EnhancerDB
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  3. vista24822[chr17:40628029-40628344]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24822[chr17:40628029-40628344]
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Tissue distribution of vista24822
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Transcription factor that possibly regulate vista24822[chr17:40628029-40628344]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 40628056 40628062 NFIC JASPAR yes 21240575
chr17 40628056 40628062 NFIC JASPAR yes 54309015
chr17 40628063 40628068 GATA2 JASPAR yes 21240576
chr17 40628063 40628068 GATA2 JASPAR yes 54309016
chr17 40628072 40628087 AR JASPAR yes 21240577
chr17 40628072 40628087 AR JASPAR yes 54309017
chr17 40628075 40628091 SOX8 JASPAR yes 21240578
chr17 40628075 40628091 SOX8 JASPAR yes 54309018
chr17 40628084 40628097 ATF4 JASPAR yes 21240579
chr17 40628084 40628097 ATF4 JASPAR yes 54309019
chr17 40628106 40628117 FOXP2 JASPAR yes 21240580
chr17 40628106 40628117 FOXP2 JASPAR yes 54309020
chr17 40628107 40628115 FOXO3 JASPAR yes 21240581
chr17 40628107 40628115 FOXO3 JASPAR yes 54309021
chr17 40628126 40628136 SREBF2 JASPAR yes 21240582
chr17 40628126 40628136 TFAP4 JASPAR yes 21240583
chr17 40628126 40628136 SREBF2 JASPAR yes 54309022
chr17 40628126 40628136 TFAP4 JASPAR yes 54309023
chr17 40628126 40628137 NRL JASPAR yes 21240584
chr17 40628126 40628137 NRL JASPAR yes 54309024
chr17 40628144 40628165 IRF1 JASPAR yes 21240585
chr17 40628144 40628165 IRF1 JASPAR yes 54309025
chr17 40628146 40628161 IRF9 JASPAR yes 21240586
chr17 40628146 40628161 IRF9 JASPAR yes 54309026
chr17 40628147 40628161 IRF7 JASPAR yes 21240587
chr17 40628147 40628161 IRF8 JASPAR yes 21240588
chr17 40628147 40628161 IRF7 JASPAR yes 54309027
chr17 40628147 40628161 IRF8 JASPAR yes 54309028
chr17 40628148 40628162 SPIC JASPAR yes 21240589
chr17 40628148 40628162 STAT1 JASPAR yes 21240590
chr17 40628148 40628162 SPIC JASPAR yes 54309029
chr17 40628148 40628162 STAT1 JASPAR yes 54309030
chr17 40628148 40628163 STAT2 JASPAR yes 21240591
chr17 40628148 40628163 STAT2 JASPAR yes 54309031
chr17 40628149 40628161 IRF1 JASPAR yes 21240592
chr17 40628149 40628161 IRF1 JASPAR yes 54309032
chr17 40628179 40628182 MYB TRANSFAC yes 21240593
chr17 40628179 40628182 MYB TRANSFAC yes 54309033
chr17 40628190 40628200 HMBOX1 JASPAR yes 21240594
chr17 40628190 40628200 HMBOX1 JASPAR yes 54309034
chr17 40628192 40628195 MYB TRANSFAC yes 21240595
chr17 40628192 40628195 MYB TRANSFAC yes 54309035
chr17 40628202 40628217 JUND JASPAR yes 21240596
chr17 40628202 40628217 JUND JASPAR yes 54309036
chr17 40628203 40628216 JUN JASPAR yes 21240597
chr17 40628203 40628216 JUN JASPAR yes 54309037
chr17 40628205 40628220 JUND JASPAR yes 21240598
chr17 40628205 40628220 JUND JASPAR yes 54309038
chr17 40628223 40628230 NFATC2 JASPAR yes 21240599
chr17 40628223 40628230 NFATC2 JASPAR yes 54309039
chr17 40628227 40628231 H1TF2 TRANSFAC yes 21240600
chr17 40628227 40628231 NFE TRANSFAC yes 21240601
chr17 40628227 40628231 SRF TRANSFAC yes 21240602
chr17 40628227 40628231 H1TF2 TRANSFAC yes 54309040
chr17 40628227 40628231 NFE TRANSFAC yes 54309041
chr17 40628227 40628231 SRF TRANSFAC yes 54309042
chr17 40628242 40628246 YY1 TRANSFAC yes 21240603
chr17 40628242 40628246 YY1 TRANSFAC yes 54309043
chr17 40628283 40628294 DUX4 JASPAR yes 21240604
chr17 40628283 40628294 DUX4 JASPAR yes 54309044
chr17 40628286 40628301 PRDM1 JASPAR yes 21240605
chr17 40628286 40628301 STAT2 JASPAR yes 21240606
chr17 40628286 40628301 PRDM1 JASPAR yes 54309045
chr17 40628286 40628301 STAT2 JASPAR yes 54309046
chr17 40628287 40628301 STAT1 JASPAR yes 21240607
chr17 40628287 40628301 STAT1 JASPAR yes 54309047
chr17 40628294 40628298 YY1 TRANSFAC yes 21240608
chr17 40628294 40628298 YY1 TRANSFAC yes 54309048
SNP sites on vista24822[chr17:40628029-40628344]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 40628089 rs184581537 G T
ATF4 SOX8
4879115
chr17 40628090 rs140060471 T C
ATF4 SOX8
4879116
chr17 40628155 rs373621468 C T
IRF1 IRF7 IRF8 IRF9 SPIC STAT1 STAT2
4879117
Genes possibly regulated by vista24822[chr17:40628029-40628344]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 40465342 40540586 - STAT3 ENSG00000168610.10 40540586 0.74 0.99 15860 12557
chr17 40554470 40575535 - PTRF ENSG00000177469.12 40575535 0.76 0.99 15861 47506
chr17 40610862 40674629 + ATP6V0A1 ENSG00000033627.10 40610862 0.76 0.99 15862 82833
chr17 40688190 40696467 + NAGLU ENSG00000108784.5 40688190 0.64 0.99 15863 40154
chr17 40701232 40707231 + HSD17B1 ENSG00000108786.6 40701232 0.99 1.0 15864 27112
chr17 40713485 40718295 + COASY ENSG00000068120.10 40713485 0.65 1.0 15865 14859
chr17 40719086 40725257 + MLX ENSG00000108788.7 40719086 0.58 1.0 15866 9258
Expression level of Genes
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miRNAs possibly regulated by vista24822[chr17:40628029-40628344]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 40666285 40666306 + hsa-miR-5010-3p MIMAT0021044 40610896 0.0010111223458038423 0.820632 0.0 706
Expression level of miRNAs
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