EnhancerDB
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  3. vista24824[chr17:40671173-40671319]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24824[chr17:40671173-40671319]
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Tissue distribution of vista24824
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Transcription factor that possibly regulate vista24824[chr17:40671173-40671319]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 40671000 40671463 GATA1 UCSC Txn Factor no Conserved 108260983
chr17 40671175 40671181 SP1 TRANSFAC yes 21240653
chr17 40671175 40671181 SP1 TRANSFAC yes 54309818
chr17 40671175 40671185 SP1 JASPAR yes 21240654
chr17 40671175 40671185 SP1 JASPAR yes 54309819
chr17 40671190 40671195 GATA2 JASPAR yes 21240655
chr17 40671190 40671195 GATA2 JASPAR yes 54309820
chr17 40671195 40671208 ELF1 JASPAR yes 21240656
chr17 40671195 40671208 ELF1 JASPAR yes 54309821
chr17 40671224 40671232 GATA3 JASPAR yes 21240657
chr17 40671224 40671232 GATA5 JASPAR yes 21240658
chr17 40671224 40671232 GATA3 JASPAR yes 54309822
chr17 40671224 40671232 GATA5 JASPAR yes 54309823
chr17 40671235 40671249 TLX1 JASPAR yes 21240659
chr17 40671235 40671249 TLX1 JASPAR yes 54309824
chr17 40671242 40671251 NFIX JASPAR yes 21240660
chr17 40671242 40671251 NFIX JASPAR yes 54309825
chr17 40671242 40671252 NFIA JASPAR yes 21240661
chr17 40671242 40671252 NFIA JASPAR yes 54309826
chr17 40671244 40671250 NFIC JASPAR yes 21240662
chr17 40671244 40671250 NFIC JASPAR yes 54309827
chr17 40671254 40671260 SP1 TRANSFAC yes 21240663
chr17 40671254 40671260 SP1 TRANSFAC yes 54309828
chr17 40671255 40671260 SP1 TRANSFAC yes 21240664
chr17 40671255 40671260 SP1 TRANSFAC yes 54309829
chr17 40671263 40671275 TFAP2A JASPAR yes 21240665
chr17 40671263 40671275 TFAP2A JASPAR yes 54309830
chr17 40671273 40671288 FOXP1 JASPAR yes 21240666
chr17 40671273 40671288 FOXP1 JASPAR yes 54309831
chr17 40671276 40671287 FOXP2 JASPAR yes 21240667
chr17 40671276 40671287 FOXP2 JASPAR yes 54309832
chr17 40671277 40671285 FOXO3 JASPAR yes 21240668
chr17 40671277 40671285 FOXO3 JASPAR yes 54309833
chr17 40671278 40671287 SRY JASPAR yes 21240669
chr17 40671278 40671287 SRY JASPAR yes 54309834
chr17 40671282 40671288 SOX10 JASPAR yes 21240670
chr17 40671282 40671288 SOX10 JASPAR yes 54309835
chr17 40671285 40671297 NHLH1 JASPAR yes 21240671
chr17 40671285 40671297 NHLH1 JASPAR yes 54309836
chr17 40671297 40671301 YY1 TRANSFAC yes 21240672
chr17 40671297 40671301 YY1 TRANSFAC yes 54309837
SNP sites on vista24824[chr17:40671173-40671319]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista24824[chr17:40671173-40671319]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 40554470 40575535 - PTRF ENSG00000177469.12 40575535 0.76 0.99 15861 4362
chr17 40610862 40674629 + ATP6V0A1 ENSG00000033627.10 40610862 0.76 0.99 15862 39689
chr17 40688190 40696467 + NAGLU ENSG00000108784.5 40688190 0.64 0.99 15863 83129
chr17 40701232 40707231 + HSD17B1 ENSG00000108786.6 40701232 0.99 1.0 15864 70087
chr17 40713485 40718295 + COASY ENSG00000068120.10 40713485 0.65 1.0 15865 57834
chr17 40719086 40725257 + MLX ENSG00000108788.7 40719086 0.58 1.0 15866 52233
chr17 40724333 40729849 - PSMC3IP ENSG00000131470.10 40729849 0.83 1.0 15867 41470
chr17 40731531 40762641 - FAM134C ENSG00000141699.6 40762641 0.54 1.0 15868 8678
chr17 40761694 40767252 + TUBG1 ENSG00000131462.3 40761694 0.85 1.0 15869 9625
Expression level of Genes
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miRNAs possibly regulated by vista24824[chr17:40671173-40671319]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results