609025 40609035 CEBPG JASPAR yes 21240566
chr17 40609025 40609036 CEBPB JASPAR yes 21240567
chr17 40609026 40609034 NF-IL6 TRANSFAC yes 21240568
chr17 40609031 40609034 MYB TRANSFAC yes 21240569
chr17 40609044 40609047 MYB TRANSFAC yes 21240570
chr17 40609046 40609056 NFIA JASPAR yes 21240571
chr17 40609048 40609054 NFIC JASPAR yes 21240572
chr17 40609068 40609072 H4TF2 TRANSFAC yes 21240573
chr17 40609077 40609081 NFE TRANSFAC yes 21240574
SNP sites on vista24821[chr17:40608913-40609089]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 40609071 rs138122963 TC T
CEBPB H4TF2 POLR2A RUNX3
4879002
Genes possibly regulated by vista24821[chr17:40608913-40609089]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 40465342 40540586 - STAT3 ENSG00000168610.10 40540586 0.74 0.99 15860 31673
chr17 40554470 40575535 - PTRF ENSG00000177469.12 40575535 0.76 0.99 15861 66622
chr17 40610862 40674629 + ATP6V0A1 ENSG00000033627.10 40610862 0.76 0.99 15862 98227
chr17 40688190 40696467 + NAGLU ENSG00000108784.5 40688190 0.64 0.99 15863 20899
chr17 40701232 40707231 + HSD17B1 ENSG00000108786.6 40701232 0.99 1.0 15864 7857
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24821[chr17:40608913-40609089]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results